LOCUS       NM_001106297            3004 bp    mRNA    linear   ROD 22-MAR-2023
DEFINITION  Rattus norvegicus Cd2 (cytoplasmic tail) binding protein 2
            (Cd2bp2), mRNA.
ACCESSION   NM_001106297 XM_001078400 XM_215082
VERSION     NM_001106297.2
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
REFERENCE   1  (bases 1 to 3004)
  AUTHORS   Hendrickx A, Beullens M, Ceulemans H, Den Abt T, Van Eynde A,
            Nicolaescu E, Lesage B and Bollen M.
  TITLE     Docking motif-guided mapping of the interactome of protein
            phosphatase-1
  JOURNAL   Chem Biol 16 (4), 365-371 (2009)
   PUBMED   19389623
REFERENCE   2  (bases 1 to 3004)
  AUTHORS   Laggerbauer B, Liu S, Makarov E, Vornlocher HP, Makarova O,
            Ingelfinger D, Achsel T and Luhrmann R.
  TITLE     The human U5 snRNP 52K protein (CD2BP2) interacts with U5-102K
            (hPrp6), a U4/U6.U5 tri-snRNP bridging protein, but dissociates
            upon tri-snRNP formation
  JOURNAL   RNA 11 (5), 598-608 (2005)
   PUBMED   15840814
COMMENT     PROVISIONAL REFSEQ: This record has not yet been subject to final
            NCBI review. The reference sequence was derived from BC168174.1.
            
            On Aug 10, 2008 this sequence version replaced NM_001106297.1.
            
            ##Evidence-Data-START##
            Transcript exon combination :: BC168174.1, SRR8487227.156290.1
                                           [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMN16676806 [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on conservation, expression
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..3004
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /db_xref="taxon:10116"
                     /chromosome="1"
                     /map="1q37"
     gene            1..3004
                     /gene="Cd2bp2"
                     /note="Cd2 (cytoplasmic tail) binding protein 2"
                     /db_xref="GeneID:293505"
                     /db_xref="RGD:1311741"
     exon            1..12
                     /gene="Cd2bp2"
                     /inference="alignment:Splign:2.1.0"
     exon            13..113
                     /gene="Cd2bp2"
                     /inference="alignment:Splign:2.1.0"
     CDS             36..1058
                     /gene="Cd2bp2"
                     /note="CD2 antigen (cytoplasmic tail) binding protein 2"
                     /codon_start=1
                     /product="CD2 antigen cytoplasmic tail-binding protein 2"
                     /protein_id="NP_001099767.1"
                     /db_xref="GeneID:293505"
                     /db_xref="RGD:1311741"
                     /translation="MPKRKVTFQGVGDEDDEDEISVPKKKLVDPVAGAGGPGSRFKGK
                     HSLDSDEEDDDEGSSKYDILASEDVEGQEAATLPSEGGVRITPFNLQEEMEEGHFDAD
                     GNYFLNQDSQIRDSWLDNIDWVRIKERPPDKQQVSDSEEEGSLGQTPMSVQALLEGLL
                     ELLLPRETVAGALRRLGARGGGKGNSKGTGRPNSPQRLDRLSGLADQMVARGNLGVYQ
                     ETRERLAMRLKGLGCRTQGSHDPTPPPSLDMFAEEVTEGELETPTPTHREEADSAGDG
                     LMDVMWEYKWENTGDAELYGPFTSAQMQTWVSEGYFPDGVYCRKLDPPGGQFYNSKRI
                     DFDLYT"
     exon            114..246
                     /gene="Cd2bp2"
                     /inference="alignment:Splign:2.1.0"
     exon            247..404
                     /gene="Cd2bp2"
                     /inference="alignment:Splign:2.1.0"
     exon            405..840
                     /gene="Cd2bp2"
                     /inference="alignment:Splign:2.1.0"
     exon            841..947
                     /gene="Cd2bp2"
                     /inference="alignment:Splign:2.1.0"
     exon            948..2928
                     /gene="Cd2bp2"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 ctggattcct agctggagga aatctattgc caatcatgcc aaagaggaaa gtgacttttc
       61 agggtgttgg agatgaggat gatgaagatg aaatcagtgt tcccaaaaag aagctggtgg
      121 accctgtggc tggagcaggt ggtcctggga gccgcttcaa aggcaaacac tctttagaca
      181 gtgatgaaga ggatgatgac gaggggtcca gcaaatacga tatcctggcc tcagaggatg
      241 tcgaaggtca ggaagcagct actctcccta gtgagggggg tgtgaggatc acacccttca
      301 acctgcagga ggagatggag gaaggccact ttgatgcaga tggcaactat ttcctgaacc
      361 aggattcgca gatccgagac agctggctgg acaacattga ctgggtgagg atcaaggaac
      421 ggccacctga taagcagcag gtttcggact cagaggagga aggcagcctg ggtcagactc
      481 caatgagtgt ccaagccctc ctggagggac ttctggagtt gttactgcca agagagacag
      541 tggctggggc acttaggcgt ctgggggccc gaggaggagg caaagggaac agcaagggga
      601 ctggacggcc caattctccc cagcgtctag accggctatc tgggttggct gatcaaatgg
      661 tggctcgagg caaccttggt gtataccagg aaacaaggga gcgtttggct atgcgactga
      721 agggtttggg gtgtcggacc cagggatccc atgaccccac acctccaccc tccctggaca
      781 tgtttgctga ggaagtaaca gagggggaac tggaaactcc aacccctacc catagagaag
      841 aagcagattc agctggagat ggtctgatgg atgtgatgtg ggagtataaa tgggagaaca
      901 cgggggatgc tgagctgtac ggacccttta ccagtgccca gatgcagacc tgggtgagcg
      961 aaggttactt cccggatggt gtttattgcc ggaagctgga ccctccaggc ggtcagttct
     1021 acaattccaa gcgcattgat tttgatctct acacatgagc ccgctaaggg ccccgtttgg
     1081 cagccccttc tttcttgaac ttggcagagg aggtcccaac tgccctgggc agtgaggata
     1141 ttggaggcca ctctaaagcc agtgtctctt tgtcaataaa agccttgagt atgcatcagg
     1201 gccttgactg ggctaatggc caaaagccaa ggcttctcca tagctccttt tggcttcacc
     1261 tggtgggtcc ttgagtttcc tcccaagaga cttcctctca tgcttctctg gtgtcttgga
     1321 ccacctccgt tttgtttccc accttggagg cagagggagg gcccatcagg tgtcctgtgt
     1381 aaaattccct ctatcactct gttctctgtc atgctgatct tggcttttag gacctcacat
     1441 tctctgccct ggcagctcct ttgtagctgg gacattagga agactttgaa atcctattgg
     1501 gagatcctct taaacatgga ttctcccctt ctccctagtc tggttttact acccctcacc
     1561 ctcctgcagt agtttccata gctcttaggt gaagtatgaa cttggtagca cttcaaggtt
     1621 acttgggcca ccatgtgata cagcgagggg caaagggcag ggacttactg gagacctcac
     1681 agtaaactag agaggtggcc cattcaccta ttccctgacc tttcttggca taagcttttc
     1741 ttgcttagcc tttcaagcat tgtctacatt tcctgggctc ccacgtcttg ggcgtggggc
     1801 tagtgccttg aggaaacctc tggtctggtc cccatgcagg aatccagagt gtgagaggca
     1861 gacagggacc tgacagttct caccccacca gtgctgcttt ctgctcacct tgtctgtaca
     1921 ggaggcccca agagctgcag gctagtgggt ccaggctaag gacttgggaa gtggggttca
     1981 gctcaggctt ggctgcagat gttagatgca gagacttctg acctgtctaa caattagacc
     2041 tgttactgcc agtgtaggga cagatggttt ctttgacttc aagaagccca ttagtggaaa
     2101 gacatctgac ttggtatgtt actaagacag cgataaccct gtagttattt gtaaggtatt
     2161 actggttaaa gaggaaccag ctttctgaga tacttagcag tgaaaacctg gtgtcttggg
     2221 atgagtaaca tccagtcatg ttgcctgact gattgttcac aagtgtttgg tgagagagac
     2281 accgaggtgc cctccaggtt cctcagactt agctgatcta aagctgatct cttcctcatg
     2341 ctctctgagg cacttcctga taatacccag gaagggcaga acatccctga agatacacac
     2401 atctgagccc cagactgggt gaatattact tatgttttat gtggcagagg gaaagtgtag
     2461 gaaagggatt atgtagaagt gacgttgagg tttggtttgg ttttggttgt tttttgtttt
     2521 gttttgtttt gttttttaat tttttgaggt ggggtctcac tgtgtagccc tggctggcct
     2581 gaaactcaca agagatctgc ctccccaagt gttgagacta aaggtgtgtg ccatgatgct
     2641 gagcaaaatt gagaaatttt gagactggga gattaccttt gattattggg accattgtga
     2701 tctcggggtt cttacgctgg aaaaggaact gactcctaac aagatcagag aactgaaagc
     2761 tggaagagag gagtatgtgt cagggtgccg gtggcctgga gagccgggaa ggcagaaggc
     2821 aggtccttcc cagccaagtg tagccccaca ctgataaccc agtgaaaccc actttggact
     2881 tgtaccctct cgaattgtat gataataaat ttgtgtcgag ctgcttaaaa aaaaaaaaaa
     2941 aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa
     3001 aaaa
//
