LOCUS       XM_006248792             886 bp    mRNA    linear   ROD 11-JUN-2023
DEFINITION  PREDICTED: Rattus norvegicus CD209c molecule (Cd209c), mRNA.
ACCESSION   XM_006248792
VERSION     XM_006248792.4
DBLINK      BioProject: PRJNA677964
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_051347.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            [WARNING] On Feb 22, 2024 this sequence was replaced by
            XM_006248792.5.
            
            On Jan 21, 2021 this sequence version replaced XM_006248792.3.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_015227675.2-RS_2023_06
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.1
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 06/06/2023
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 10% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..886
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN/NHsdMcwi"
                     /db_xref="taxon:10116"
                     /chromosome="12"
                     /sex="male"
                     /tissue_type="kidney"
                     /geo_loc_name="USA: Wisconsin, Milwaukee, Medical College
                     of Wisconsin"
                     /collection_date="2019-03-08"
                     /collected_by="Rebecca Schilling"
     gene            1..886
                     /gene="Cd209c"
                     /note="CD209c molecule; Derived by automated computational
                     analysis using gene prediction method: Gnomon. Supporting
                     evidence includes similarity to: 7 Proteins, and 33%
                     coverage of the annotated genomic feature by RNAseq
                     alignments"
                     /db_xref="GeneID:688951"
                     /db_xref="RGD:1582956"
     CDS             1..723
                     /gene="Cd209c"
                     /codon_start=1
                     /product="CD209 antigen-like protein C"
                     /protein_id="XP_006248854.1"
                     /db_xref="GeneID:688951"
                     /db_xref="RGD:1582956"
                     /translation="MGDSEEDRVQQLSSLDEEHLIASSTRYSLQGFRFQPPYILKKAA
                     GYLCHGLVPFVLQLICLTLCAILLLAILIKVSNVAYSQGQEQAKKEKVYQDVAQLKPQ
                     INHLCRPCPWDWTFFQGNCYFFSKFQQNWKDSVTSCRKLGAQLVVVKSDDEQSFLQQT
                     SKEKGYAWMVLSDLKREGIWHWVDGSHLLFSFTKYWNKGEPNNEWEEDCAEFRGDGWN
                     DAPCTNKKYWICKKSALSCTGK"
ORIGIN      
        1 atgggtgact ctgaggaaga cagagtacag caactgagtt ccctggatga ggagcacctg
       61 atagccagca gcaccagata ctccctccaa ggcttcagat ttcaacctcc ctacatcctc
      121 aagaaagctg cagggtatct gtgccatggc cttgttccct tcgtgctgca gctgatctgc
      181 ctcacactct gtgctatcct cctgctggct atccttatca aagtctctaa tgttgcctac
      241 tcccagggac aggaacaggc aaagaaggag aaggtatacc aggatgtggc ccagctgaag
      301 cctcaaataa accatctgtg ccgcccctgc ccctgggact ggacattctt ccaaggaaac
      361 tgttacttct tctccaagtt ccaacagaac tggaaggact ctgtcaccag ctgcagaaaa
      421 ctgggtgctc aactagtggt cgtcaaaagc gacgatgagc agagcttcct gcaacagaca
      481 tctaaagaga aaggctatgc ctggatggtc ctgtcagacc tgaagcgtga aggcatatgg
      541 cactgggtgg acggctcaca tctgctcttc agtttcacga aatattggaa caaaggagag
      601 cccaacaacg aatgggaaga agactgtgcg gagttcagag gcgatggctg gaatgatgcc
      661 ccatgtacaa ataagaaata ctggatctgc aagaagtctg ctctgtcctg cactgggaaa
      721 tgatatgtca tctgtctgca gcacctgttg ccaagatgac cctgcagggt gactgaactt
      781 aacttgcaat ctatgccagt tccttcctct gtgaacatga agttcttagc tacagctgtt
      841 tcctcatttg tcttctctct ctctctctct ctctctctct ctctct
//
