LOCUS       XM_039088711            2078 bp    mRNA    linear   ROD 11-JUN-2023
DEFINITION  PREDICTED: Rattus norvegicus CD200 molecule like 2 (Cd200l2), mRNA.
ACCESSION   XM_039088711
VERSION     XM_039088711.1
DBLINK      BioProject: PRJNA677964
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_051346.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            [WARNING] On Feb 22, 2024 this sequence was replaced by
            XM_039088711.2.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_015227675.2-RS_2023_06
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.1
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 06/06/2023
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 14% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..2078
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN/NHsdMcwi"
                     /db_xref="taxon:10116"
                     /chromosome="11"
                     /sex="male"
                     /tissue_type="kidney"
                     /geo_loc_name="USA: Wisconsin, Milwaukee, Medical College
                     of Wisconsin"
                     /collection_date="2019-03-08"
                     /collected_by="Rebecca Schilling"
     gene            1..2078
                     /gene="Cd200l2"
                     /note="CD200 molecule like 2; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 1 EST,
                     1 Protein, and 84% coverage of the annotated genomic
                     feature by RNAseq alignments"
                     /db_xref="GeneID:685716"
                     /db_xref="RGD:1590252"
     CDS             978..2078
                     /gene="Cd200l2"
                     /codon_start=1
                     /product="OX-2 membrane glycoprotein-like"
                     /protein_id="XP_038944639.1"
                     /db_xref="GeneID:685716"
                     /db_xref="RGD:1590252"
                     /translation="MDFLLHFSLHLLLLPLCEQESESSQRIKHKNYETAILGRNVTIF
                     CNMTSLADVLQVTWQKIQDSSPHNIGTYSHKYGERILPPYVNRLRCKLLEPSASFMTI
                     QGVTFDDEACYKCLFNTFPHVSHGEQTCLNISTVSELVTELQSVPGSEDLHSLRCSAV
                     GKPAPGISIYPSQVTVHPAQEYLVQNSNGTVAVTKIYSISLKTARSLGLQNVVVSMTH
                     PVRHEEKIVPLPGNQGCTTNPCLNWKITATVFIILFLISWIIIGAHCYIHFKKERSEN
                     LPEPSPLQMSNTIPTLIPTPPTKETENLISQHHQTDLIGKVHKDPYRGKFPSSHRLSP
                     DSRYRVSAGTDIGQKQYCVEYHEYWIRHSVNP"
ORIGIN      
        1 ccaccgggtc accttttccc tgctggatca gtgacccagg tttggctaag ccacagcagg
       61 tcattgagac cttccaccct gatccaatct ggaagaactt tcagaagcct gacacttggc
      121 aaggctcctt ggatgagagt ttttctggac tttggctaac ccaaatttta tttcccacca
      181 ggacatccga aagtgaaatt acatatggga tgatgcagtt ttcatccatg cctctgtcga
      241 actgccctga aatatcctca gccaagagaa gatccttttg ggttcaagtg ggaagggaga
      301 tgggacagga tctcaggcac gggctgcaac tggattgggg gctggtcctc ctttctgctt
      361 cttttgccta ggttgctaga tcactctccc taccaccacc accgtcatcc ctacccctca
      421 ggtgcctcca attggtgctt cagccccggc ccctggggaa gcaggtctcg gggttatcaa
      481 gggctagaaa tgtgatccca gggcctgctt cccctcctgg tcaaggccaa ctacattcta
      541 cccgggctga ggtgcctgtt caggtgcgat ttcccaagag ccatagaggt tgtgggaggt
      601 attggcaaag ggaggggctg ttataagaat ctgcctctag actaatttct ctttccactc
      661 ccagtggggc cctctctcta gtgctagaac agaagagcag gacagctctg attttttaaa
      721 ataaatcctg aattgtattt acaaaataga gatagaatta cattattaaa tgaaataaga
      781 atatttatgc ttgtagaaag attattgatt ttgacagatg gtcattggtg ggtctcaatg
      841 gaagagcatt ccattaagtt atgtagaaga atgatgtgtt aatgagtaac catgatttgg
      901 tggggaaaag tatgaggaaa tatttgtctc aatcagcaag gaaacaagat tagtgaaggc
      961 cttcgtcaac agattcaatg gactttttac tccatttcag tctccatctg ttactgcttc
     1021 ctctctgtga gcaagaatca gagtcttcac agagaataaa gcataagaat tatgaaacag
     1081 ctatcctggg aagaaacgtt accatcttct gcaatatgac cagtttggct gatgttttgc
     1141 aagttacctg gcagaaaatc caagactctt cacctcacaa tattggcact tacagtcaca
     1201 aatatggaga aaggattctc ccaccatacg taaacaggct gcggtgtaag ttgctggaac
     1261 ccagtgcctc cttcatgact atccaaggag tgacatttga cgatgaagcc tgctacaagt
     1321 gcctgtttaa cacttttcca cacgtcagcc acggagaaca aacctgcctt aacatttcaa
     1381 ctgtatctga actggtaact gaactccagt ctgtacctgg ctctgaggat cttcatagcc
     1441 ttcgttgttc tgctgtggga aagcctgccc ctggaatctc catttaccca tcacaagtca
     1501 cagtacaccc agcacaagag taccttgttc agaactccaa tggcacagtg gctgtcacta
     1561 aaatctacag catctctttg aaaactgcga ggtccctggg tctccagaac gtggttgtgt
     1621 ccatgactca ccctgtaaga cacgaagaga agatagtccc tctgccagga aatcaaggat
     1681 gtaccacaaa tccttgttta aactggaaga taacagcaac tgtattcatc atattgtttc
     1741 tcatttcatg gatcatcatt ggggcccatt gctatattca tttcaaaaag gaaaggtcag
     1801 agaacttgcc tgaaccatca ccactgcaga tgtctaacac aataccaact ctgataccca
     1861 caccaccaac aaaagaaacc gagaacttga taagccaaca ccaccagaca gatctaattg
     1921 gaaaggtgca caaggatcca taccgaggaa agtttccctc atcccacagg ctttcgccgg
     1981 attctcggta ccgtgtcagt gcaggcaccg acattggtca gaagcaatac tgtgtggaat
     2041 atcatgagta ttggataagg cattctgtaa atccatga
//
