LOCUS       XM_039084583            2366 bp    mRNA    linear   ROD 11-JUN-2023
DEFINITION  PREDICTED: Rattus norvegicus cyclin Y-like 1 (Ccnyl1), transcript
            variant X1, mRNA.
ACCESSION   XM_039084583
VERSION     XM_039084583.1
DBLINK      BioProject: PRJNA677964
KEYWORDS    RefSeq.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_051344.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_015227675.2-RS_2023_06
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.1
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 06/06/2023
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2366
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN/NHsdMcwi"
                     /db_xref="taxon:10116"
                     /chromosome="9"
                     /sex="male"
                     /tissue_type="kidney"
                     /geo_loc_name="USA: Wisconsin, Milwaukee, Medical College
                     of Wisconsin"
                     /collection_date="2019-03-08"
                     /collected_by="Rebecca Schilling"
     gene            1..2366
                     /gene="Ccnyl1"
                     /note="cyclin Y-like 1; Derived by automated computational
                     analysis using gene prediction method: Gnomon. Supporting
                     evidence includes similarity to: 2 mRNAs, 5 ESTs, and 100%
                     coverage of the annotated genomic feature by RNAseq
                     alignments, including 3 samples with support for all
                     annotated introns"
                     /db_xref="GeneID:316452"
                     /db_xref="RGD:1310683"
     CDS             90..1226
                     /gene="Ccnyl1"
                     /codon_start=1
                     /product="cyclin-Y-like protein 1 isoform X1"
                     /protein_id="XP_038940511.1"
                     /db_xref="GeneID:316452"
                     /db_xref="RGD:1310683"
                     /translation="MEIRVRAAQLEGRGGAFPKLGRRAGPAEPDYESEVYEAAAGDAV
                     AVAPAPAAAVEPAELDFGAGEGHHLQHISDREMPEDLALESNPSDHPRASTIFLSKSQ
                     TDVREKRKSNHLNHVSPGQLTKKYSSCSTIFLDDSTVSQPNLRTTIKCVTLAIYYHIK
                     NRDANRSLDIFDERSHPLTREKVPEEYFKHDPEHKFIYRFVRTLFSAAQLTAECAIVT
                     LVYLERLLTYAEIDICPTNWKRIVLGAILLASKVWDDQAVWNVDYCQILKDITVEDMN
                     EMERHFLELLQFNINVPASVYAKYYFDLRSLADDNNLNFLFAPLSKERAQNLEIGRAS
                     ANSGPASYEGGVNANQASQRTRAGNLAPSPGVLCGGSPEWYSLS"
ORIGIN      
        1 gccttcgggg cccgccttga agcgcggcct cgagtaacaa actgccgcag ctgccaagct
       61 ggagcccaac tccgctcagc tcgcgatgaa tggaaatcag agtccgcgcg gctcagcttg
      121 agggacgggg aggggctttc cccaagctgg gccggcgcgc gggaccggca gagcccgact
      181 acgagtccga ggtctacgag gcggcggccg gggacgcggt ggccgtagcg ccggcgcctg
      241 ctgcggccgt ggagccggct gagttggatt tcggagccgg cgagggccac cacctgcagc
      301 acatcagcga ccgagagatg cccgaagatc tagctttgga atcaaaccct tccgaccacc
      361 cgagggcaag cacaattttc ctcagcaaat ctcaaacgga tgtgcgtgaa aagaggaaga
      421 gcaaccattt aaaccatgta tctccagggc agcttactaa aaagtatagc tcatgctcaa
      481 caatatttct agatgacagc acagtcagcc agcctaacct tagaaccaca ataaaatgtg
      541 tgaccttagc aatatattac cacataaaga acagagatgc aaatagatcc ctagacattt
      601 ttgatgagcg gtcacatcct ctcacaagag agaaagttcc agaggagtac tttaagcatg
      661 atcctgaaca caaatttatt tacagatttg ttcgcacact ctttagtgct gcacagctga
      721 cagcggaatg tgcaatagtg acattggttt acttagagag gctcctaact tatgctgaga
      781 tcgacatttg tccaaccaac tggaaaagaa ttgttttggg agccattctt cttgcctcca
      841 aggtttggga tgatcaggct gtatggaatg tagactattg ccagatcctc aaggacatta
      901 cagttgagga catgaatgag atggaaaggc atttcttgga gctactccag tttaatatta
      961 atgttcctgc cagtgtttat gccaaatact actttgacct tcgctcctta gcagatgaca
     1021 acaacctgaa ttttctgttt gctcctctca gcaaagagcg agcacagaac ctagagatcg
     1081 gaagagcgtc cgccaatagt ggaccggcaa gttacgaggg cggggtcaat gctaatcagg
     1141 cctcccagag aacccgggcg ggaaacctgg ccccaagtcc tggagttctc tgtggtggtt
     1201 caccagaatg gtactcactt tcctgaaggt tctgctctct gaacgcctgc ttccagggcc
     1261 tccactaggc catctctctc cagttaagtg tccttatcga ggtccggtgc ttgtttaaag
     1321 ggatgagagg tcaattcagt tgtgccacct gtcctccccc ttctgagctg ccttgtgcta
     1381 ggtgacagac gcgctagtac ttaatgagca acctcgtgtt agttaatcgt ttacaccttg
     1441 ataggcaatc tggataccct agaattctga ggccagaacg cctcagaact tgacctaaac
     1501 agttgagcta acaagacagc agaaacgttg acaaacttgt gcccttccct gtgggagctc
     1561 ctagcacaca gtaggctctc tgatgacaaa cctagaatcc gaaaccagaa gttgggcagc
     1621 agaattcaca atctttaccc tccctaggaa atatcgatat ttcccaggct ttgcctttcg
     1681 tatatacaac aaaatcttgc cgttgtaact agaggatgaa tttctttcca gttttggatg
     1741 actctagaga cggtagtcct tagcagtagc aatttataat ccctggcaga tctgaagaca
     1801 cccacagaga aaaactcttg gactgggaca gtgtacagct cacggtgctg ggttccccag
     1861 ggttggctgc tgtgcacttt ggcgaggctg ggacccggta agggggtcgc actggggcag
     1921 taggaaccgt ggaaagacct gctacccgct gtcaacggag ggacacacag tggcgctctc
     1981 ctgataggtt agtatactcc aagttttaaa tgtctcacaa atgcctctct tctgtgagta
     2041 ctaattaggt tgggagactg aggtgtttag catgcttgaa attcattcac acgcttatga
     2101 agaggcttta aattgtatac tgctccttca ctccctctgc tgggggaggg gagtgggagg
     2161 gattcgaagt aggggagagc ctaaggggta cttgaaggac tctgaactgc cctcactggc
     2221 tgagatctgt tgggtgttat tgtcttctgt gccggttgta caggctgaaa agccattttc
     2281 agtgtatcaa caaggttttg tgggagctaa tgaaattctg tatttaatct cagacatcac
     2341 agctattaat aaatgtttaa aacata
//
