LOCUS       NM_053700               1344 bp    mRNA    linear   ROD 27-MAR-2024
DEFINITION  Rattus norvegicus C-C motif chemokine ligand 28 (Ccl28), mRNA.
ACCESSION   NM_053700
VERSION     NM_053700.2
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
REFERENCE   1  (bases 1 to 1344)
  AUTHORS   Kutzler,M.A., Kraynyak,K.A., Nagle,S.J., Parkinson,R.M.,
            Zharikova,D., Chattergoon,M., Maguire,H., Muthumani,K., Ugen,K. and
            Weiner,D.B.
  TITLE     Plasmids encoding the mucosal chemokines CCL27 and CCL28 are
            effective adjuvants in eliciting antigen-specific immunity in vivo
  JOURNAL   Gene Ther 17 (1), 72-82 (2010)
   PUBMED   19847203
REFERENCE   2  (bases 1 to 1344)
  AUTHORS   Gu,J.W., Young,E., Pan,Z.J., Tucker,K.B., Shparago,M., Huang,M. and
            Bailey,A.P.
  TITLE     Long-term high salt diet causes hypertension and alters renal
            cytokine gene expression profiles in Sprague-Dawley rats
  JOURNAL   Beijing Da Xue Xue Bao Yi Xue Ban 41 (5), 505-515 (2009)
   PUBMED   19829664
REFERENCE   3  (bases 1 to 1344)
  AUTHORS   Lee,J.S., Kamada,S., Takami,Y., Oka,K., Ochiai,Y., Iwaya,H.,
            Hara,H. and Ishizuka,S.
  TITLE     Depletion of CD8alpha+ lymphocytes attenuates CCL28 expression in
            villus epithelia in rats
  JOURNAL   Immunol Lett 124 (1), 50-54 (2009)
   PUBMED   19393265
REFERENCE   4  (bases 1 to 1344)
  AUTHORS   Gonzalez-Begne,M., Lu,B., Han,X., Hagen,F.K., Hand,A.R.,
            Melvin,J.E. and Yates,J.R.
  TITLE     Proteomic analysis of human parotid gland exosomes by
            multidimensional protein identification technology (MudPIT)
  JOURNAL   J Proteome Res 8 (3), 1304-1314 (2009)
   PUBMED   19199708
REFERENCE   5  (bases 1 to 1344)
  AUTHORS   Kim,H.J., Jung,C.G., Jensen,M.A., Dukala,D. and Soliven,B.
  TITLE     Targeting of myelin protein zero in a spontaneous autoimmune
            polyneuropathy
  JOURNAL   J Immunol 181 (12), 8753-8760 (2008)
   PUBMED   19050296
REFERENCE   6  (bases 1 to 1344)
  AUTHORS   English,K., Brady,C., Corcoran,P., Cassidy,J.P. and Mahon,B.P.
  TITLE     Inflammation of the respiratory tract is associated with CCL28 and
            CCR10 expression in a murine model of allergic asthma
  JOURNAL   Immunol Lett 103 (2), 92-100 (2006)
   PUBMED   16290206
REFERENCE   7  (bases 1 to 1344)
  AUTHORS   John,A.E., Thomas,M.S., Berlin,A.A. and Lukacs,N.W.
  TITLE     Temporal production of CCL28 corresponds to eosinophil accumulation
            and airway hyperreactivity in allergic airway inflammation
  JOURNAL   Am J Pathol 166 (2), 345-353 (2005)
   PUBMED   15681819
REFERENCE   8  (bases 1 to 1344)
  AUTHORS   Lazarus,N.H., Kunkel,E.J., Johnston,B., Wilson,E., Youngman,K.R.
            and Butcher,E.C.
  TITLE     A common mucosal chemokine (mucosae-associated epithelial
            chemokine/CCL28) selectively attracts IgA plasmablasts
  JOURNAL   J Immunol 170 (7), 3799-3805 (2003)
   PUBMED   12646646
REFERENCE   9  (bases 1 to 1344)
  AUTHORS   Hieshima,K., Ohtani,H., Shibano,M., Izawa,D., Nakayama,T.,
            Kawasaki,Y., Shiba,F., Shiota,M., Katou,F., Saito,T. and Yoshie,O.
  TITLE     CCL28 has dual roles in mucosal immunity as a chemokine with
            broad-spectrum antimicrobial activity
  JOURNAL   J Immunol 170 (3), 1452-1461 (2003)
   PUBMED   12538707
REFERENCE   10 (bases 1 to 1344)
  AUTHORS   Wang,W., Soto,H., Oldham,E.R., Buchanan,M.E., Homey,B., Catron,D.,
            Jenkins,N., Copeland,N.G., Gilbert,D.J., Nguyen,N., Abrams,J.,
            Kershenovich,D., Smith,K., McClanahan,T., Vicari,A.P. and
            Zlotnik,A.
  TITLE     Identification of a novel chemokine (CCL28), which binds CCR10
            (GPR2)
  JOURNAL   J Biol Chem 275 (29), 22313-22323 (2000)
   PUBMED   10781587
COMMENT     PROVISIONAL REFSEQ: This record has not yet been subject to final
            NCBI review. The reference sequence was derived from
            JAXUCZ010000002.1.
            
            On Nov 26, 2020 this sequence version replaced NM_053700.1.
            
            Publication Note:  This RefSeq record includes a subset of the
            publications that are available for this gene. Please see the Gene
            record to access additional publications.
            
            ##Evidence-Data-START##
            Transcript exon combination :: AF361490.1, SRR26643295.8067.1
                                           [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMEA5760389, SAMN16676807
                                           [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on single protein-coding transcript
            ##RefSeq-Attributes-END##
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-107               JAXUCZ010000002.1  53334071-53334177
            108-234             JAXUCZ010000002.1  53352140-53352266
            235-1344            JAXUCZ010000002.1  53357600-53358709
FEATURES             Location/Qualifiers
     source          1..1344
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN"
                     /db_xref="taxon:10116"
                     /chromosome="2"
                     /map="2q15"
     gene            1..1344
                     /gene="Ccl28"
                     /gene_synonym="Scya28"
                     /note="C-C motif chemokine ligand 28"
                     /db_xref="GeneID:114492"
                     /db_xref="RGD:619937"
     exon            1..107
                     /gene="Ccl28"
                     /gene_synonym="Scya28"
                     /inference="alignment:Splign:2.1.0"
     CDS             44..451
                     /gene="Ccl28"
                     /gene_synonym="Scya28"
                     /note="CC chemokine CCL28; C-C motif chemokine 28;
                     chemokine (C-C motif) ligand 28"
                     /codon_start=1
                     /product="C-C motif chemokine 28 precursor"
                     /protein_id="NP_446152.2"
                     /db_xref="GeneID:114492"
                     /db_xref="RGD:619937"
                     /translation="MQQAGLTLVAVAVCVAFRTSEAILPIASSCCTEVSHHIPRRLLE
                     RVNSCSIQRADGDCDLAAVILHVKRRRICVSPHNPTLKRWMSASEMKNGKENLCPRKK
                     QDSGKDRKGHTPRKHGKHGTRRIHGTHGHEAPR"
     exon            108..234
                     /gene="Ccl28"
                     /gene_synonym="Scya28"
                     /inference="alignment:Splign:2.1.0"
     exon            235..1344
                     /gene="Ccl28"
                     /gene_synonym="Scya28"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 acagcctcac cggtcattgc cagattcagc tggtcaggcg ggaatgcagc aagcaggact
       61 taccctcgtg gctgtggctg tgtgtgtggc ctttcgaacc tcggaagcca tacttcccat
      121 agcttccagc tgttgcactg aagtttctca tcatattccc agaagacttc tggaaagagt
      181 gaattcgtgc agcatccaga gagctgatgg ggactgtgac ctggctgctg tcatccttca
      241 tgttaaacgt agaagaatct gcgtcagccc gcacaatcca actttgaagc ggtggatgag
      301 cgcctcagag atgaagaatg gcaaagaaaa tctctgcccc agaaagaaac aagacagtgg
      361 gaaggacaga aaagggcaca ccccgagaaa gcacggaaaa cacggaacac gcagaataca
      421 tgggacacac ggccacgaag cccctcgtta gaacagacgc atggacctac agtgaactca
      481 agtgaactgg cccagacttg gttataaatt tctcagctga atcttcctat tgacacctaa
      541 aggtgttttg ctttgttttg ttaatgagta accacagcta agtctgtaag cactgggtat
      601 gctcaatccc agcaccaaaa gcaaaacaaa caaaactgaa gctatcctca gattttgtct
      661 agaaggatag cattcttctg ttcaactctg gcacaccttt gaaaggcaat ccttgtatac
      721 ccagcatcat ccaagtgcag gataaatgcc aaagaaaaca acactgaatt taaaattgta
      781 gtaaaataca ataatgtgaa atcaaagcac agtcacaaat tttaaattta ttttgtatgc
      841 tatattttaa aatctggttg ctatggtttg agtaagtgtc ctcaaaggcc tgtgtgtatt
      901 tttttaagat ttgtttattt tacgcatatg agtacactct tgctgtcttc agacacatca
      961 gaagagggca tcagatccca ttacagatgg ctgtgagcca ccaagcagtt gctgggactt
     1021 gaactcatga cctctggaag agcagtcagt gctcttaagc actgagccat ctctccagcc
     1081 cacaatgtct gtgtattgaa ggcttgcttg ttcttcatcc tgtggtgctc ctgggaagca
     1141 gtgggaaatt tgaaatgtgg agtctagtgg aacaaacttg ggtccccggg ggtgtgtcct
     1201 gtctttgttt cataccacca agaaggaagc agcttcttta gtattgtatt tccaccacaa
     1261 aatattctgt ctgccacagg cccagtggat catggactga aacctctaaa actgagagcc
     1321 aaaataaacc tttctgcttt ttaa
//
