LOCUS       NM_001005904            1919 bp    mRNA    linear   ROD 06-OCT-2024
DEFINITION  Rattus norvegicus calicin (Ccin), mRNA.
ACCESSION   NM_001005904 XM_233369
VERSION     NM_001005904.1
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
REFERENCE   1  (bases 1 to 1919)
  AUTHORS   de Mateo,S., Castillo,J., Estanyol,J.M., Ballesca,J.L. and Oliva,R.
  TITLE     Proteomic characterization of the human sperm nucleus
  JOURNAL   Proteomics 11 (13), 2714-2726 (2011)
   PUBMED   21630459
COMMENT     PROVISIONAL REFSEQ: This record has not yet been subject to final
            NCBI review. The reference sequence was derived from BC083832.1.
            
            On Oct 23, 2004 this sequence version replaced XM_233369.1.
            
            ##Evidence-Data-START##
            Transcript is intronless :: BC083832.1 [ECO:0000345]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on single protein-coding transcript
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..1919
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /db_xref="taxon:10116"
                     /chromosome="5"
                     /map="5q22"
     gene            1..1919
                     /gene="Ccin"
                     /note="calicin"
                     /db_xref="GeneID:298392"
                     /db_xref="RGD:1359369"
     exon            1..1888
                     /gene="Ccin"
                     /inference="alignment:Splign:2.1.0"
     CDS             61..1827
                     /gene="Ccin"
                     /codon_start=1
                     /product="calicin"
                     /protein_id="NP_001005904.1"
                     /db_xref="GeneID:298392"
                     /db_xref="RGD:1359369"
                     /translation="MKLEFTEKNYNSFVLQNLNKQRKRKEYWDMALTVDHHVFFAHRN
                     VLAAVSPLVKSLVSSNDMKTTDELYITIDPNYLSPATVDQLLDYFYSGKVVISEQNVE
                     ELLRGAQYFNTPRLRIHCNDFLIKSIRRVNCLRYLFLAELFELKEVSDLAYSGIRDNF
                     HFWASPEGSMHFMRCPPVIFGRLLRDENLHVLNEDQALSALINWVYFRKEEREKYFKK
                     FFNYINLNAVSNKTLMFASNKLTGLENNSAHATLIESVLMDRKQERPCSLLSYQRKGA
                     LLDSVVILGGQKAHGKFNDGVFAYIIQENLWLKLSEMPYRAAALSATAAGRYIYISGG
                     TTEQISGLKTAWRYDMDDNSWTKLPDLPIGLVFHTMVTCGGTVYSVGGSIAPRRYVSN
                     IYRYDERKEAWCLAGKMSIPMDGTAVITKGDRNLYIVTGRCLVKGYISRVGVVDCFDT
                     CTGEVVQCITFPIEFNHRPLLSFHQDNILRVHSHRQSVEINLQKIKANKSTTSVPLLP
                     NSCPLDVSHAICSIGDSKVFVCGGVTTASDVQTKDYTINPNAYLLDQKIGEWKTLACP
                     PEALDCPACCLAKLPCKILQRI"
ORIGIN      
        1 gaaaaagtct gccctccagt acctgctacc gatcttctgt ctcagccaac aagaagcacc
       61 atgaaactgg aattcacaga gaaaaactac aacagctttg tgctgcaaaa cctgaataaa
      121 cagaggaagc gcaaagagta ctgggacatg gccctgactg tggaccacca tgtcttcttc
      181 gcacatcgca acgtgctggc tgccgtctct ccactggtga aaagtcttgt ctccagcaac
      241 gacatgaaga ccaccgatga actctacatc accattgacc ccaactacct gagtccagcc
      301 acggtggacc agctcctgga ctacttctac agcggcaaag tggtgatctc agaacagaat
      361 gtggaggagc tgctccgtgg cgctcagtat ttcaataccc cacgccttcg gattcactgc
      421 aatgacttcc tgattaagtc cattcgacgc gtcaactgct tgcgctacct cttcttggct
      481 gagctgttcg agcttaaaga agtatcagac ttggcctact ctggcattcg cgacaacttc
      541 cacttctggg ccagtcccga gggctctatg cacttcatgc gctgcccacc tgtcatcttc
      601 ggccgcctgc tccgtgatga aaaccttcac gtgctcaacg aggaccaggc tctcagcgca
      661 ctcatcaatt gggtgtactt ccggaaggag gagcgggaaa aatacttcaa gaagttcttc
      721 aattacatca acctcaatgc tgtctccaac aagacgctga tgtttgccag caacaagctg
      781 actggcttgg agaacaactc ggcccacgcg accttaatcg aaagtgtcct gatggaccgc
      841 aagcaggagc gcccgtgcag cctgctgagc taccagcgga aaggggccct gcttgattca
      901 gtggtcatcc tgggtggcca gaaggcccat ggcaagttca acgacggagt gtttgcgtat
      961 atcatccagg agaacctgtg gctgaagctc tcagagatgc cataccgagc agccgcgctc
     1021 agtgccactg ctgctggccg ttacatctac atatctggtg gcaccactga gcagatttca
     1081 ggactgaaga cagcatggcg gtatgatatg gatgacaact cctggaccaa gctgcctgac
     1141 ctgcccattg ggcttgtctt ccacaccatg gtgacctgtg ggggaacagt ttactcagtg
     1201 ggtgggagca ttgccccacg ccggtacgtc tctaacatct atcgctacga tgaacgcaag
     1261 gaagcctggt gcttggcagg caagatgagc atccctatgg acgggactgc agtgatcact
     1321 aagggtgacc ggaacctgta cattgtcacc gggcgatgcc tggtgaaggg ctacatctcc
     1381 cgggtcggtg tggtggactg cttcgacacc tgtacagggg aagtggtcca gtgtatcact
     1441 ttccccatcg aattcaacca ccggcccctg ctctccttcc accaggacaa tatcctccgt
     1501 gtacacagcc accggcagag cgtggaaatc aacttacaga agataaaggc caacaagtca
     1561 accacctcag tgcctctgtt gcccaacagt tgtcccttgg atgtatccca cgctatctgc
     1621 tccatcggag acagcaaggt gtttgtatgt gggggtgtca ccacagccag cgatgttcag
     1681 acaaaggact acaccatcaa ccctaatgct tacttgctgg accaaaagat aggtgaatgg
     1741 aagacccttg cctgcccacc cgaggcactg gactgccctg cctgctgtct agccaagctg
     1801 ccttgcaaga ttcttcaaag aatttaaaca actttttaag cgggagaata agtaaatgca
     1861 ttattattca caatttaatg acagagaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaa
//
