LOCUS       XM_008759219            3880 bp    mRNA    linear   ROD 11-JUN-2023
DEFINITION  PREDICTED: Rattus norvegicus coiled-coil glutamate-rich protein 2
            (Ccer2), transcript variant X1, mRNA.
ACCESSION   XM_008759219
VERSION     XM_008759219.2
DBLINK      BioProject: PRJNA677964
KEYWORDS    RefSeq.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_051336.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            [WARNING] On Feb 22, 2024 this sequence was replaced by
            XM_008759219.3.
            
            On Jan 21, 2021 this sequence version replaced XM_008759219.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_015227675.2-RS_2023_06
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.1
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 06/06/2023
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3880
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN/NHsdMcwi"
                     /db_xref="taxon:10116"
                     /chromosome="1"
                     /sex="male"
                     /tissue_type="kidney"
                     /geo_loc_name="USA: Wisconsin, Milwaukee, Medical College
                     of Wisconsin"
                     /collection_date="2019-03-08"
                     /collected_by="Rebecca Schilling"
     gene            1..3880
                     /gene="Ccer2"
                     /note="coiled-coil glutamate-rich protein 2; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 1 long SRA read, and 100% coverage of the annotated
                     genomic feature by RNAseq alignments, including 44 samples
                     with support for all annotated introns"
                     /db_xref="GeneID:100909701"
                     /db_xref="RGD:6502457"
     CDS             1660..2508
                     /gene="Ccer2"
                     /codon_start=1
                     /product="coiled-coil domain-containing glutamate-rich
                     protein 2 isoform X1"
                     /protein_id="XP_008757441.1"
                     /db_xref="GeneID:100909701"
                     /db_xref="RGD:6502457"
                     /translation="MLFRAPTSTALLLLPLPPLLALLLGAASSAPLTPRPSKELTRCL
                     AEVVMEVLTLGQAQRGPCTALLHKEIFETEPQGCASPEEKRLLGGDFNKQESEKMRSS
                     QEIRGEEEEEEEAERTHKSEVQEQAVHTHLHSQLHQEEEKEEEEESQPEKTSEHVWKQ
                     RLEGAGDLQKRVAEKASDEETAQFQAEEKGMQLLGGGRNLWQGAERVGGERHEESSNH
                     RHHLEQPGTKAKQEAEAEEEEAREQEVSRGVTPRPPKGLSSCWATQCEIYHEVGQSDQ
                     ACTRTR"
ORIGIN      
        1 tccccctcct cctcctctcc ctcttcctcc tcctcctcct cctcttcttc ttctaaagaa
       61 accaaaattc tcactagaat gcttggctag tatgcacaaa accctgggtt tggttcccta
      121 gcacaaaatt aacagggtat tttggtatgt gtctataatc ccagcacttc agatgcagat
      181 ggacatctat aggacaaacc taatatacct caggtccttt ctcagacata taaattcctg
      241 gagtctggta tgatgccaca catctgtggt cccagcatgg aggaaactga agcaagaaga
      301 ttaagggtca aaggctttct aagagtgtta gtgcacatct ttaatgtcag cacttgggag
      361 gaagatatag gtggatcttc tgaatttgag ggtaccctga tctacatagc aagttccagg
      421 ttagccagga ttgtacaatg agaccccgtc taaacaagga actggaagga tggctcagca
      481 gttgagagca cccaccctct gctctttcaa aggacctgag ttcagttccc aatagccaca
      541 cctggtcgcc cacagcagcc tctaactcca gctgcagctg ctcagagggc catgtcacct
      601 gcactaacac aaccaccgcc acacacccac acaagctgtt ttttaaaagg aggttgcagc
      661 aagctgaggc tgtcgctagt aagacgctgt ctcaaagaaa caaaaacagg ttactggata
      721 ttatctgtgc tggttcacat tttgagaccc tgtctttcgg gggggggtag ggggcgggga
      781 aaaagttacc tgggatttgg ttgatggttt atcaagaaaa gtgctagtgt gaccttagtt
      841 cagatccttg gaatccacgt aaaagctgtg tgctcttata acccaagcac tattgtgacc
      901 agttggttgg atcccagggc cttcctagtt aactgttcta tcccaaaagt tcaatgagag
      961 atcctatttc aaaaaataaa aggggggagg gggatgtttg cccggatacc gggaaaggga
     1021 ataacactcg aaatgtatat aagaaatact caagttaata aaaaaaaaaa aagaaaaaaa
     1081 tataaagtgg agagcaacat atgaagacat ttgccgttga cttctggtct ccacgcatgc
     1141 attcacacca cacattgggt actggggtgg catggagccc cgtgtagtcc ccaaggcaag
     1201 gcactgccga agcacccctc acccaaaagt tctggagtgg gttgtcacaa aaatataaga
     1261 aagcgtcgta agcaattgtc ccagcactga gcagctggtg aataatggag caggggactt
     1321 gggtcagaag gaactcccac ctctagggga agtagattta caaggatcca ctttccagat
     1381 gaggaaagga cgaaaaaaag agttgcccag cttccatatg agtctccggg gagaccctcc
     1441 ccgagccgtg ctcctgagcc agaagcccag aggggtgcat gcttgagtgg gttcccatga
     1501 ataattgagg ttcctagagt gccccacagc tgtcccctct ccctgagccg gggagggggc
     1561 ggcggtgacg tcatttcctc ccccgcgggg tccactgcac ctgggttata aggcgctaac
     1621 cctggctgtc tgcccagcag agagtcccga ttctccacca tgctgttccg tgcacccacc
     1681 tctacagcgt tgctgctgct gcctctgccc ccgctgctgg cattgctgct gggggctgct
     1741 tcctcagctc ccctgacacc gagaccctcc aaagagctaa cccgctgtct agcagaggtg
     1801 gtgatggagg tgctgacact gggccaggcc cagagaggcc cctgcacagc tctgctccac
     1861 aaagagatat tcgagacaga gccccaaggc tgtgcgtccc ctgaggagaa gaggctgctg
     1921 ggtggggact tcaacaagca ggagtctgaa aagatgagat ccagccagga gataaggggt
     1981 gaggaggagg aggaggaaga agcagagagg acccacaagt ctgaggttca ggaacaggca
     2041 gtccacacgc acctccacag tcagcttcac caggaggagg agaaagagga ggaagaggag
     2101 agccagccag agaagacctc tgagcatgtg tggaagcaac gtctagaggg tgccggagac
     2161 ctccagaagc gggtggctga gaaggccagc gatgaggaga cagcccagtt tcaggcagag
     2221 gagaaaggca tgcagctgct ggggggaggc cgaaatctgt ggcagggggc tgagagggtc
     2281 ggaggagaga ggcatgaaga gtcctccaac catcgtcacc acctggagca gccaggtacc
     2341 aaggccaagc aggaggcaga ggcagaggag gaagaggctc gagagcagga ggtaagtaga
     2401 ggagtcactc caagaccgcc caagggactc tcctcgtgct gggccacaca atgtgaaatc
     2461 taccatgaag tgggtcagag tgaccaagcg tgcaccagaa ctaggtagcg atgtccaagc
     2521 aaggacagtg accaggaaga cgccgctaat tacccagaag caccagagtt agccaccatt
     2581 atctgtacca agtaagtcag ctcccactga agctagcagc tgctctctgg ctcacaatgc
     2641 tagtgacaga ggccatggat gaggcacatg ccaagctgat tgtcccagca aggtggctca
     2701 gtgggtacag actcgcgctg tccagtcttg caacctgagt ttaattccta gatcccacgt
     2761 ggtggatgga gaggactgag tcccgcaggt tgtcctctga cctctccaca cacgctaagt
     2821 agatgtagaa actttgtttt tgtaattacg ggctagagag atagtttttt ttttctttct
     2881 tttttttttt tttttttttt tttggagctg gggaccaaac ccagggcctt gctcttgcta
     2941 ggcaagcgct ctaccactga gctaaatccc caaccccaga gagagatagt ttaatggttt
     3001 aacggtccct tcagaggacc cagcttcaat tcccaggatc cacatggcat ctctggaact
     3061 cccattccca ggggatcata tgccctcttc tggcctcgct gggcactagg ctgacatgga
     3121 tatacaggca tctgatataa ggacaggcaa acaccaattt ttaaaaatta atgaaatatc
     3181 acctcagctg ggagcagcaa tcaaaatggc caaaacttca caaatgggcc ccctagggct
     3241 agggatgcag gttcacagtc gaatgtatga cttacatgca caggccctgg gttcgcttcc
     3301 cagcattgct acataagcca gctgtgacga cacacatctg gagtctcagc actcataaag
     3361 gatcaagaga tcaatgtggt aggctgtgcg aaccaccatg ctgctcaggt ggacaagcag
     3421 aacgtttggg tttgtagaag caaggatggt agccatcact gaccacaaca cacagctagg
     3481 atgggatttc aggccactag cacaggaagt ggcagggctg caattcacca tgaccacaga
     3541 ggtaaccata cttccgatct tccccaggaa cacaatgcgg agcggctgga gcacatgcag
     3601 gagcagttaa agaaggctac cgccatgcta ggggaggctc tggggaggga aggctgaccc
     3661 cactccactc cttgcccaca ctccctaagg ctcaggactg ttgacctcag agcgcccctc
     3721 caccaggcat cctgctcact tccaactggc agggactgga acaaggatgt gcctgagaac
     3781 caagcctgag agaagtctga gcagggcagg ggctcaggct gactcgggac cccaccccca
     3841 gctcctccac ccttcctgag tgaataaagc acaaagcaaa
//
