LOCUS       NM_001106235            2950 bp    mRNA    linear   ROD 22-MAR-2023
DEFINITION  Rattus norvegicus coiled-coil domain containing 97 (Ccdc97), mRNA.
ACCESSION   NM_001106235 XM_001070408 XM_214874
VERSION     NM_001106235.1
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
REFERENCE   1  (bases 1 to 2950)
  AUTHORS   Gaudet P, Livstone MS, Lewis SE and Thomas PD.
  TITLE     Phylogenetic-based propagation of functional annotations within the
            Gene Ontology consortium
  JOURNAL   Brief Bioinform 12 (5), 449-462 (2011)
   PUBMED   21873635
COMMENT     PROVISIONAL REFSEQ: This record has not yet been subject to final
            NCBI review. The reference sequence was derived from CH473979.2.
            
            On or before Oct 4, 2007 this sequence version replaced
            XM_001070408.1, XM_214874.4.
            
            ##Evidence-Data-START##
            Transcript exon combination :: FQ212311.1, FQ232330.1 [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMN06621351, SAMN12840129
                                           [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on conservation, expression,
                                      longest protein
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..2950
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /db_xref="taxon:10116"
                     /chromosome="1"
                     /map="1q21"
     gene            1..2950
                     /gene="Ccdc97"
                     /gene_synonym="RGD1309393"
                     /note="coiled-coil domain containing 97"
                     /db_xref="GeneID:292724"
                     /db_xref="RGD:1309393"
     exon            1..202
                     /gene="Ccdc97"
                     /gene_synonym="RGD1309393"
                     /inference="alignment:Splign:2.1.0"
     CDS             154..1176
                     /gene="Ccdc97"
                     /gene_synonym="RGD1309393"
                     /codon_start=1
                     /product="coiled-coil domain-containing protein 97"
                     /protein_id="NP_001099705.1"
                     /db_xref="GeneID:292724"
                     /db_xref="RGD:1309393"
                     /translation="MEAVAAAAVAERKPDDDCVEARCVHWGELSQTSIPPGPQEKETA
                     ESTPDVTSGDSSQAESPAVSAMLHAIAASHLPVCSQQQGEPDLTEPEKVAILGQLYHK
                     KPLVFLERFRTGLREEHLACFGHLRGDHRADFYCAEVARQGTARPRTLRTRLRNRRYA
                     ALRELIQGGEYFSDEQMRFRAPLLYEQYIGQYLTQEELSARTPAPQAPRSGSPGTPAY
                     PLSDLLFQSYQERELQQKLLQQQEEEEACFEEEEDSDEEDQRSDKDLEAWVPDSEERL
                     ILREEFTSRMHQRFLDGKDGGFDYSTVDDNPDFDNLDIVARDEEDRYFDEEEPEDVSS
                     PELDGD"
     exon            203..655
                     /gene="Ccdc97"
                     /gene_synonym="RGD1309393"
                     /inference="alignment:Splign:2.1.0"
     exon            656..925
                     /gene="Ccdc97"
                     /gene_synonym="RGD1309393"
                     /inference="alignment:Splign:2.1.0"
     exon            926..1055
                     /gene="Ccdc97"
                     /gene_synonym="RGD1309393"
                     /inference="alignment:Splign:2.1.0"
     exon            1056..2950
                     /gene="Ccdc97"
                     /gene_synonym="RGD1309393"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 atgcgcataa agaaggccca cctttgaccc ggaacttagg tgtctctgtt ccgcttaaag
       61 acgcttgtgt gaccggaagt acttacgggt acctagggtc cagcctaact tccggagccc
      121 gctgcggcgg ttactgggtc ggagaatctt gttatggagg ccgtggcagc tgcggcagtg
      181 gcggagagga agccggatga tgactgtgtg gaggccagat gtgtgcactg gggggagctg
      241 agccagactt ccattccacc gggacctcaa gagaaggaga cagcagagag tacaccagac
      301 gtcaccagcg gtgacagctc tcaggcagag agtccggctg taagtgccat gttgcacgcc
      361 atcgctgcca gccacctgcc cgtgtgcagc cagcagcagg gtgagcctga cctgacagag
      421 cctgagaagg tggccatcct gggccagctg tatcacaaga agccactggt gttcctagag
      481 cgcttccgca caggcctccg ggaagagcac ctggcctgct tcggccacct gcgtggagat
      541 caccgtgctg atttctactg tgccgaggtg gcccggcaag gcactgcccg gcctcgaact
      601 ctgcgtaccc gccttcgtaa ccggcgttac gctgccctgc gtgagctcat ccaaggaggc
      661 gagtacttta gcgacgagca gatgcggttt cgggccccgc tgctgtacga gcagtacata
      721 ggacaatacc tcacgcagga agagctcagt gcccgcacac cagccccgca ggcccccagg
      781 tctggctccc ccggcacacc tgcctatcca ctctccgacc tgctgtttca gtcctaccag
      841 gagcgggagc tgcagcaaaa gctgctccag cagcaagagg aggaggaggc ctgttttgag
      901 gaggaagagg acagtgatga ggaagaccag aggtcggata aagacctgga agcctgggtg
      961 cctgactcgg aagagaggct gatccttcga gaggagttca ccagccgcat gcaccagcgc
     1021 ttcctggatg gcaaagatgg gggctttgac tacagcacgg tggatgacaa ccctgacttt
     1081 gataacctgg acatcgtggc gcgtgatgag gaggatcgat actttgatga agaggaacct
     1141 gaggatgtgt ccagcccaga gctagacggg gactgacggt gcccaccctt ccagccagtg
     1201 acaccatgct cacccctcca ggcagctggt tacaagctgg cttagtgact cagaggccat
     1261 caagacaggc ccccggactt ggcccacctc agataatctc cccacttctg ttaaggggtt
     1321 cctgctcttt tctctgggaa catcactgcc cctcttgccc tggccccatc gtcttttctc
     1381 tgatccagga tcctgctgtg tagaaccaac ttgcctgtta gttgctttgt agccaaggct
     1441 ggcctgaaac tcagtttccc acatgctgtg tgtgggtgaa tccccgtgtt tggtctacat
     1501 gtccttttct taccctcttt ctcccttcat gccactgccc cacctcccga ttcccaggtc
     1561 tctaaccttc tgcccatctt tgtgtcatga gtgctgtgta cacatcaggg ccctggcaat
     1621 cattggtgac tgcagctgtc acatgaatgc cagccatcaa gttccatctg atgcccagca
     1681 cagccctcag tctctccacc gctctctgcc agtgacctac gacgggcacc tctttgctac
     1741 ccccaggctc ccacctcaaa ctccatgccg ctgctgcctc ctcgttcatt tccacgttat
     1801 ctccaggcct tgatgtcagc ccctctgtct cagcctttat ggctggtcct ctgggtcccc
     1861 tcccccagac ctggccatca agggcagcag aagccctctc tgtggatgga ggttagggga
     1921 acccagttgg caccagcctc tgctgctgtg ctaactagga gtgctggcaa agcagagctg
     1981 ggtaccacag ggccagctcg ggtgtaggag gaacatgaag aggggactct cttccctaca
     2041 gccccccttc ccagccacaa ttttcctttt cctcacttcc tctccctctc cctctcctgt
     2101 ttacactccc caaatacgca caggctgtta tcatggctct tgagtcatca cacacagaca
     2161 tacagcctgc cccagtgtcc ctgcccccag ccggccacag ggcccgcccc acagagcccc
     2221 ctgctgccct gggctaatga aagccagatg gctgcttgtg actcagccgt ggcctgtggg
     2281 aacccagacg tcctaccttc ccatgcccca cgcccgggcc ctgcgtcccc agcagacgga
     2341 agcaacctgc tcctatgggg accggagcag cgtgtctgga cctgagggcc caaacatagg
     2401 ctctctctgt acctgaagga ccctcagaac tgtaaagcca agctcctgcc cctgggcctt
     2461 ggctctgccc tccgtgttaa caaaactcac ccagggggta gagggtgttc tcttgaactg
     2521 ttgagagatc ctcaacagcc cagcctgggc caggcctgag tgacacctct tgacgggcct
     2581 ggaaacaagg ctgtcaactg ccacttgtca caaagggtgg aaagggccca gaagtagcca
     2641 tatgcctctt gggaccacct ggcctcccag gcacagccag gactagaaca cgctgtacac
     2701 agcacttgcg acctcactgg acagcggtga ggatgcagag acagactcct cacattgtgg
     2761 gggactgtag aaggtgccgg tgttgtggtg ttacacccct acccttacct ccccagagga
     2821 cactgtgagt ccacaactgg gatcccacca cactggacgg gagccaggag cgctcttttg
     2881 ggaagtccat tggcttaagt attttcacag ttaaccagtg ttctgtccga ccattaaact
     2941 tatttaagat
//
