LOCUS       NM_001014061            2472 bp    mRNA    linear   ROD 04-JUN-2024
DEFINITION  Rattus norvegicus coiled-coil domain containing 91 (Ccdc91), mRNA.
ACCESSION   NM_001014061 XM_232540
VERSION     NM_001014061.1
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
REFERENCE   1  (bases 1 to 2472)
  AUTHORS   Mardones,G.A., Burgos,P.V., Brooks,D.A., Parkinson-Lawrence,E.,
            Mattera,R. and Bonifacino,J.S.
  TITLE     The trans-Golgi network accessory protein p56 promotes long-range
            movement of GGA/clathrin-containing transport carriers and
            lysosomal enzyme sorting
  JOURNAL   Mol Biol Cell 18 (9), 3486-3501 (2007)
   PUBMED   17596511
REFERENCE   2  (bases 1 to 2472)
  AUTHORS   Lui,W.W., Collins,B.M., Hirst,J., Motley,A., Millar,C., Schu,P.,
            Owen,D.J. and Robinson,M.S.
  TITLE     Binding partners for the COOH-terminal appendage domains of the
            GGAs and gamma-adaptin
  JOURNAL   Mol Biol Cell 14 (6), 2385-2398 (2003)
   PUBMED   12808037
REFERENCE   3  (bases 1 to 2472)
  AUTHORS   Suzuki,H., Fukunishi,Y., Kagawa,I., Saito,R., Oda,H., Endo,T.,
            Kondo,S., Bono,H., Okazaki,Y. and Hayashizaki,Y.
  TITLE     Protein-protein interaction panel using mouse full-length cDNAs
  JOURNAL   Genome Res 11 (10), 1758-1765 (2001)
   PUBMED   11591653
COMMENT     PROVISIONAL REFSEQ: This record has not yet been subject to final
            NCBI review. The reference sequence was derived from BC079135.1.
            
            On Apr 20, 2005 this sequence version replaced XM_232540.3.
            
            ##Evidence-Data-START##
            Transcript exon combination :: BC079135.1 [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMD00132261, SAMD00132262
                                           [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on conservation, expression,
                                      longest protein
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..2472
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /db_xref="taxon:10116"
                     /chromosome="4"
                     /map="4q44"
     gene            1..2472
                     /gene="Ccdc91"
                     /note="coiled-coil domain containing 91"
                     /db_xref="GeneID:312863"
                     /db_xref="RGD:1359502"
     exon            1..155
                     /gene="Ccdc91"
                     /inference="alignment:Splign:2.1.0"
     exon            156..199
                     /gene="Ccdc91"
                     /inference="alignment:Splign:2.1.0"
     CDS             170..1498
                     /gene="Ccdc91"
                     /note="GGA-binding partner; coiled-coil domain-containing
                     protein 91-like"
                     /codon_start=1
                     /product="coiled-coil domain-containing protein 91"
                     /protein_id="NP_001014083.1"
                     /db_xref="GeneID:312863"
                     /db_xref="RGD:1359502"
                     /translation="MDDDDFGGFEAAETFDGEQGGNQAVSPAVPWATFPAVSGVRLSP
                     ASPELILDHDRSSPSSGHLRSDAVISSPDDTRADSSLVNQTISKVQLQQSAHTHLNIP
                     LFPLGLTDESNHGALALEDEPEGPGVHVSNSQLRQKISSLETKLKASEEEKQRIKKDV
                     ESLMEKHSVLEKDFLKEKEQDAVSFQARYRELQEKHKQELEDMRKAGHEALSIIVDEY
                     KALLQSSVKQQLDAIEKQYVSAIEKQAHRCEELLHAQHQRLLEVLDTEKELLKEKIQE
                     ALTQQSQEQKETLGKCLQEEMQKNKETLESAVKLEKEAMKDVITKAVEEERENLEKVH
                     AEEREMWKTEHARDQERVAEAIQAAVQEQQRMSQEAVKAAIAEEQRRSEKAMEEAVKR
                     TRDELVEYVREQRRLDQVTRQRSLSSLELFLSCAQKQLSALIATEPVDIE"
     exon            200..278
                     /gene="Ccdc91"
                     /inference="alignment:Splign:2.1.0"
     exon            279..439
                     /gene="Ccdc91"
                     /inference="alignment:Splign:2.1.0"
     exon            440..643
                     /gene="Ccdc91"
                     /inference="alignment:Splign:2.1.0"
     exon            644..748
                     /gene="Ccdc91"
                     /inference="alignment:Splign:2.1.0"
     exon            749..826
                     /gene="Ccdc91"
                     /inference="alignment:Splign:2.1.0"
     exon            827..934
                     /gene="Ccdc91"
                     /inference="alignment:Splign:2.1.0"
     exon            935..1027
                     /gene="Ccdc91"
                     /inference="alignment:Splign:2.1.0"
     exon            1028..1096
                     /gene="Ccdc91"
                     /inference="alignment:Splign:2.1.0"
     exon            1097..1273
                     /gene="Ccdc91"
                     /inference="alignment:Splign:2.1.0"
     exon            1274..1387
                     /gene="Ccdc91"
                     /inference="alignment:Splign:2.1.0"
     exon            1388..2443
                     /gene="Ccdc91"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 tggacgccgg gtggtgcgtg ggctgcccca acgtgggttc ccggacccgc agtcaccggg
       61 aggggggttg cgtgtcccgt gtcccggagc acgtgcctga aagccgggtg tgacgcgcaa
      121 tagcgcgggg agcactgcgg cggcggcagg agcaggagct gcctaaagaa tggatgatga
      181 cgactttggt ggctttgagg ccgcagagac ctttgacggt gagcaaggtg gaaaccaagc
      241 agtgtcccct gctgtcccct gggccacctt tcctgcagta tccggagtgc gtctctcacc
      301 agcttctccg gagcttatcc tggaccatga ccgctcatcc ccatcctctg gccacctccg
      361 ttctgatgcc gtcatttcct caccagacga tacacgtgca gacagcagcc ttgtgaatca
      421 gaccatctca aaagttcagc ttcagcagtc agcgcacaca catctgaaca tccctctctt
      481 cccacttggg ttaacggatg agtcgaacca tggagcactt gccctggagg acgagcctga
      541 gggtcctggg gtccacgtgt ccaactctca gctccggcag aaaatatcaa gtctggagac
      601 taaactcaag gcttctgaag aagaaaagca gcgaattaaa aaggatgtgg agtcgctgat
      661 ggagaaacac agtgtcctgg agaaagactt cctgaaggaa aaggagcagg atgctgtgtc
      721 ctttcaagcc agataccgtg agcttcagga gaagcataaa caagagttgg aagacatgcg
      781 gaaggctggg cacgaggcgc tgagcattat agtggacgag tacaaggcac ttctgcagtc
      841 ctcagttaag cagcagctag atgccatcga gaagcagtat gtgtctgcca tcgagaaaca
      901 agctcaccgc tgtgaggagc tcctgcatgc tcagcatcag aggctcctag aagtgctgga
      961 caccgagaag gaactgctaa aagagaagat ccaggaagct ttgacgcagc agtcacagga
     1021 gcagaaggaa acactgggaa agtgcctaca ggaggaaatg cagaagaaca aagaaaccct
     1081 ggagtccgct gtgaagcttg agaaagaagc aatgaaagat gtcatcacta aagcagtgga
     1141 agaagagagg gaaaatctgg agaaagttca cgccgaagaa agagaaatgt ggaagacaga
     1201 acatgcaaga gatcaggaga gggtagcaga ggccatccag gccgctgtgc aggagcagca
     1261 gaggatgagt caggaagccg tcaaggccgc aatcgcagag gagcagaggc gaagtgaaaa
     1321 ggccatggag gaagccgtaa agagaacaag ggatgagctg gtggagtacg tgagggagca
     1381 gagaaggctt gatcaagtca cccgccagcg tagcctgtcc agtctggagc tgttcctctc
     1441 ctgcgcccag aagcagctga gtgcgttgat agctacggag cctgttgaca ttgaatagag
     1501 acacagctga tccgtcctgg tcgttaagcc tgcccactct gaagctgttc gtctcctggg
     1561 cccagaagca gctgagtgct ctaatggcca tagatcctgg tggcattgaa taaagggcac
     1621 gtgatgggct gccttgccct gggccattgc gtcagtcact agacttctaa gttagatgct
     1681 gtgacttaga caaatgctct tgtttcccgt ttaaacctgg aaagcggttt ccagtcccag
     1741 gacaagccag agcagtatcc agaagaccca tcaacagatc taacttactc tccgctgttt
     1801 tatcatgagt agtgatggaa gagtgtctgt gacccaaagt caaggaaaag tggtgtgtta
     1861 tccgaagttc atcgggtaaa ccgtacagct tcaggtgacc tgatgacatt gtattggtaa
     1921 aggtttacct tgtgaccacc tcaaggtgac gtgcagggag caaccactgt gcaaccatgc
     1981 atttacttga ttctaagtag tgagagcaga aacattggct cagccattgt tctgactaac
     2041 ctgtcctctt ccccacacgc gaccccacgt gttcccatag atttaccaaa agtgaacaac
     2101 actggctggc caggcttccg gcagctgccc catgtaaact ggggtgtgtg gcccaggctt
     2161 gcttcctgcc ttcttcaaag gctcgagatc atgtttcata atctattatc tggaaagagc
     2221 atcactcaga catctgcaca tctatttaat caaacaacag gcataagggg tgaactggga
     2281 tggtcatgcc tcacgagcag tgtgctccac atcgtgagcg gtttgaacct ccggggcact
     2341 gtgctcggct cacttcctgc tcacttcctg cagtgcttct gcttcctggg gctttgtatt
     2401 tttctgggat ttctcggcat aataaaagga actccaaaag gtcaaaaaaa aaaaaaaaaa
     2461 aaaaaaaaaa aa
//
