LOCUS       NM_001024885            1443 bp    mRNA    linear   ROD 01-JUN-2024
DEFINITION  Rattus norvegicus coiled-coil domain containing 90B (Ccdc90b),
            mRNA; nuclear gene for mitochondrial product.
ACCESSION   NM_001024885 XM_218915
VERSION     NM_001024885.1
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
REFERENCE   1  (bases 1 to 1443)
  AUTHORS   Gaudet,P., Livstone,M.S., Lewis,S.E. and Thomas,P.D.
  TITLE     Phylogenetic-based propagation of functional annotations within the
            Gene Ontology consortium
  JOURNAL   Brief Bioinform 12 (5), 449-462 (2011)
   PUBMED   21873635
COMMENT     PROVISIONAL REFSEQ: This record has not yet been subject to final
            NCBI review. The reference sequence was derived from BC097480.1.
            
            On Jun 17, 2005 this sequence version replaced XM_218915.3.
            
            ##Evidence-Data-START##
            Transcript exon combination :: BC097480.1, FQ218235.1 [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMD00132261, SAMD00132262
                                           [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            gene product(s) localized to mito. :: inferred from homology
            RefSeq Select criteria             :: based on single
                                                  protein-coding transcript
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..1443
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /db_xref="taxon:10116"
                     /chromosome="1"
                     /map="1q32"
     gene            1..1443
                     /gene="Ccdc90b"
                     /gene_synonym="RGD1308637"
                     /note="coiled-coil domain containing 90B"
                     /db_xref="GeneID:308820"
                     /db_xref="RGD:1308637"
     exon            1..402
                     /gene="Ccdc90b"
                     /gene_synonym="RGD1308637"
                     /inference="alignment:Splign:2.1.0"
     CDS             303..1073
                     /gene="Ccdc90b"
                     /gene_synonym="RGD1308637"
                     /note="coiled-coil domain-containing protein 90B,
                     mitochondrial"
                     /codon_start=1
                     /product="coiled-coil domain-containing protein 90B,
                     mitochondrial precursor"
                     /protein_id="NP_001020056.1"
                     /db_xref="GeneID:308820"
                     /db_xref="RGD:1308637"
                     /translation="MRNRWIWRFLRPECSGIRWISSPHGRLSPALRRGFLTTTTKSDY
                     DRRPVEITPLEQRKLTFDTHALVQDLETHGFDKGQAQTIVSVLSTLSNVSLDTVYKEM
                     VTKAQQEITIQQLMAHLDSIRKDMVILEKSEFANLRAENEKMKIELDQVKQQLINETS
                     RIRADNRLDINLERSRVTDMFTDQEKQLMEATNEFTKKDMQTKSIISETSNKIDTEIA
                     SLKTLMESSKLETIRYLAASVFTCLAIALGFYRFWKEN"
     exon            403..522
                     /gene="Ccdc90b"
                     /gene_synonym="RGD1308637"
                     /inference="alignment:Splign:2.1.0"
     exon            523..626
                     /gene="Ccdc90b"
                     /gene_synonym="RGD1308637"
                     /inference="alignment:Splign:2.1.0"
     exon            627..728
                     /gene="Ccdc90b"
                     /gene_synonym="RGD1308637"
                     /inference="alignment:Splign:2.1.0"
     exon            729..770
                     /gene="Ccdc90b"
                     /gene_synonym="RGD1308637"
                     /inference="alignment:Splign:2.1.0"
     exon            771..842
                     /gene="Ccdc90b"
                     /gene_synonym="RGD1308637"
                     /inference="alignment:Splign:2.1.0"
     exon            843..896
                     /gene="Ccdc90b"
                     /gene_synonym="RGD1308637"
                     /inference="alignment:Splign:2.1.0"
     exon            897..1011
                     /gene="Ccdc90b"
                     /gene_synonym="RGD1308637"
                     /inference="alignment:Splign:2.1.0"
     exon            1012..1419
                     /gene="Ccdc90b"
                     /gene_synonym="RGD1308637"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 gacaaactcg ccaccagcaa atgggcgcca gaggttctcc aagatcccgg tttcttaggg
       61 cggtaaaggc gggaagagat ggggaagggg cgatggacta gagggataag ctctgagtca
      121 tgagaagtgt ggctctgtga agaggcctag ctttgttaaa gaaaaacccc acaagtgttt
      181 tagtgacaga tcggaaacta catttcccag catccttatg gtgagagaac ttcattgtcc
      241 gaaagcctct gcgagaatca acaacattcc gcttcccttt gctgacccgg agctccgaga
      301 atatgaggaa ccgctggatt tggcggttcc tgcgtcccga gtgcagtgga atccgctgga
      361 tttcaagtcc ccacgggcgt ctgtcacccg ccctgcggag aggtttcttg accactacaa
      421 ctaagtcgga ttatgataga aggccagtgg aaataactcc tttagaacaa agaaaattaa
      481 cttttgatac ccatgcattg gtgcaggact tggaaactca tggatttgac aaagggcaag
      541 cacagacgat tgtgtcggtc ctaagtacgt tatcaaatgt cagcctggat actgtctaca
      601 aggagatggt gacgaaagcc caacaggaaa taaccatcca gcagctaatg gctcatttgg
      661 attccatcag aaaagacatg gtcatcctag agaaaagtga atttgcaaat ctgagagcag
      721 agaatgagaa aatgaaaatt gaactagatc aagttaagca gcagctgatt aatgaaacca
      781 gtcgaatcag agcagacaat aggctggaca tcaacctgga gcggagcaga gtgacagata
      841 tgttcacaga tcaagaaaaa caacttatgg aagcaaccaa tgaatttacc aaaaaggata
      901 tgcaaactaa aagtattatt tcagagacca gtaataaaat tgacactgaa atcgcttcct
      961 taaaaacact gatggagtcg agcaaacttg agacaattcg ttatcttgca gcctcggtgt
     1021 tcacttgctt ggcgatagca ctggggtttt ataggttctg gaaggagaac tgaccctcct
     1081 gttgctgctg ctggtcactc catagaatgt acttactaca aactcttcaa agaacttgta
     1141 gactaaatgg agtgttttgg tattttattt ttatgttgta catctttatg ttgaaaagct
     1201 ctaactcaaa gcctggcttg agatagaagt gcacttggtc cttatcctct gacaactata
     1261 gcaataaaaa gttttgcatt tgacctttgt aagtgaaata ggatttgtta tcagattaca
     1321 ttcttgtaaa cagttctgta gtctatacac ttgctggatt ttattttctt ggttattatt
     1381 gcaattagat ttttatataa aataaaatac tataacaaaa aaaaaaaaaa aaaaaaaaaa
     1441 aaa
//
