LOCUS       NM_001400779            1016 bp    mRNA    linear   ROD 01-APR-2024
DEFINITION  Rattus norvegicus coiled-coil domain containing 85B (Ccdc85b),
            transcript variant 1, mRNA.
ACCESSION   NM_001400779 XM_006230939
VERSION     NM_001400779.1
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
REFERENCE   1  (bases 1 to 1016)
  AUTHORS   Liu,X.F., Bera,T.K., Kahue,C., Escobar,T., Fei,Z., Raciti,G.A. and
            Pastan,I.
  TITLE     ANKRD26 and its interacting partners TRIO, GPS2, HMMR and DIPA
            regulate adipogenesis in 3T3-L1 cells
  JOURNAL   PLoS One 7 (5), e38130 (2012)
   PUBMED   22666460
REFERENCE   2  (bases 1 to 1016)
  AUTHORS   Iwai,A., Hijikata,M., Hishiki,T., Isono,O., Chiba,T. and
            Shimotohno,K.
  TITLE     Coiled-coil domain containing 85B suppresses the beta-catenin
            activity in a p53-dependent manner
  JOURNAL   Oncogene 27 (11), 1520-1526 (2008)
   PUBMED   17873903
REFERENCE   3  (bases 1 to 1016)
  AUTHORS   Du,X., Wang,Q., Hirohashi,Y. and Greene,M.I.
  TITLE     DIPA, which can localize to the centrosome, associates with
            p78/MCRS1/MSP58 and acts as a repressor of gene transcription
  JOURNAL   Exp Mol Pathol 81 (3), 184-190 (2006)
   PUBMED   17014843
REFERENCE   4  (bases 1 to 1016)
  AUTHORS   Bezy,O., Elabd,C., Cochet,O., Petersen,R.K., Kristiansen,K.,
            Dani,C., Ailhaud,G. and Amri,E.Z.
  TITLE     Delta-interacting protein A, a new inhibitory partner of
            CCAAT/enhancer-binding protein beta, implicated in adipocyte
            differentiation
  JOURNAL   J Biol Chem 280 (12), 11432-11438 (2005)
   PUBMED   15644333
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            JAXUCZ010000001.1.
            
            On Jan 27, 2022 this sequence version replaced XM_006230939.4.
            
            ##Evidence-Data-START##
            Transcript is intronless :: SRR22582424.2236120.1,
                                        SRR22399481.440515.1 [ECO:0000345]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on conservation, longest protein
            ##RefSeq-Attributes-END##
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-1016              JAXUCZ010000001.1  212192979-212193994 c
FEATURES             Location/Qualifiers
     source          1..1016
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN"
                     /db_xref="taxon:10116"
                     /chromosome="1"
                     /map="1q43"
     gene            1..1016
                     /gene="Ccdc85b"
                     /gene_synonym="RGD1565319"
                     /note="coiled-coil domain containing 85B"
                     /db_xref="GeneID:309161"
                     /db_xref="RGD:1565319"
     exon            1..1016
                     /gene="Ccdc85b"
                     /gene_synonym="RGD1565319"
                     /inference="alignment:Splign:2.1.0"
     CDS             166..774
                     /gene="Ccdc85b"
                     /gene_synonym="RGD1565319"
                     /note="isoform 1 is encoded by transcript variant 1;
                     coiled-coil domain-containing protein 85B"
                     /codon_start=1
                     /product="coiled-coil domain-containing protein 85B
                     isoform 1"
                     /protein_id="NP_001387708.1"
                     /db_xref="GeneID:309161"
                     /db_xref="RGD:1565319"
                     /translation="MEAEAGGLEELTDEEMAALGKEELVRRLRREEAARLAALVQRGR
                     LMQEVNRQLQGHLGEIRELKQLNRRLQAENRELRDLCCFLDSERQRGRRAARQWQLFG
                     TQASRAVREDLGGCWQKLAELEGRQEELLRENLALKELCLALGEEWGPRGGPGGAVGS
                     GAGPTPELALPPCGPRDLGDGSSSTGSVGSPDQLPLACSPDD"
ORIGIN      
        1 tgcctcgtgc ccaccccaaa gtagccgctg cagcctacgc tgcctcgttc actgcctacg
       61 gtcctcggag ccagacccgg gccggagcct gagcggcaac cggcccgagg aggggcttca
      121 gagccgcggc cgtgggcggg cgatgctgca gctgcctgat caactatgga ggccgaggca
      181 ggcggcctgg aggagctgac ggacgaggag atggcggcgc tgggtaagga ggagctggtg
      241 cggcgcctac ggcgggagga ggcggcgcgc ctggcagcgc tggtgcagcg cggccgcctg
      301 atgcaggagg tgaatcggca gctgcagggt cacctgggtg agatccgtga gctcaaacag
      361 ctcaaccggc gtctgcaggc ggagaaccgg gagctgcgcg acctctgctg cttcctggac
      421 tcagagcgcc aacgaggacg gcgtgcggcg cgccagtggc agctctttgg gacccaagca
      481 tcccgggcgg tgcgcgagga cctgggtggt tgttggcaga agctagccga gctggaaggc
      541 cgccaggagg agctgctgcg ggaaaatctg gcccttaagg agctttgcct agcactgggc
      601 gaagagtggg gcccccgtgg tggccccggc ggcgcagtgg gctcaggtgc tgggcccaca
      661 cccgagctcg ccctgccacc gtgcgggccc cgcgacctag gcgatggaag ttccagcact
      721 ggcagtgtgg gcagcccgga tcagttgccc ctagcctgct ctcctgatga ctgagggcgc
      781 cgcattttcc acgccaatgc ctgcctggat tgctctctga gcgcggggaa tgccgtggac
      841 ctccagacct ggtcgcagct tcggctgagc accagggcgc tggcatggac tgaaaaagcc
      901 ctggcactga ggagggcccc tcgctcttgc tggcagagca gcaggggaat ggagactgaa
      961 gtggagggac ttgctgggtg gttgggtggg gactaataaa ctgggaagga agcaga
//
