LOCUS       XM_008759644            1843 bp    mRNA    linear   ROD 11-JUN-2023
DEFINITION  PREDICTED: Rattus norvegicus coiled-coil domain containing 83
            (Ccdc83), transcript variant X1, mRNA.
ACCESSION   XM_008759644
VERSION     XM_008759644.3
DBLINK      BioProject: PRJNA677964
KEYWORDS    RefSeq.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_051336.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            [WARNING] On Feb 22, 2024 this sequence was replaced by
            XM_008759644.4.
            
            On Jan 21, 2021 this sequence version replaced XM_008759644.2.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_015227675.2-RS_2023_06
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.1
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 06/06/2023
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1843
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN/NHsdMcwi"
                     /db_xref="taxon:10116"
                     /chromosome="1"
                     /sex="male"
                     /tissue_type="kidney"
                     /geo_loc_name="USA: Wisconsin, Milwaukee, Medical College
                     of Wisconsin"
                     /collection_date="2019-03-08"
                     /collected_by="Rebecca Schilling"
     gene            1..1843
                     /gene="Ccdc83"
                     /note="coiled-coil domain containing 83; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 2 ESTs, 2 Proteins, and 100% coverage of the annotated
                     genomic feature by RNAseq alignments, including 3 samples
                     with support for all annotated introns"
                     /db_xref="GeneID:680270"
                     /db_xref="RGD:1594161"
     CDS             289..1518
                     /gene="Ccdc83"
                     /codon_start=1
                     /product="coiled-coil domain-containing protein 83"
                     /protein_id="XP_008757866.3"
                     /db_xref="GeneID:680270"
                     /db_xref="RGD:1594161"
                     /translation="MDSSAKGSKKDAPDGPPKDSKMPVSEALLDYHREIKENAVERFT
                     FHIRKLRDKNQKYLERNRRLKEEQNWHLKNLIKELKDEKLDVVQPITREDVEEAMKEK
                     WKFERDQEAHLKEMRVQISEAEKLFLEKLSEKEYWEEYKNVGSAQHAELILSLQNDID
                     TVKENAEKMSEQYKVTLEDTRKKIIRETLILLEQRKEWATQNAVRFIDKNNYREIWEN
                     DWLKKEIKIHRKEVEELETCIHQLEEENLLLIEQLFNCRLVDLKIPRKLYITQAAGLQ
                     VTPEDESLNLPDANTAPEENLQLPSKEESDDRLDLLLGSSYGISSPDSQPKKTGSKEG
                     SCTEIEDPIVKYLVQEDEQDFKEYVNLGPLALKLMSVQGKKMPIHFQEKEMPIEFYED
                     MRNPESHITHKMMKTFL"
ORIGIN      
        1 gaggatgttg ggagaaagct tacatccttg tgtgacttct gacttctaca atctgtcccc
       61 aaaaatttat aggagccctc ccccactaca tccgacactc cctcctcttg atttgtcctg
      121 acacgagatg agcctggggt cgtgccctct gatttttccc tcagagcgtt gttcctgggc
      181 ggttaaaaac tgttgagaga ggttctccaa ggcgcatccc tctttcacca ctggttttag
      241 cagtcctaaa cttaaaggtg tatatagtct tggtggtcaa ccagaaccat ggacagctcg
      301 gcaaaaggaa gtaaaaagga tgcgcctgat ggaccaccaa aagactcgaa gatgcctgtc
      361 agcgaggcac ttctggacta ccatcgtgaa ataaaggaga atgcagtgga gcgattcaca
      421 ttccacatca ggaagctgag ggacaagaat caaaaatacc ttgaaaggaa cagacgcttg
      481 aaagaggaac agaactggca cttaaagaat ctcataaaag aactgaagga tgagaagctg
      541 gatgttgtac aacccataac aagagaggac gtggaggagg caatgaagga aaaatggaag
      601 tttgaaagag accaggaggc tcacttgaaa gaaatgcgcg tacaaataag tgaggctgag
      661 aagctattcc ttgaaaaact cagtgaaaag gaatattggg aagagtacaa gaatgtaggg
      721 agtgcacagc atgctgaact cattctttcc ttacaaaatg acatcgacac agttaaagaa
      781 aatgcagaga aaatgtcaga acagtataaa gtcaccctgg aagatactag gaagaaaata
      841 atcagagaaa cattgatcct actggaacag aggaaagaat gggccacaca gaatgctgta
      901 aggttcattg acaagaacaa ctatcgagag atctgggaga atgactggct aaaaaaagaa
      961 atcaagattc acaggaagga agtcgaagag ttggaaactt gtattcatca actagaagag
     1021 gaaaatctac tgcttattga gcagttattt aactgcagac tcgtggatct caaaataccc
     1081 aggaaactgt acattactca agccgctggg ctgcaagtga cacccgaaga cgaatctttg
     1141 aatttgccag acgcaaacac agccccagag gagaatttgc agttgccctc caaagaggag
     1201 agtgacgaca ggttggacct cttactgggg agcagctatg ggattagcag cccagatagc
     1261 cagcccaaga agacaggaag taaagaaggc tcctgtacag agatagagga ccccatcgtc
     1321 aagtacttgg tgcaagaaga tgaacaagat ttcaaggaat atgtaaactt gggcccactg
     1381 gcattgaagc taatgagtgt gcagggcaag aaaatgccca ttcattttca agaaaaggag
     1441 atgccaattg aattttatga agacatgcgg aaccctgaaa gccacatcac tcataagatg
     1501 atgaagacgt ttctgtaggc ctggcagcca cgcctttctt tatacattct ttgtgaatta
     1561 aagcgcccaa gtttgctcac acagctgtcc ttcatcagag ctggtgtttc tggtggtcgt
     1621 aattaaaacc ctggcttccg gtattgagac atttcataca cctgtccatc ctgagcgaca
     1681 gaaaacacac tgcttccttt gttggaaatg tttttaagaa acttaggaga tatatatatg
     1741 tgtgtatata tatatatgta atgtaaactt gtctttaatc ctatttataa tgtgaattaa
     1801 tctatctttt gctgagataa agtaccccaa caataggaac tta
//
