LOCUS       XM_039098123            2090 bp    mRNA    linear   ROD 11-JUN-2023
DEFINITION  PREDICTED: Rattus norvegicus coiled-coil domain containing 7B
            (Ccdc7b), transcript variant X1, mRNA.
ACCESSION   XM_039098123
VERSION     XM_039098123.1
DBLINK      BioProject: PRJNA677964
KEYWORDS    RefSeq.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_051354.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            [WARNING] On Feb 22, 2024 this sequence was replaced by
            XM_039098123.2.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_015227675.2-RS_2023_06
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.1
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 06/06/2023
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2090
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN/NHsdMcwi"
                     /db_xref="taxon:10116"
                     /chromosome="19"
                     /sex="male"
                     /tissue_type="kidney"
                     /geo_loc_name="USA: Wisconsin, Milwaukee, Medical College
                     of Wisconsin"
                     /collection_date="2019-03-08"
                     /collected_by="Rebecca Schilling"
     gene            1..2090
                     /gene="Ccdc7b"
                     /note="coiled-coil domain containing 7B; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 1 mRNA, 4 ESTs, 7 Proteins, and 100% coverage of the
                     annotated genomic feature by RNAseq alignments, including
                     3 samples with support for all annotated introns"
                     /db_xref="GeneID:497041"
                     /db_xref="RGD:1359250"
     CDS             432..1970
                     /gene="Ccdc7b"
                     /codon_start=1
                     /product="coiled-coil domain-containing protein 7 isoform
                     X1"
                     /protein_id="XP_038954051.1"
                     /db_xref="GeneID:497041"
                     /db_xref="RGD:1359250"
                     /translation="MKRANHLSTTSKKSTGVPELPHKKGKLNSSHKTKEKHNAKPTYE
                     KIEPMVLRSPPTGESIVRYALPIPSTMTKDLVSDAEMVRRIAKNLKMVVSSLENTYGV
                     HSDDGEKEEEKPEEEEEEEEEEEEEEYVSVGDDMNSFLLCCSQFAAQLEEAVKEERNI
                     LESLYKWFQQQVNQMEEISKDQSNLQRDIPSDKFVKLGITQIAKLLHKFEEIRNRLRE
                     RKVSEKSKEPEKEVVAEPTKTYELIEKEIEEFIKSHSDIEFQTVSETESGTPSSMTNR
                     VSVMMKIFENQTTMLQKALNDQTEAEAKCKVMETNYEILLSEKNLLESEIQQLKEIER
                     LKSTTKEDRTKKTGKSEKKKDKDSERKISPNGELHSFEELAEIQEAERSKSQLNLALN
                     QKTAVPKEGKSKTKLDRAQSKSKVKVEDSKDSLLKKSDTQSAGQRQDQEAERSKSQLN
                     LALNQKTAVPKEGKSKTKLDRAQSKSKVKVEDSKDSLLKKSDTQSAGQRQDQTSSDQS
                     KRAK"
ORIGIN      
        1 ccccggtgcg ccagggatca gggtgggcca ggcgcgtgcc ctgtggtccg ttgttaccac
       61 ccggggccca aaggcccact tttccctttc agcacagatg tcagtttgta ctggggcaga
      121 gcagttgtct ggggagtttg ctggcgtctt ccaaagagat ctaggagact caggatttac
      181 aactttctca ggcaaataga ttcccacctg cctccccaaa gtcaagtcac ccagtaagac
      241 aactgccaac agcctcagca gcatccagat cctccttaag agcacagtgc attcacacaa
      301 agccaacatg gcatacaatt cacaacttac cttcaagacg atgaaggcac agaggggata
      361 acagatcctg cagcacaact ggaggtactg aatttttcgc atataacttg gaagctaaat
      421 tagccacaaa aatgaagaga gcaaatcatc tctcgaccac tagtaagaag tcaacaggtg
      481 ttccagaatt acctcataag aaaggaaaac tgaattcatc acataagaca aaagaaaaac
      541 ataatgccaa gcctacatat gaaaaaattg aaccaatggt cctcaggtct ccacccacag
      601 gagagtcaat tgtacggtat gccttgccaa taccatcaac tatgacgaaa gacttagtat
      661 cagatgctga aatggtcagg aggattgcca aaaacctgaa gatggttgtt tcttccttgg
      721 aaaacaccta tggagttcac agtgatgatg gagaaaaaga agaagaaaaa cctgaagaag
      781 aagaagaaga agaggaagaa gaagaagaag aagaatacgt atctgttggt gatgatatga
      841 attcattctt gttgtgctgt tcacaatttg ccgctcagct ggaggaagca gttaaggaag
      901 aacgtaatat tttagagtct ctttacaagt ggtttcagca acaagtcaac caaatggagg
      961 agataagtaa agaccaaagt aatttacaaa gagatattcc atcagataag ttcgtcaaat
     1021 tgggcattac acaaattgcg aagctcttac ataaatttga agaaattaga aatcgcctaa
     1081 gggagcgtaa ggtgtctgag aagtctaaag agccggaaaa agaggttgta gctgaaccaa
     1141 cgaaaactta tgaacttata gaaaaggaaa ttgaagagtt cataaaatcc cattcagata
     1201 tagaatttca aactgtttct gaaactgagt caggtactcc ttcttcaatg actaatcggg
     1261 tttctgtgat gatgaaaata tttgaaaatc agacaactat gttacagaaa gctttaaatg
     1321 atcagactga agctgaggct aaatgtaaag tgatggaaac taattacgaa atattattat
     1381 cagaaaaaaa cctgctggaa agtgaaatac aacagctgaa ggaaatagag aggttaaagt
     1441 ctacaaccaa agaagatcga accaagaaaa ctggaaaatc agaaaagaaa aaagataaag
     1501 attcagaaag gaagatatct ccaaatggag aacttcactc atttgaagaa ctggctgaaa
     1561 tccaagaagc tgaaagaagt aagtctcaac tcaaccttgc cctaaatcaa aagacagcgg
     1621 tgcctaaaga ggggaagagc aaaacaaaac tggaccgggc tcaaagtaaa tcaaaggtta
     1681 aggttgaaga ttcaaaagat tccctactga agaagagtga cacacagtcc gctggacaga
     1741 ggcaggatca ggaagctgaa agaagtaagt ctcaactcaa ccttgcccta aatcaaaaga
     1801 cagcggtgcc taaagagggg aagagcaaaa caaaactgga ccgggctcaa agtaaatcaa
     1861 aggttaaggt tgaagattca aaagattccc tactgaagaa gagtgacaca cagtccgctg
     1921 gacagaggca ggatcagacc tcatctgatc agagtaaaag agccaaatag aatttttgaa
     1981 gtactttgga agaccctcga cctttccaga gtggacagaa gcagaaggag attcccacct
     2041 cagcagatat gtggcattgc ttgcaataaa aaacattctt ctgctcttgc
//
