LOCUS       NM_001191752            2441 bp    mRNA    linear   ROD 24-JUN-2024
DEFINITION  Rattus norvegicus coiled-coil domain containing 77 (Ccdc77), mRNA.
ACCESSION   NM_001191752 XM_232333
VERSION     NM_001191752.1
KEYWORDS    RefSeq.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
REFERENCE   1  (bases 1 to 2441)
  AUTHORS   Jakobsen,L., Vanselow,K., Skogs,M., Toyoda,Y., Lundberg,E.,
            Poser,I., Falkenby,L.G., Bennetzen,M., Westendorf,J., Nigg,E.A.,
            Uhlen,M., Hyman,A.A. and Andersen,J.S.
  TITLE     Novel asymmetrically localizing components of human centrosomes
            identified by complementary proteomics methods
  JOURNAL   EMBO J 30 (8), 1520-1535 (2011)
   PUBMED   21399614
REFERENCE   2  (bases 1 to 2441)
  AUTHORS   Ghosh,D., Lippert,D., Krokhin,O., Cortens,J.P. and Wilkins,J.A.
  TITLE     Defining the membrane proteome of NK cells
  JOURNAL   J Mass Spectrom 45 (1), 1-25 (2010)
   PUBMED   19946888
COMMENT     PROVISIONAL REFSEQ: This record has not yet been subject to final
            NCBI review. The reference sequence was derived from
            JAXUCZ010000004.1.
            
            On Jul 17, 2010 this sequence version replaced XM_232333.5.
            
            Sequence Note: The RefSeq transcript and protein were derived from
            genomic sequence to make the sequence consistent with the reference
            genome assembly. The genomic coordinates used for the transcript
            record were based on alignments.
            
            ##Evidence-Data-START##
            Transcript exon combination :: SRR21887620.360268.1,
                                           SRR21887620.360269.1 [ECO:0000332]
            RNAseq introns              :: mixed sample support SAMEA5760383,
                                           SAMEA5760386 [ECO:0006172]
            ##Evidence-Data-END##
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-38                JAXUCZ010000004.1  155228907-155228944 c
            39-276              JAXUCZ010000004.1  155226223-155226460 c
            277-419             JAXUCZ010000004.1  155224626-155224768 c
            420-516             JAXUCZ010000004.1  155219864-155219960 c
            517-580             JAXUCZ010000004.1  155216758-155216821 c
            581-672             JAXUCZ010000004.1  155215099-155215190 c
            673-821             JAXUCZ010000004.1  155212281-155212429 c
            822-1041            JAXUCZ010000004.1  155211626-155211845 c
            1042-1167           JAXUCZ010000004.1  155209621-155209746 c
            1168-1320           JAXUCZ010000004.1  155209378-155209530 c
            1321-2441           JAXUCZ010000004.1  155206402-155207522 c
FEATURES             Location/Qualifiers
     source          1..2441
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN"
                     /db_xref="taxon:10116"
                     /chromosome="4"
                     /map="4q42"
     gene            1..2441
                     /gene="Ccdc77"
                     /gene_synonym="RGD1310710"
                     /note="coiled-coil domain containing 77"
                     /db_xref="GeneID:312677"
                     /db_xref="RGD:1310710"
     CDS             1..1467
                     /gene="Ccdc77"
                     /gene_synonym="RGD1310710"
                     /codon_start=1
                     /product="coiled-coil domain-containing protein 77"
                     /protein_id="NP_001178681.1"
                     /db_xref="GeneID:312677"
                     /db_xref="RGD:1310710"
                     /translation="MNFTPTHTPICRKITVASRRGAGSGFDDTNRWKKMADSVESTPL
                     PSIEDRLAVLRPSQELLEYYQKKMANFEAENEDVLKKLELYRETCEEQHNLEWSLQQR
                     EGEIAELQRALSDMQVCLFQEREHVLRLYSENDRLRIRELEDKKKIQNLLALVGTDTG
                     EVTYFLKEPPHKASILQKTIQAVDVCEPSASKADPTVSKRRIRVKDKEDISERYQRDI
                     QTLLLQVEALQAQLGEQTKLSREQVEGLMEDRRIRIEEIQVQHQRNQEKIKELTKSLH
                     HTQELLYQSTKDFLQLKFENQNKEKLWMLERDHLMSVMKQHRAQYRKKEDKLGKVVPT
                     LHENHHAQNEYVKSLKDKLTQEKKLSNMYQEQCISLEEELARIREEEGVRREIFKDRS
                     NKMGKRLQIMTRRYQALEHRRILEVEGFKTDIKALRQKLRDLEQTLYKATMNTHGNQD
                     LAILCEVRDSNRRAHKIQGELKSLKSKMFSLENELRLC"
     exon            1..38
                     /gene="Ccdc77"
                     /gene_synonym="RGD1310710"
                     /inference="alignment:Splign:2.1.0"
     exon            39..276
                     /gene="Ccdc77"
                     /gene_synonym="RGD1310710"
                     /inference="alignment:Splign:2.1.0"
     exon            277..419
                     /gene="Ccdc77"
                     /gene_synonym="RGD1310710"
                     /inference="alignment:Splign:2.1.0"
     exon            420..516
                     /gene="Ccdc77"
                     /gene_synonym="RGD1310710"
                     /inference="alignment:Splign:2.1.0"
     exon            517..580
                     /gene="Ccdc77"
                     /gene_synonym="RGD1310710"
                     /inference="alignment:Splign:2.1.0"
     exon            581..672
                     /gene="Ccdc77"
                     /gene_synonym="RGD1310710"
                     /inference="alignment:Splign:2.1.0"
     exon            673..821
                     /gene="Ccdc77"
                     /gene_synonym="RGD1310710"
                     /inference="alignment:Splign:2.1.0"
     exon            822..1041
                     /gene="Ccdc77"
                     /gene_synonym="RGD1310710"
                     /inference="alignment:Splign:2.1.0"
     exon            1042..1167
                     /gene="Ccdc77"
                     /gene_synonym="RGD1310710"
                     /inference="alignment:Splign:2.1.0"
     exon            1168..1320
                     /gene="Ccdc77"
                     /gene_synonym="RGD1310710"
                     /inference="alignment:Splign:2.1.0"
     exon            1321..2441
                     /gene="Ccdc77"
                     /gene_synonym="RGD1310710"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 atgaatttta ctccgacaca tacacccatc tgcagaaaaa taacagttgc ctccaggcgc
       61 ggtgctggct ctggctttga tgataccaac aggtggaaga aaatggcaga ctcagtggag
      121 tcaactcccc tgccttcaat agaggatcgt ctggctgtcc ttcgcccttc tcaggagctt
      181 ctggagtatt atcagaagaa gatggctaac tttgaggcag agaatgaaga tgtgctgaag
      241 aagttagagc tctacagaga aacttgtgaa gaacagcata acctcgagtg gagcttgcag
      301 cagagagagg gagagattgc tgaactgcag agagccctga gcgacatgca ggtctgcctc
      361 ttccaggaaa gggagcatgt cctacgactc tactcagaga atgaccggct aaggatcagg
      421 gagctggagg acaagaaaaa gattcagaat ctattggctc ttgtgggaac agataccggc
      481 gaagtgacct attttcttaa ggagcctcct cacaaggcca gcattctcca gaagactatc
      541 caggccgtag atgtgtgtga gccttcagct tccaaagcag atcctacagt aagcaaaaga
      601 cgaataagag taaaggacaa ggaagacatt tctgagcgtt accagaggga catacagaca
      661 ctcctcctgc aggtggaagc acttcaggcc cagctgggag agcagacaaa gctttctaga
      721 gaacaagtcg aagggctcat ggaggacaga cggatccgaa tcgaggagat ccaagttcag
      781 caccagagaa atcaagagaa aatcaaagag ctgaccaaga gtctccatca tacccaagaa
      841 ctgctctacc agagcaccaa agactttcta caactaaaat ttgaaaacca aaataaagag
      901 aagttgtgga tgcttgaaag agaccacctg atgtcagtga tgaagcagca cagagcgcag
      961 tacaggaaga aagaagacaa gcttgggaaa gtcgttccca ctttacatga gaatcatcat
     1021 gctcagaatg agtatgtgaa gtctcttaag gataagctaa cacaagagaa aaagctgtcc
     1081 aacatgtacc aagaacagtg catttcccta gaagaggaac ttgctcgaat tcgggaggaa
     1141 gaaggagtga ggagagagat cttcaaggat cgctccaaca agatgggcaa gcgcttacag
     1201 ataatgacaa gacgctatca ggccttggag catcgacgaa tcctggaagt agagggcttc
     1261 aagacagaca ttaaggctct ccgacagaag ctgagagacc tggagcaaac gctctataag
     1321 gcaaccatga acacccatgg aaatcaggat ctggccattc tgtgtgaagt ccgtgatagc
     1381 aacaggagag ctcataagat acaaggagag ctgaagagcc tcaagtctaa aatgttcagt
     1441 ctagagaatg agcttaggct gtgttgatgt ctcctttcag ggttggtttc cagaaacctg
     1501 aggcaaggtc acctgttcct ggagagtgga catggagttg tccagagtag tgacatcagt
     1561 tttaatgaag atagtgttaa aggcatgata gctcacacct acaatcccag cacttgggaa
     1621 actgagccag gtggatctct ctgattctag accatccaag gctacttaat aagaccccat
     1681 ctccaaaaac aacaaaaata aaacatcaaa accagagagg aaagaagaaa accagaaaac
     1741 agtggcaaat ctggccctgg gaaagctgca ctagcagact gccgtctccg gtggccctgc
     1801 tcgcctcact gggggtagga actgtggccg agactttcct gctcttccat tgtatatgga
     1861 tggactttcc tgtctataaa gtcagtgatg ggatgtaact tacctgggga agtgcttgtc
     1921 caccgtacgg aaagcccggg ttctgttgct agcaccacct aaagccaggg ttggtggctc
     1981 cctgcagtca ccactggaaa gagaagtatg taggagaatc tgaagttcac attcaccctt
     2041 ggctgtgtgg tgagttccag gctagcctgg gctacataag accgtgtcta aaaatgaaaa
     2101 caagaaacaa acaaaaacaa gaaaacaaac taagtgccag tgggagaaca tgtttccagg
     2161 agggccaaag tcattcacta aagtgcattc ctactcaggg aaggaaggaa gcagcaaatt
     2221 acatgggcag attcacggac ttagctgtgc ccaagtgact gaccaccagg gggcagcaga
     2281 gcccttgctc ctcagtaaac ttggtcatca agaaaagggt gctactttat gtacagtagg
     2341 caaaaccaat atggtaattt atgtgaagaa gtttaacatt ttatcaatat tttttagatt
     2401 attcaaatta atattttcaa taaaatgtag tgtttaaaac a
//
