LOCUS       NM_001419901            1261 bp    mRNA    linear   ROD 31-MAR-2024
DEFINITION  Rattus norvegicus coiled-coil domain containing 74A (Ccdc74a),
            transcript variant 1, mRNA.
ACCESSION   NM_001419901 XM_001058720
VERSION     NM_001419901.1
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            JAXUCZ010000011.1.
            
            On Apr 21, 2023 this sequence version replaced XM_001058720.6.
            
            ##Evidence-Data-START##
            Transcript exon combination :: SRR22582419.143736.1,
                                           SRR26643293.70096.1 [ECO:0000332]
            RNAseq introns              :: mixed sample support SAMEA5760383,
                                           SAMEA5760389 [ECO:0006172]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on conservation, expression,
                                      longest protein
            ##RefSeq-Attributes-END##
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-298               JAXUCZ010000011.1  96864243-96864540   c
            299-343             JAXUCZ010000011.1  96863333-96863377   c
            344-403             JAXUCZ010000011.1  96862842-96862901   c
            404-569             JAXUCZ010000011.1  96861965-96862130   c
            570-753             JAXUCZ010000011.1  96860990-96861173   c
            754-833             JAXUCZ010000011.1  96860829-96860908   c
            834-890             JAXUCZ010000011.1  96860698-96860754   c
            891-1261            JAXUCZ010000011.1  96860161-96860531   c
FEATURES             Location/Qualifiers
     source          1..1261
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN"
                     /db_xref="taxon:10116"
                     /chromosome="11"
                     /map="11q23"
     gene            1..1261
                     /gene="Ccdc74a"
                     /note="coiled-coil domain containing 74A"
                     /db_xref="GeneID:680752"
                     /db_xref="RGD:1588214"
     exon            1..298
                     /gene="Ccdc74a"
                     /inference="alignment:Splign:2.1.0"
     CDS             40..1134
                     /gene="Ccdc74a"
                     /note="isoform 1 is encoded by transcript variant 1;
                     coiled-coil domain-containing protein 74B; coiled-coil
                     domain-containing protein 74A"
                     /codon_start=1
                     /product="coiled-coil domain-containing protein 74B
                     isoform 1"
                     /protein_id="NP_001406830.1"
                     /db_xref="GeneID:680752"
                     /db_xref="RGD:1588214"
                     /translation="MSGAGLAAGARPLSSAAPGSRGAARLRPRPPAGPQHAGTQPPPL
                     GLSEAQKRILDLEKSLQFLQQQHSETLVKLHEEIEHLKRENKDLHYKLIMNEKPQKKG
                     SISTWSLHSGKSTSNSTTSANSQGKTRPQPNSFKKQELKSDALQKTDLEEQSLSSAAL
                     SQSSKLDRAPGAQGQAKDEDAEASNSGATLVGGSHGRQGTGTAPLMSLPPHLRKPTTV
                     QQCEVVIRQLWNANLLQAQELQHLKSLLEGNQRPKAAAEEAGLGSPKDQDSMQFPKVT
                     AKSLSKKCLILSPMPAAERGILPALKQSLKTSFAERQKRLQVVQSRRLHRSVLLSRRP
                     GARPSPLENGSHQPYFAATRNSKTDRTHDR"
     exon            299..343
                     /gene="Ccdc74a"
                     /inference="alignment:Splign:2.1.0"
     exon            344..403
                     /gene="Ccdc74a"
                     /inference="alignment:Splign:2.1.0"
     exon            404..569
                     /gene="Ccdc74a"
                     /inference="alignment:Splign:2.1.0"
     exon            570..753
                     /gene="Ccdc74a"
                     /inference="alignment:Splign:2.1.0"
     exon            754..833
                     /gene="Ccdc74a"
                     /inference="alignment:Splign:2.1.0"
     exon            834..890
                     /gene="Ccdc74a"
                     /inference="alignment:Splign:2.1.0"
     exon            891..1261
                     /gene="Ccdc74a"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 aggctccagc agccagtact gagcggcggc aacgccttca tgagcggggc cgggctggcg
       61 gccggggcgc ggcccctcag ctccgcggcc ccaggctccc ggggtgcggc ccgcctacgc
      121 ccgcgccctc ccgccggccc gcagcacgcg gggacacagc cgcctcccct cgggctcagc
      181 gaggcacaga agcggatcct ggacctggaa aagagcctgc agttcctaca gcagcagcac
      241 tcggagacgc tggtcaaact ccacgaggaa atcgagcact tgaaacggga gaacaaggat
      301 ctccactaca agctaatcat gaatgagaag cctcagaaaa aaggcagcat ctccacatgg
      361 agccttcact ctggcaagtc cacctccaat tccacaacat ccgccaactc tcaaggcaag
      421 accaggcccc agcccaactc cttcaagaaa caagagctga agtctgacgc cctccaaaag
      481 acagacctgg aagagcagtc actcagcagt gctgccctgt cccaaagcag caagctggac
      541 agagcccctg gggctcaggg acaggccaaa gacgaggatg cagaggcctc taattcaggg
      601 gccacgttgg tggggggcag ccatggccgg caagggacgg ggacggcccc cttaatgagc
      661 ctgcccccgc acctgcgcaa gcctaccaca gtgcagcagt gtgaggtggt catccgtcag
      721 ctgtggaacg ccaacctcct gcaggcccag gagctacagc acctcaagtc actcctggaa
      781 gggaaccaaa ggcccaaagc tgcagctgag gaggctgggc tgggctctcc aaaggaccag
      841 gactccatgc agttccccaa ggtcaccgcc aagagcctta gtaagaagtg cctaattctg
      901 agcccaatgc ctgctgcaga gcgcggcatt ctgcctgcgt tgaaacagag cctgaagacc
      961 agctttgctg agcggcagaa acggctgcag gtggtgcaga gccgacgcct gcaccgctct
     1021 gtgctgctga gccggcgccc tggagcccgg ccatcccctc tcgagaatgg ttcacaccaa
     1081 ccctattttg cagccacacg caattccaag acagacagaa cccatgacag ataaaaccac
     1141 gtgctctcag aaatgaggag actgtatttt ctctatttta ctatccctgc atttatgcaa
     1201 aggccataat agaatgttac gtcctctccc tgtagactga aaataaaaat tgtttctcct
     1261 a
//
