LOCUS       XM_006234667            3459 bp    mRNA    linear   ROD 11-JUN-2023
DEFINITION  PREDICTED: Rattus norvegicus coiled-coil domain containing 73
            (Ccdc73), transcript variant X1, mRNA.
ACCESSION   XM_006234667
VERSION     XM_006234667.4
DBLINK      BioProject: PRJNA677964
KEYWORDS    RefSeq.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_051338.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            [WARNING] On Feb 22, 2024 this sequence was replaced by
            XM_006234667.5.
            
            On Jan 21, 2021 this sequence version replaced XM_006234667.3.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_015227675.2-RS_2023_06
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.1
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 06/06/2023
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3459
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN/NHsdMcwi"
                     /db_xref="taxon:10116"
                     /chromosome="3"
                     /sex="male"
                     /tissue_type="kidney"
                     /geo_loc_name="USA: Wisconsin, Milwaukee, Medical College
                     of Wisconsin"
                     /collection_date="2019-03-08"
                     /collected_by="Rebecca Schilling"
     gene            1..3459
                     /gene="Ccdc73"
                     /note="coiled-coil domain containing 73; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 2 Proteins, and 91% coverage of the annotated genomic
                     feature by RNAseq alignments, including 3 samples with
                     support for all annotated introns"
                     /db_xref="GeneID:499848"
                     /db_xref="RGD:1563448"
     CDS             247..3459
                     /gene="Ccdc73"
                     /codon_start=1
                     /product="coiled-coil domain-containing protein 73"
                     /protein_id="XP_006234729.1"
                     /db_xref="GeneID:499848"
                     /db_xref="RGD:1563448"
                     /translation="MNINMEDSFNTKPSASTFTLQSSSETMVSIQLLDFRTSLLEALE
                     ELRMRREAETQYEEQIAKIIMETQELNWQKETLQNQKEALIKQHKEAMGVFKNQLQMK
                     IYALEEEKGKYKLATEIKEKEIEGLKETLKTLQVSQYSLQKKVSEMEQKAHLHHLAKE
                     DYHKQLNEIEKYYVTITNQFGLVRENHVKLEQNVQEAIQLNKRLSTLNEKQESEIHRL
                     KKELKKAASELIKSKVTCQHKMEGESIDLIIKEQKYEELQERLNVELELNRKINEEIT
                     HIQEEKQDIIISFQHMQQLLQQETQANGEVSAELKVLREKNQTLERDNELQREKVKEN
                     EGKFLNLEKEHERALGTWKKQVEELSGEMNRIKSELSSLKETHVKLQEHYNKLYEQNK
                     NEECKKFQNVPELNNENGDELSSKKSKNTIVQKYNSGQEIWGENTKSCLDTEYREREE
                     TRDLPVGKTAEDLQPLEISAKSEINTMISQERNQSGMSPHKVLCLDKDVTDQEQTSNV
                     TDSRKSIPGEVKDKLCLEKASGCSEFKSLNNFFLVVDESLETEKICLEGTEGLGLPHT
                     AVDVPLDTRSSKASFNGVSNEMAHKRNHNTDASESSPFKHQFKLLPADLENATEKEIT
                     NHDQNKASLDSLLDIKLNLDLCKKHGLQDSCNVMLDVKYQKIKQMLREECQCSIEPCS
                     CYQSARETPQPGATAACAAAIGLSGPSASPGNDSTAPKKPEHSVSTVPTAVKPSSSPA
                     ERTTRTNVNDIQNSPLKNHSGTSESSVGISDFQVSPGDSHAPQAQDFKTAVPLTTSTE
                     KQLPSDNQITEAPESGLFSLVGVKERQCMLISNREKAEALDDILSEETCCEGQLGEAH
                     LSHVTPSADSVNTSARSAFDLPTPDKKREETPGYMKFVAPSCRPKINQSQTAGTVTSS
                     IPSLLKEKPVGVSENRVTAPVTFRKNDGLEDTRKNIGSDPISTSRVADTVSNWSIHLD
                     PKGQPSEERNATAQTVHESSFPTEHGKAEPLTSTVQQSHSQTSKVTDTLDPFTFCPGR
                     KDWQSLVMNQLTEIGKLLSLENDNQPKRRKVEEMLDKVID"
ORIGIN      
        1 gacccggaaa tgctgagtac taagcggtct tccctgaggt aactcaactt ccgtgctgag
       61 cgctgtttag gaagtcgctc taacacttcc acccagtgtt attataaagg ttgccctgga
      121 gctcaggtgt cccaccaaat cctcatgctg acttctccgg gcctggtcgt ccttgagtct
      181 cctgtcaggt gttcctagaa tcttccgcca cgagacgcac cacccatcag gtttactgga
      241 aatgaaatga atattaacat ggaggacagt ttcaacacca aaccatcagc atctaccttt
      301 acacttcaga gttcctcaga gacaatggtt tctatccagc tcctcgattt cagaacaagt
      361 ttacttgaag cactagaaga gctgcgtatg agaagggaag cagagactca atatgaagag
      421 cagattgcta aaattattat ggagacacaa gaactgaact ggcaaaagga gactcttcag
      481 aatcaaaagg aggcattaat aaagcaacac aaagaagcaa tgggagtttt taaaaatcag
      541 ctgcaaatga agatttatgc cttggaagaa gaaaagggaa aatacaaact tgctacagaa
      601 atcaaagaaa aagaaataga aggattgaag gaaacattaa aaacactaca ggtttctcaa
      661 tattctttac agaagaaagt gagtgaaatg gaacaaaagg ctcatttaca ccatctagct
      721 aaagaagatt atcacaagca acttaatgaa attgaaaaat actatgttac aataacaaat
      781 cagtttggat tggtgagaga gaatcatgta aagttagaac aaaatgtaca agaagcaata
      841 cagttaaaca aaagactctc caccttaaat gaaaaacagg aatctgaaat tcacagatta
      901 aagaaggaac taaagaaagc agcttcagag ctgattaagt ccaaggtcac ttgtcagcat
      961 aagatggagg gagaaagtat agatctaata attaaagaac aaaaatatga agagcttcaa
     1021 gaaagactca acgtggaatt ggaattaaat agaaaaatta atgaagagat tacccacatt
     1081 caagaagaaa agcaggacat catcatttct tttcaacata tgcagcaatt gcttcagcaa
     1141 gaaactcaag ctaatggtga agtcagtgca gaattgaagg tgctgagaga aaagaatcag
     1201 acccttgaaa gagataatga gctgcaaagg gagaaggtaa aagaaaatga aggaaagttc
     1261 cttaatcttg agaaggagca tgagagagca ctaggaactt ggaagaaaca agtggaagaa
     1321 cttagtggag aaatgaatag gattaaaagt gagttgtcat cccttaagga gacccatgtt
     1381 aagttgcaag aacattacaa caaattatat gaacagaata aaaatgagga atgtaagaag
     1441 tttcagaatg ttccagaact aaataatgaa aatggtgatg aactatctag caaaaaatca
     1501 aaaaatacca tcgtacaaaa gtacaattct ggtcaagaaa tatgggggga aaatacaaag
     1561 agttgtttgg atactgaata cagggaaaga gaagaaacga gagacctacc tgtagggaaa
     1621 actgcagaag acttacagcc tcttgaaata agtgccaaaa gtgaaattaa tactatgata
     1681 tctcaggaga gaaaccaaag tggaatgtcc ccacacaaag tcctttgcct agataaagat
     1741 gtaactgacc aagaacaaac ctcaaatgtt actgacagta gaaaatcaat ccccggagaa
     1801 gtaaaagaca agctgtgctt ggaaaaagcc agtggatgtt cagagtttaa atcattgaac
     1861 aatttctttt tagtggtaga tgaatcacta gaaacagaaa agatatgcct agaaggaact
     1921 gaaggattag gtcttcccca cacagctgta gatgtacctc tggacactcg gagtagcaaa
     1981 gcatccttta atggcgtatc aaatgagatg gctcacaaaa gaaaccataa cacagatgct
     2041 tctgaaagta gcccattcaa acatcaattc aaattgcttc cagcagatct ggaaaatgct
     2101 acagagaagg aaattacaaa tcatgaccaa aacaaagcaa gcttagattc acttctagat
     2161 ataaagctaa atcttgatct gtgtaagaaa catggtttac aggattcatg taatgttatg
     2221 ttagatgtta agtatcaaaa aataaaacaa atgttaagag aagagtgtca gtgcagcata
     2281 gagccctgct cttgttatca gtcagccaga gagactcccc agcctggagc aaccgcggcc
     2341 tgtgctgcag caatcggtct atccggtcca tctgctagcc ctggtaacga ttcgacagcc
     2401 cctaagaaac cggaacacag tgtcagtacc gtgccaacag cagtgaaacc ttcctcaagc
     2461 cctgcagaaa gaactacaag aacaaatgta aatgacatac aaaacagtcc acttaagaac
     2521 cattcgggaa cttctgaaag cagtgtgggc atctcagact ttcaggttag cccgggggac
     2581 agtcatgctc cacaagccca agatttcaaa actgcagttc ccctgacaac ttccaccgaa
     2641 aaacagcttc ccagtgacaa tcagataact gaagctccag aaagtggtct cttttccttg
     2701 gtaggtgtta aggaaagaca atgcatgctg ataagtaaca gagagaaggc agaggcatta
     2761 gatgacatcc tgtcagaaga aacgtgctgt gaaggtcagc tgggagaagc acatttgtct
     2821 catgtaactc catctgcaga ctcagtaaac acaagtgcaa ggtcagcctt tgatcttcct
     2881 actccagata aaaaaagaga ggaaactcca ggctacatga agtttgtagc ccctagttgt
     2941 aggccaaaaa taaaccaaag tcaaaccgca ggcactgtaa cttccagcat cccttcattg
     3001 ctgaaggaga aaccagtagg tgtgtcagaa aacagagtga ctgctccagt gacctttcgt
     3061 aaaaatgatg gtctggagga cactaggaaa aacattgggt cagatcctat cagcactagc
     3121 agagttgctg acactgtgag taactggagc atccatctag atcccaaggg acagcccagt
     3181 gaagagagga atgcaactgc acagacggtt catgagtctt cttttcccac agaacatggg
     3241 aaagcagagc ctttgacttc aactgtgcaa caaagccatt cccagacgag caaggttaca
     3301 gacaccctgg atccattcac cttctgtcct ggtaggaaag actggcagag ccttgtgatg
     3361 aaccaactaa ctgaaattgg aaagttacta agcttagaaa atgacaacca gcccaaaaga
     3421 agaaaagtag aagaaatgct ggataaagta attgattaa
//
