LOCUS       NM_001024904            1668 bp    mRNA    linear   ROD 09-FEB-2025
DEFINITION  Rattus norvegicus coiled-coil domain containing 71 (Ccdc71), mRNA.
ACCESSION   NM_001024904 XM_573961
VERSION     NM_001024904.1
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
REFERENCE   1  (bases 1 to 1668)
  AUTHORS   Wu,T., Zhang,Z., Yuan,Z., Lo,L.J., Chen,J., Wang,Y. and Peng,J.
  TITLE     Distinctive genes determine different intramuscular fat and muscle
            fiber ratios of the longissimus dorsi muscles in Jinhua and
            landrace pigs
  JOURNAL   PLoS One 8 (1), e53181 (2013)
   PUBMED   23301040
COMMENT     PROVISIONAL REFSEQ: This record has not yet been subject to final
            NCBI review. The reference sequence was derived from BC098020.1.
            
            On Jun 17, 2005 this sequence version replaced XM_573961.1.
            
            ##Evidence-Data-START##
            Transcript exon combination :: BC098020.1, FQ098142.1 [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMD00132261, SAMD00132262
                                           [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on conservation, expression
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..1668
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /db_xref="taxon:10116"
                     /chromosome="8"
                     /map="8q32"
     gene            1..1668
                     /gene="Ccdc71"
                     /note="coiled-coil domain containing 71"
                     /db_xref="GeneID:498678"
                     /db_xref="RGD:1566341"
     exon            1..45
                     /gene="Ccdc71"
                     /inference="alignment:Splign:2.1.0"
     exon            46..1640
                     /gene="Ccdc71"
                     /inference="alignment:Splign:2.1.0"
     CDS             98..1408
                     /gene="Ccdc71"
                     /codon_start=1
                     /product="coiled-coil domain-containing protein 71"
                     /protein_id="NP_001020075.1"
                     /db_xref="GeneID:498678"
                     /db_xref="RGD:1566341"
                     /translation="MSMVVQHVEEKAVHSWSRISTAGKKALEEALLVFNPMSQDLSAT
                     EAQLVAFLQGLRDDGFQPTILRSGDVYGYSSCTASPPSQTKLQARTINPPATSLPARA
                     PQTAKSVPTGQTTLLPVPLSGRLAKGSTPALAKHTTTNLLLSSLKQSNASNTSGTTVG
                     FPAHLYPGVYPAMQLSVVLEALVPLKTPCLDVKHRAQSLQLSLAKSSLKLRKGSGNPQ
                     SKAPRRITSKGLKYLTSKGPGAGLRRGAGTQSNGARMKGRSTLGTKTVRGKAPRTLTK
                     AVCARASVAPAKTKTVRVRAKVKQAKPKAAKAKAKAAALRGKAKDKAVQAKAKAARTK
                     HKKRPKGYVQTRTGRTSLKNSSETVGQKRKKAEETKGLPPKKRARCVPRSKARLGTGT
                     AKPQKSQTIKVDRKCSDDEVRQCAQQILRVNLSPVVLLQPLLPV"
ORIGIN      
        1 cggaggcggc gcagaggtgc gtcctgggtc cccgcggcgg cgccggtacc aagtgctggt
       61 ttgtggatgc ccaggcagat ctgcagtgcc caatgccatg agcatggtag tgcagcatgt
      121 ggaggagaaa gctgtgcatt cgtggtcacg catctccaca gcagggaaga aagccctgga
      181 agaggccctc cttgtgttta atcccatgag ccaggatctc agtgccacag aggcccagct
      241 tgtggccttc ctccagggtc ttcgagatga tggcttccaa ccgaccattc ttcgaagtgg
      301 ggatgtctat ggttatagtt catgtacagc cagccccccc agccagacaa agctacaagc
      361 tcgtaccatc aacccacctg ccacgtcact tcctgccagg gctccccaaa ctgctaagtc
      421 agtccctaca ggccagacca ccttgctccc tgtgccactg tctggcaggc tggctaaagg
      481 gtccacacca gcccttgcca agcacactac cactaacctg ctgctgagct ccctgaagca
      541 gtcaaatgcc agcaacacca gtggtacaac agtaggcttc cctgcccacc tctatccagg
      601 cgtctacccc gccatgcagc tctctgtggt ccttgaagca ctagtcccac tcaagactcc
      661 ctgcttggat gttaagcata gggcacagtc attgcagctg tcacttgcaa aatcttccct
      721 aaaactgagg aaaggttcag ggaacccaca gtccaaagca cccagaagaa tcacaagcaa
      781 gggcctcaag tatctgacta gcaaaggccc tggggctggt ctccgacgag gtgctggaac
      841 ccagagcaat ggcgcccgaa tgaaagggcg ctctaccttg ggcaccaaaa cagtccgggg
      901 caaggcacct cgaaccctga ccaaagctgt ttgtgctcgt gccagtgtgg ctccagccaa
      961 gaccaagaca gtaagggtca gggccaaagt aaagcaggcc aagcccaagg cagccaaagc
     1021 caaagccaag gccgctgcgc tgaggggcaa ggccaaagac aaggcagtcc aggccaaggc
     1081 caaagcagct cggaccaagc acaagaaaag gccaaaggga tatgttcaga ccagaactgg
     1141 aagaacaagc ctgaaaaata gctctgagac tgtggggcag aagaggaaga aggctgagga
     1201 gaccaaaggt cttcctccta agaagagagc acggtgtgta ccccgatcta aggcacggct
     1261 gggaactgga acagctaaac ctcagaagtc ccagaccata aaggtagaca ggaagtgctc
     1321 agacgatgag gttcgacagt gtgcccaaca gatcctccgt gtgaatctct ctcctgtagt
     1381 attgctccag ccattgctgc cagtttgatt ccatactccc cgtcctgggt ccttgccaca
     1441 gtacttggga gaagagttga gctgtccttg tggccagcag cagtgtgcag tgctcacaac
     1501 tgcagcttcc tggactctgg gaacccccgg gacccctgtg gtcaccaaca tcctttcaga
     1561 cactgagggt ttgggtgggg tgggttgtgg gaggggtgtt ctcatggctc aatgcactgt
     1621 gacttgttct tcaaattgta aaaaaaaaaa aaaaaaaaaa aaaaaaaa
//
