LOCUS       NM_001420932            1870 bp    mRNA    linear   ROD 09-APR-2024
DEFINITION  Rattus norvegicus coiled-coil domain containing 70 (Ccdc70), mRNA.
ACCESSION   NM_001420932
VERSION     NM_001420932.1
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
REFERENCE   1  (bases 1 to 1870)
  AUTHORS   Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
            Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
            Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
            Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
            Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
            Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
            Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
            Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
            Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
            McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
            Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
            Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
            Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
            Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
            Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
            Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
            Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
            Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
  CONSRTM   Mammalian Gene Collection Program Team
  TITLE     Generation and initial analysis of more than 15,000 full-length
            human and mouse cDNA sequences
  JOURNAL   Proc Natl Acad Sci U S A 99 (26), 16899-16903 (2002)
   PUBMED   12477932
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            JAXUCZ010000016.1.
            
            ##Evidence-Data-START##
            Transcript exon combination :: BC169046.1, SRR26643293.75779.1
                                           [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMEA5760383, SAMEA5760386
                                           [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on conservation, expression,
                                      longest protein
            ##RefSeq-Attributes-END##
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-142               JAXUCZ010000016.1  76743810-76743951   c
            143-1870            JAXUCZ010000016.1  76739795-76741522   c
FEATURES             Location/Qualifiers
     source          1..1870
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN"
                     /db_xref="taxon:10116"
                     /chromosome="16"
                     /map="16q12.5"
     gene            1..1870
                     /gene="Ccdc70"
                     /gene_synonym="RGD1559811"
                     /note="coiled-coil domain containing 70"
                     /db_xref="GeneID:498657"
                     /db_xref="RGD:1559811"
     exon            1..142
                     /gene="Ccdc70"
                     /gene_synonym="RGD1559811"
                     /inference="alignment:Splign:2.1.0"
     exon            143..1870
                     /gene="Ccdc70"
                     /gene_synonym="RGD1559811"
                     /inference="alignment:Splign:2.1.0"
     CDS             221..892
                     /gene="Ccdc70"
                     /gene_synonym="RGD1559811"
                     /codon_start=1
                     /product="coiled-coil domain-containing protein 70"
                     /protein_id="NP_001407861.1"
                     /db_xref="GeneID:498657"
                     /db_xref="RGD:1559811"
                     /translation="MFPFKVSKWMGLACLRSLVLPSPSIRQKKLIHKLQEEKAFREEM
                     KIFHEKIEDFREEIWEFRGKIRAFRGQILGFWEEERPFWEEEKIFWKEEKTFWEMEKS
                     FREEEKTFWKKYRTFWKEDKAFWREDNALWERDRNLLQEDKALWEEEKALWVEERALL
                     AEEKALWEDKKSLWEEENALWEEEKALWVEGGGFHLLGEQRPQNGPYNVNEESQSTPF
                     PRGRA"
ORIGIN      
        1 acacttttta ctatctgccg ggctacagag acagcaggaa aatatatcca cacataatgt
       61 caagtatatc atgtaatggt aggacactgg cagataaaca cggagaagaa gaaaggaaca
      121 agaattgaag cccgcccaga agggtttggc caactgacct ggacgtggcc aacagccctg
      181 acctccaaca cagccatcca ccattccagc tgattgggag atgtttccct tcaaggtgag
      241 caaatggatg gggctggcct gcctccgttc actggtactg ccctcaccca gtatccgtca
      301 gaagaaatta atacacaagc tacaggagga aaaggctttt cgagaagaga tgaaaatttt
      361 ccatgagaaa atagaagact tcagggaaga gatctgggag ttccgaggca agatccgggc
      421 tttccggggc cagattctgg gtttttggga agaagagaga cctttctggg aagaagagaa
      481 gatcttctgg aaggaagaaa aaaccttctg ggaaatggaa aaatctttcc gggaagaaga
      541 gaagactttc tggaaaaaat acagaacttt ctggaaggag gacaaagcat tctggagaga
      601 ggacaatgct ttatgggaaa gagaccggaa tctccttcag gaggacaagg ccctatggga
      661 ggaggaaaaa gccttgtggg tagaggaaag agccctgctt gcagaagaga aggctctgtg
      721 ggaagataag aagtccctct gggaggaaga gaatgccctc tgggaggaag agaaagccct
      781 ctgggtggaa ggtggtggct tccatctcct tggggagcag aggccccaga acggtcccta
      841 caatgtcaat gaagagtcac agtcaacccc cttcccccga ggccgtgctt agtgaacgct
      901 ggacagagag ggccatgggt gcagacatca ctggttggga ttgaagtcca gggtgacccc
      961 catgtactag aagaaataga cattaatttg tctctttgcc atgaaagaga taataaagtc
     1021 ttgaagaggt ttgaaaaaca gctcttcaag gaaggttggc ttcattctcc ctgccatgtc
     1081 atctgattct gtgattcttg tacctaatcc tccagattgt cactggccac tggggctggc
     1141 aacagatagt ttctcattgt cctttgtgta ggggtttgta gggttgtata aaatagactc
     1201 aatgtcagac ccagacatac agggaggagc tgagacatcc tgccttttcc accctgtgac
     1261 ggtgaccact ttggctagtc tgggaggcct gagttgggct tcttctataa gtctgtcaaa
     1321 ctcctggaag taagagaaag gggctttaac aatggccaga ggcccaagaa cattctttac
     1381 aagcactaac cttttctaag agtggagaca aaagtagact ggtgggatga tccaggagtt
     1441 atgacagtct tgtctctgta tccttgcact caaatagctt tcactgtatg tgactctggg
     1501 ttttcagttc cttagccctg tcccactgac ttgtgtaagc tttcctacta ctctgggttg
     1561 acagagaaat cacagcatcc attgatgaga gaacagagac cccagaaagg caaagtgatt
     1621 acacgtggcc aggaaaagaa catatatact ctgccctagt atccagatct ttctctaatg
     1681 caacctggct catgggagtt ctcttcagag accatttacc ataataggta gtgagtctag
     1741 taagggagtc gggtcactgg aactgtgttc ttgaagagga cagtgtttaa cacaggcatc
     1801 aaagcaacag aacaagcagc catggatcaa gacctccaaa gctgtaggct caaataaact
     1861 ttccaatctg
//
