LOCUS       NM_001106229            2086 bp    mRNA    linear   ROD 03-APR-2024
DEFINITION  Rattus norvegicus coiled-coil domain containing 61 (Ccdc61), mRNA.
ACCESSION   NM_001106229 XR_009008
VERSION     NM_001106229.1
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
REFERENCE   1  (bases 1 to 2086)
  AUTHORS   Jakobsen,L., Vanselow,K., Skogs,M., Toyoda,Y., Lundberg,E.,
            Poser,I., Falkenby,L.G., Bennetzen,M., Westendorf,J., Nigg,E.A.,
            Uhlen,M., Hyman,A.A. and Andersen,J.S.
  TITLE     Novel asymmetrically localizing components of human centrosomes
            identified by complementary proteomics methods
  JOURNAL   EMBO J 30 (8), 1520-1535 (2011)
   PUBMED   21399614
COMMENT     PROVISIONAL REFSEQ: This record has not yet been subject to final
            NCBI review. The reference sequence was derived from CH473979.2.
            
            On Oct 4, 2007 this sequence version replaced XR_009008.1.
            
            ##Evidence-Data-START##
            Transcript exon combination :: BC127532.1 [ECO:0000332]
            RNAseq introns              :: mixed sample support SAMD00132261,
                                           SAMD00132262 [ECO:0006172]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on conservation, expression,
                                      longest protein
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..2086
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /db_xref="taxon:10116"
                     /chromosome="1"
                     /map="1q21"
     gene            1..2086
                     /gene="Ccdc61"
                     /gene_synonym="RGD1307390"
                     /note="coiled-coil domain containing 61"
                     /db_xref="GeneID:292680"
                     /db_xref="RGD:1307390"
     exon            1..332
                     /gene="Ccdc61"
                     /gene_synonym="RGD1307390"
                     /inference="alignment:Splign:2.1.0"
     exon            333..491
                     /gene="Ccdc61"
                     /gene_synonym="RGD1307390"
                     /inference="alignment:Splign:2.1.0"
     CDS             344..1882
                     /gene="Ccdc61"
                     /gene_synonym="RGD1307390"
                     /note="coiled-coil domain-containing protein 61; VFL3
                     homolog"
                     /codon_start=1
                     /product="centrosomal protein CCDC61"
                     /protein_id="NP_001099699.1"
                     /db_xref="GeneID:292680"
                     /db_xref="RGD:1307390"
                     /translation="MEQPAGLQVDYMFRGVEHAVRVVVSGQVLELEVEDRMTADQWRG
                     EFDANFIEDLTHKTGNFKQFSIFCNMLESALTQSSESVTLDLLTYTDLESLRSRKLGG
                     RPGPCPRSAQLNSKRYLILIYSVEFDRIHYPLPLPYQGKPDPVVLQGIIRSLKEELGH
                     LRGMNGGQDARETEIWHLREQVTRLASEKRELEAQLGRSREEALAGRAARQEAESLRG
                     LVRGLELELRQERGLGGRAAGRRSQDCRRLAKELEEVKASERNLRARLKTLNCELAMY
                     RRGRRTLPAGAREDRALSSRERSTSRGRTATRSSSRESNRGARSHGRPAHPSPSPTGS
                     RVPRFDPTAFVKAKEKKQREIRMKRQQQQQQQRNRMGSGGSGDGPSVSWSHQTRPPAA
                     VTGRGDAANRSRNRSSSVDSFRSRCSSVSSCSELEDFSQSVSKSRRCRGRGKPPSPIP
                     WSGSKTKSTTRERNNHQRHLASSGAWVPIKEYSSDYQGADMAEIDARLKALQEYMNRL
                     DTRS"
     exon            492..574
                     /gene="Ccdc61"
                     /gene_synonym="RGD1307390"
                     /inference="alignment:Splign:2.1.0"
     exon            575..729
                     /gene="Ccdc61"
                     /gene_synonym="RGD1307390"
                     /inference="alignment:Splign:2.1.0"
     exon            730..885
                     /gene="Ccdc61"
                     /gene_synonym="RGD1307390"
                     /inference="alignment:Splign:2.1.0"
     exon            886..1096
                     /gene="Ccdc61"
                     /gene_synonym="RGD1307390"
                     /inference="alignment:Splign:2.1.0"
     exon            1097..1179
                     /gene="Ccdc61"
                     /gene_synonym="RGD1307390"
                     /inference="alignment:Splign:2.1.0"
     exon            1180..1340
                     /gene="Ccdc61"
                     /gene_synonym="RGD1307390"
                     /inference="alignment:Splign:2.1.0"
     exon            1341..1416
                     /gene="Ccdc61"
                     /gene_synonym="RGD1307390"
                     /inference="alignment:Splign:2.1.0"
     exon            1417..1571
                     /gene="Ccdc61"
                     /gene_synonym="RGD1307390"
                     /inference="alignment:Splign:2.1.0"
     exon            1572..1650
                     /gene="Ccdc61"
                     /gene_synonym="RGD1307390"
                     /inference="alignment:Splign:2.1.0"
     exon            1651..1711
                     /gene="Ccdc61"
                     /gene_synonym="RGD1307390"
                     /inference="alignment:Splign:2.1.0"
     exon            1712..1784
                     /gene="Ccdc61"
                     /gene_synonym="RGD1307390"
                     /inference="alignment:Splign:2.1.0"
     exon            1785..2086
                     /gene="Ccdc61"
                     /gene_synonym="RGD1307390"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 atggaaacat gactgcctgt aaggccctac caatcagaag tgagaagccc ggatgtgggc
       61 ggaactgaaa cttcggcggt tgaaccggtg gtgaagaggg cgtctgtggc ggtgaccagc
      121 gagtacgcgg ctgcgggcgc gggctccagg cgcgggctcc aggcgcgggg attggggagt
      181 ccccggagca caggtccttt cacgcaggtg gacgccagaa cctatgcaag ctggagattt
      241 cacagagtct ttattgcgct atgttgtcgc tcccgatata cgcggctaga acttagaggt
      301 cccttaccga atactgcact agagcttgtg agggaccctg gccatggagc agccagctgg
      361 cctgcaggtg gactacatgt tccggggtgt ggagcatgct gtgcgggtgg tggtttctgg
      421 gcaggtgctg gagctggagg tggaggaccg gatgacagct gaccagtggc gtggagagtt
      481 tgatgccaac ttcattgaag acttgactca taagaccggg aactttaaac agttcagcat
      541 cttctgtaac atgctggagt cagccctcac ccagagtagt gagtctgtca ctctggacct
      601 gctcacctac acagacctgg agtctctgcg cagtcgcaag ctggggggcc gcccgggtcc
      661 ctgccccagg tcggcccagc tcaactccaa acgctacctc atcctcatct attccgtgga
      721 gtttgacagg attcactacc cgctgcccct cccgtaccag ggcaagcctg accccgtggt
      781 tctgcagggc atcatccgct cactgaagga ggagttgggt caccttcgag ggatgaatgg
      841 cggccaggat gctcgggaga cagagatctg gcatctgagg gagcaggtga cccgcttggc
      901 gtcagagaag cgggagctgg aggcgcagct gggccgctcc cgagaggagg ctctggcggg
      961 tcgggcagct cgccaggaag ccgagtcgct gcgggggctg gtgaggggcc tagagctgga
     1021 gttacggcaa gagcgtggcc ttgggggtcg ggctgctggc cgccgcagcc aggattgtcg
     1081 cagactagct aaggagctcg aggaggtaaa ggcgtcagag cgcaatctgc gtgctaggct
     1141 caagactctg aattgcgagc tggctatgta ccgaaggggg agacgcacgt tgccggctgg
     1201 agccagggag gaccgagctt tatcatctcg ggagcgctcc acgtctcgtg gtcgcacggc
     1261 cactcgctcc tcatcgcggg agagcaaccg cggagcccgg agtcacggcc ggccagcaca
     1321 cccctcaccc tcacctacag gtagtcgtgt gccccgtttt gaccccacag ccttcgtgaa
     1381 agccaaagag aagaagcaga gagagatcag gatgaagcgg cagcagcagc agcagcagca
     1441 gcggaaccga atgggcagtg gaggaagcgg ggacggtcca tctgtctcat ggtctcacca
     1501 gactcggccc cctgctgctg tgaccggccg aggggatgca gctaaccgct cccggaaccg
     1561 cagctcctcc gtggacagtt tccgcagccg ctgctcgtca gtcagctcct gcagtgagct
     1621 agaggatttc tcccagtcag tttccaaaag tcgtcgttgc cgtggacgcg ggaaaccacc
     1681 cagccccata ccctggagtg ggtccaagac gaagtctacc actcgagaac gcaacaatca
     1741 ccagagacac ttggccagct ctggggcctg ggtccccatc aaagagtaca gctccgacta
     1801 ccagggagcc gacatggctg aaatagatgc ccgcctgaag gctttgcagg aatacatgaa
     1861 ccggctggac acacggtcat gaccctggag aggtggtacc ctgatttccc attctgccat
     1921 ccgggggtct ggtgtggagg cagtgcccct cccacgttcc acatctcctg gtgctccagg
     1981 ggtctcaggt gtgtcaggcc cgactcctcc ccctccccct cccagtaatg cattctagga
     2041 gaagagggta tgtgtatttt gtaaataaat atggttgttt ttggga
//
