LOCUS       NM_001398860            1221 bp    mRNA    linear   ROD 31-MAR-2024
DEFINITION  Rattus norvegicus coiled-coil domain containing 54 (Ccdc54), mRNA.
ACCESSION   NM_001398860 XM_573274
VERSION     NM_001398860.1
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            JAXUCZ010000011.1.
            
            On Dec 27, 2021 this sequence version replaced XM_573274.6.
            
            ##Evidence-Data-START##
            Transcript exon combination :: MT038367.1, SRR26360181.1568746.1
                                           [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMEA5760383, SAMEA5760389
                                           [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on single protein-coding transcript
            ##RefSeq-Attributes-END##
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-33                JAXUCZ010000011.1  63693017-63693049
            34-1221             JAXUCZ010000011.1  63694927-63696114
FEATURES             Location/Qualifiers
     source          1..1221
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN"
                     /db_xref="taxon:10116"
                     /chromosome="11"
                     /map="11q21"
     gene            1..1221
                     /gene="Ccdc54"
                     /gene_synonym="RGD1559779"
                     /note="coiled-coil domain containing 54"
                     /db_xref="GeneID:498073"
                     /db_xref="RGD:1559779"
     exon            1..33
                     /gene="Ccdc54"
                     /gene_synonym="RGD1559779"
                     /inference="alignment:Splign:2.1.0"
     exon            34..1221
                     /gene="Ccdc54"
                     /gene_synonym="RGD1559779"
                     /inference="alignment:Splign:2.1.0"
     CDS             178..1170
                     /gene="Ccdc54"
                     /gene_synonym="RGD1559779"
                     /codon_start=1
                     /product="coiled-coil domain-containing protein 54"
                     /protein_id="NP_001385789.1"
                     /db_xref="GeneID:498073"
                     /db_xref="RGD:1559779"
                     /translation="MYRFHTKRVRVAAGQVWTSNLHKIRRSLKNVYQKCKSRHSYSTN
                     YPTTASYDCDQDTLSLNEEMSLTFMLQDIKTGQMELLSQMTDIVSAISNIQDKVNHYQ
                     NQMEALETRINISEDRQATSNKDILSMKEDINTLKKKMTDLENQNSYSSVHCLEVLEG
                     EKGKEIAQLLQKLLQPETTKDTATSSDTVISSAEPEGAPSYPEPTDELKKNTMSSQPI
                     ITLKKTNSLQNASMGCKHVRPNIYIYPDFSTWIKLTFVHGGSWRFFLNATKLEEFIQW
                     LLSRPMILPEEPQIIPQRDYAFIGPIERLATVCLSLFNYVYCLFGSSKEEITRL"
ORIGIN      
        1 gaaggggctt ggggcattgc tctacgtgac ttggttctcc acagggtatt taatgatgtg
       61 acaaagaaag aactccagca aataagaaga gaaaagccac acctgcataa aaatcgcttc
      121 tttccatgat tccagtcatg tgtctcagca cttcgggtct tatgtctcag taaaaacatg
      181 tacagatttc acaccaaaag agtaagagtt gccgctgggc aggtgtggac ttcaaatctc
      241 cacaagatca gacgatcgct taaaaatgtt taccagaaat gtaagtcccg gcactcatat
      301 tcaaccaact acccaacaac ggcttcttac gattgtgacc aagatactct cagtttgaat
      361 gaagaaatga gtctaacatt tatgctccaa gacattaaaa cgggacaaat ggaactcctc
      421 agccaaatga ctgacattgt cagtgcaata tcaaatatcc aggacaaggt caaccattat
      481 cagaatcaga tggaagccct agaaaccaga ataaacatca gcgaagacag acaagctaca
      541 agcaacaaag acatcctctc catgaaagaa gatatcaaca ctctaaagaa gaagatgaca
      601 gacctggaaa accagaattc ttactccagc gtacactgtc tagaggtctt ggagggagaa
      661 aaaggtaaag aaattgcaca gctcctccaa aagctcttac aacctgaaac cacgaaggat
      721 acggccacct cttcagacac cgtcatctct tcagcagagc cagagggagc gcccagttac
      781 ccagagccca ctgatgagct taagaaaaac acaatgtcgt ctcagcctat aataacgctg
      841 aagaaaacga atagcctcca aaatgcatca atgggttgca aacacgtaag gccaaatatt
      901 tatatttacc ctgacttcag tacatggatc aagctcactt ttgttcatgg aggaagttgg
      961 agatttttcc ttaatgccac caagttagag gaattcatcc agtggcttct gtctaggcca
     1021 atgatccttc ctgaggaacc acaaatcata ccccagagag actatgcctt cattggaccc
     1081 attgagaggt tggccacagt ttgcctctct cttttcaact atgtttattg cctttttggt
     1141 tcctcaaaag aggaaataac tcgactttag agttatttcc tgcttggctt ggtacaaaat
     1201 aaatgtagcc tgtttcaagt a
//
