LOCUS       NM_001191063            1959 bp    mRNA    linear   ROD 28-MAR-2024
DEFINITION  Rattus norvegicus coiled-coil domain containing 27 (Ccdc27), mRNA.
ACCESSION   NM_001191063 XM_001053589
VERSION     NM_001191063.1
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
COMMENT     INFERRED REFSEQ: This record is predicted by genome sequence
            analysis and is not yet supported by experimental evidence. The
            reference sequence was derived from JAXUCZ010000005.1.
            
            On Jul 17, 2010 this sequence version replaced XM_001053589.1.
            
            Sequence Note: The RefSeq transcript and protein were derived from
            genomic sequence to make the sequence consistent with the reference
            genome assembly. The genomic coordinates used for the transcript
            record were based on alignments.
            
            ##Evidence-Data-START##
            Transcript exon combination :: SRR26643293.31848.1,
                                           SRR26360181.2440296.1 [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMEA5760383 [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on conservation, expression,
                                      longest protein
            ##RefSeq-Attributes-END##
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-186               JAXUCZ010000005.1  169881504-169881689 c
            187-313             JAXUCZ010000005.1  169880763-169880889 c
            314-415             JAXUCZ010000005.1  169880043-169880144 c
            416-570             JAXUCZ010000005.1  169878867-169879021 c
            571-750             JAXUCZ010000005.1  169876732-169876911 c
            751-843             JAXUCZ010000005.1  169876024-169876116 c
            844-1216            JAXUCZ010000005.1  169875399-169875771 c
            1217-1347           JAXUCZ010000005.1  169875107-169875237 c
            1348-1425           JAXUCZ010000005.1  169872515-169872592 c
            1426-1638           JAXUCZ010000005.1  169872046-169872258 c
            1639-1743           JAXUCZ010000005.1  169868961-169869065 c
            1744-1959           JAXUCZ010000005.1  169867709-169867924 c
FEATURES             Location/Qualifiers
     source          1..1959
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN"
                     /db_xref="taxon:10116"
                     /chromosome="5"
                     /map="5q36"
     gene            1..1959
                     /gene="Ccdc27"
                     /note="coiled-coil domain containing 27"
                     /db_xref="GeneID:679584"
                     /db_xref="RGD:1587099"
     CDS             1..1866
                     /gene="Ccdc27"
                     /codon_start=1
                     /product="coiled-coil domain-containing protein 27"
                     /protein_id="NP_001177992.1"
                     /db_xref="GeneID:679584"
                     /db_xref="RGD:1587099"
                     /translation="MKQESLPQECSSTSPKINKGLMALQSIASRSWGVKNSEKKPQNT
                     PQSLSKSTQAVGCFYCKEDQIKKFSKHNGFVSEMEDMRRAFLMRPGCPQFSTRTTSVS
                     HVGSATMVDLPSPSSGVWKMSEDHPLCRLGSATSVDGKFFPSSRSACELNYPRKRSEP
                     SVTSPIGSPTMVKKSQRTRMPWYISVIHEKDHSLLLMGEELQRFSEMETQMQKKDQEI
                     LMLQKEKEALRKQLRSLLRSKATEPSSAFIRMERSFETPLKLGRMSMLKTIYKEEDEL
                     QRWIQMQEEAESNKEPGSTIEEKSSEGQPEEAAPTKQRTSHSKTGTLLEVSPEEEEEE
                     TKGTEEDESTVDEEEGLWELREEEERRPKKSYSMTESFEEELMAQLEEYERMLMDFQN
                     ELELTRSKYSLATGAITSLQRHTDFQESQLRKVTTENELLVKELRERKQQIQDMTDKF
                     SNLREEKKHQEIMGLIEKENLTLRQKVADLKTELENSEHTIEELNAQTKELENLVNTD
                     KDHLRRWKELNDDLQMRNEMIQQAEQQTHVILEATQARLEKLRNKIIQAVFSVSGTKS
                     LSTEISDNYILESLQRIISERSDFYNQLKQKGVKVPPLQQSDVSLPGKIKKMLSK"
     exon            1..186
                     /gene="Ccdc27"
                     /inference="alignment:Splign:2.1.0"
     exon            187..313
                     /gene="Ccdc27"
                     /inference="alignment:Splign:2.1.0"
     exon            314..415
                     /gene="Ccdc27"
                     /inference="alignment:Splign:2.1.0"
     exon            416..570
                     /gene="Ccdc27"
                     /inference="alignment:Splign:2.1.0"
     exon            571..750
                     /gene="Ccdc27"
                     /inference="alignment:Splign:2.1.0"
     exon            751..843
                     /gene="Ccdc27"
                     /inference="alignment:Splign:2.1.0"
     exon            844..1216
                     /gene="Ccdc27"
                     /inference="alignment:Splign:2.1.0"
     exon            1217..1347
                     /gene="Ccdc27"
                     /inference="alignment:Splign:2.1.0"
     exon            1348..1425
                     /gene="Ccdc27"
                     /inference="alignment:Splign:2.1.0"
     exon            1426..1638
                     /gene="Ccdc27"
                     /inference="alignment:Splign:2.1.0"
     exon            1639..1743
                     /gene="Ccdc27"
                     /inference="alignment:Splign:2.1.0"
     exon            1744..1959
                     /gene="Ccdc27"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 atgaagcagg agagcttacc tcaggaatgc agctcaacct ccccaaagat caacaagggc
       61 ctgatggcgc tccagagcat agccagccgg agctggggcg taaagaactc agagaagaaa
      121 ccacagaata cccctcaaag cctcagcaaa tcaacccagg ctgttggatg tttctactgc
      181 aaagaggacc agatcaagaa gttctccaaa cataatggct ttgtgtccga aatggaggac
      241 atgagaaggg ccttcctcat gcggcctgga tgtccccagt tcagtaccag gactacgtcc
      301 gtgtctcatg tgggttctgc caccatggtt gatcttccct ctcccagctc tggagtttgg
      361 aagatgagtg aggaccaccc cctatgcagg ctgggctccg ccaccagtgt ggatgggaag
      421 ttctttccat ccagcaggag tgcttgtgag ctcaactacc cacggaagag gagcgagccc
      481 tcagttacga gtcccatcgg cagccccacc atggtcaaga agtcccagag gacgagaatg
      541 ccttggtaca tctcagtcat ccatgagaag gatcactctc tgctcctgat gggagaggag
      601 ctgcagcgtt tctcagagat ggagacccag atgcagaaga aagatcagga gatcctgatg
      661 ctccagaagg agaaggaggc tctgaggaag cagctgagaa gcctcctcag aagcaaagcc
      721 acagaaccct cttcggcttt catcaggatg gaacggtcct tcgagacgcc cttgaaattg
      781 gggcggatga gcatgctgaa gaccatatac aaagaggagg atgaactaca gcgttggata
      841 caaatgcagg aggaggcaga aagcaacaag gagccaggga gcaccataga ggaaaagagc
      901 tccgaggggc agcccgagga ggctgcaccc accaagcaga ggaccagcca cagcaagaca
      961 gggactctgc tggaggtgag ccctgaggag gaggaagagg aaacaaaagg aactgaggag
     1021 gatgagtcaa cagtagacga ggaagaggga ttgtgggagc tgagggagga ggaggagcgt
     1081 cgccccaaga agtcctactc catgacggag tccttcgagg aggagctgat ggcccagctg
     1141 gaggagtatg agcgcatgtt gatggacttc cagaatgagc tggaattaac taggtccaaa
     1201 tattccctgg ccacaggggc catcacatct ctacagcggc acactgactt ccaagagtct
     1261 cagctgcgaa aggtcaccac ggagaatgag ctcctggtga aggaactccg ggaacggaag
     1321 cagcagatac aagacatgac cgacaagttc tccaacctcc gggaggaaaa gaagcatcag
     1381 gaaataatgg ggctcattga aaaggaaaac ctgaccctcc gacagaaagt agcagacttg
     1441 aagacagagc tggagaacag tgagcacacc atcgaggagc tgaacgccca aaccaaggag
     1501 ctggagaatc tggtcaacac agacaaggac cacctgaggc ggtggaagga gttgaacgat
     1561 gacctgcaga tgcggaatga gatgatccaa caggcagagc agcagactca tgtgatcctg
     1621 gaggccaccc aggccaggct cgagaagcta aggaataaga tcatacaggc tgtcttcagt
     1681 gtcagtggga ccaagagctt gtccaccgaa atctctgata actacatcct ggaatctctg
     1741 cagaggatca tctcggagag aagtgacttc tacaatcagc tgaagcagaa gggcgtgaag
     1801 gtgcccccgc tacaacagtc agatgtctcc ctgcccggca agatcaagaa gatgctgtcc
     1861 aagtgatacg gcacacccag cggaggccag ggccctgctg gcaaagccag cctgtgtggt
     1921 tagttctgtg atagagaatt aaacgttaga gttgccacc
//
