LOCUS       NM_001134630             690 bp    mRNA    linear   ROD 27-OCT-2024
DEFINITION  Rattus norvegicus coiled-coil domain containing 196 (Ccdc196),
            transcript variant 1, mRNA.
ACCESSION   NM_001134630 XM_001080862 XM_576055
VERSION     NM_001134630.1
KEYWORDS    RefSeq.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
COMMENT     PROVISIONAL REFSEQ: This record has not yet been subject to final
            NCBI review. The reference sequence was derived from CH473947.1.
            
            On or before Sep 4, 2008 this sequence version replaced
            XM_576055.2, XM_001080862.1.
            
            ##Evidence-Data-START##
            RNAseq introns :: partial sample support SAMEA5760383, SAMEA5760389
                              [ECO:0000350]
            ##Evidence-Data-END##
FEATURES             Location/Qualifiers
     source          1..690
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /db_xref="taxon:10116"
                     /chromosome="6"
                     /map="6q24"
     gene            1..690
                     /gene="Ccdc196"
                     /gene_synonym="RGD1562540"
                     /note="coiled-coil domain containing 196"
                     /db_xref="GeneID:500678"
                     /db_xref="RGD:1562540"
     exon            1..121
                     /gene="Ccdc196"
                     /gene_synonym="RGD1562540"
                     /inference="alignment:Splign:2.1.0"
     CDS             75..602
                     /gene="Ccdc196"
                     /gene_synonym="RGD1562540"
                     /note="isoform 1 is encoded by transcript variant 1;
                     putative coiled-coil domain-containing protein 196"
                     /codon_start=1
                     /product="putative coiled-coil domain-containing protein
                     196 isoform 1"
                     /protein_id="NP_001128102.1"
                     /db_xref="GeneID:500678"
                     /db_xref="RGD:1562540"
                     /translation="MTSGSNSSESGLSSKRNPKTYDNYLKELNEDLKLRKQELLEMLK
                     PLEDKNNLLLQKLMANLEEKQRSLQIMRQIMAGRGGDESSVEELIKEAQEMKQNLEKQ
                     QRKIKWVKYEEQPNILQGFHDKVIEVKIEALRNYEKTNDFELSLYLQHDFETKQEALK
                     LLRPQEALFSEVNAR"
     exon            122..274
                     /gene="Ccdc196"
                     /gene_synonym="RGD1562540"
                     /inference="alignment:Splign:2.1.0"
     exon            275..371
                     /gene="Ccdc196"
                     /gene_synonym="RGD1562540"
                     /inference="alignment:Splign:2.1.0"
     exon            372..431
                     /gene="Ccdc196"
                     /gene_synonym="RGD1562540"
                     /inference="alignment:Splign:2.1.0"
     exon            432..570
                     /gene="Ccdc196"
                     /gene_synonym="RGD1562540"
                     /inference="alignment:Splign:2.1.0"
     exon            571..690
                     /gene="Ccdc196"
                     /gene_synonym="RGD1562540"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 tgtcttaact gcacagggaa aggaggcaca tagtttccag aaggcctctt tattgttagg
       61 cgtttccctt caagatgaca agtggctcaa actcttcaga atctggtttg tcctcaaaaa
      121 ggaatcctaa aacatatgac aactacttga aagaattgaa cgaggactta aagttaagga
      181 agcaggaact tctagagatg ctgaaacctc tggaagataa gaacaatctc ttattgcaga
      241 agttaatggc taacttggag gaaaagcaga ggagtctgca gatcatgagg cagatcatgg
      301 ccgggagggg aggtgatgaa tcttcagtcg aggagcttat taaggaagcc caggagatga
      361 agcagaacct ggaaaagcaa cagaggaaaa taaaatgggt caaatatgag gagcaaccca
      421 acatccttca gggctttcat gacaaagtga ttgaggtgaa aattgaagcc ctgaggaact
      481 acgagaagac caatgacttc gagttatccc tgtacctaca acacgatttt gagacaaagc
      541 aagaagcttt gaagcttctg aggcctcagg aggctctttt ttctgaagtc aatgccagat
      601 gaagctctga aggattagaa ggctttcact acatttgctt tggacagatg cgaagactag
      661 gtacggcctt tctgttcact aaaatctctc
//
