LOCUS       XM_039101450            9526 bp    mRNA    linear   ROD 11-JUN-2023
DEFINITION  PREDICTED: Rattus norvegicus coiled-coil domain containing 186
            (Ccdc186), transcript variant X2, mRNA.
ACCESSION   XM_039101450
VERSION     XM_039101450.1
DBLINK      BioProject: PRJNA677964
KEYWORDS    RefSeq.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_051336.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            [WARNING] On Feb 22, 2024 this sequence was replaced by
            XM_039101450.2.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_015227675.2-RS_2023_06
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.1
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 06/06/2023
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..9526
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN/NHsdMcwi"
                     /db_xref="taxon:10116"
                     /chromosome="1"
                     /sex="male"
                     /tissue_type="kidney"
                     /geo_loc_name="USA: Wisconsin, Milwaukee, Medical College
                     of Wisconsin"
                     /collection_date="2019-03-08"
                     /collected_by="Rebecca Schilling"
     gene            1..9526
                     /gene="Ccdc186"
                     /note="coiled-coil domain containing 186; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 1 mRNA, 13 ESTs, 1 long SRA read, 5 Proteins, and 100%
                     coverage of the annotated genomic feature by RNAseq
                     alignments, including 5 samples with support for all
                     annotated introns"
                     /db_xref="GeneID:361773"
                     /db_xref="RGD:1307158"
     CDS             180..2948
                     /gene="Ccdc186"
                     /codon_start=1
                     /product="coiled-coil domain-containing protein 186
                     isoform X1"
                     /protein_id="XP_038957378.1"
                     /db_xref="GeneID:361773"
                     /db_xref="RGD:1307158"
                     /translation="MKIRSRFEEMQSELVAVSMSETEHIASISSDATTGTTSELKDDS
                     RISVSGDESSRLETGSELLSLNPDRVLCQTTEQCSQNEVQEDDVQEGRTPDCGSAEHS
                     CAETDTCPEHSEQMDDCPGGNFAKPVSHTSEPGHMVTQRLAEFKSSAPTEAGDPKTTS
                     ASLYDTDCTRKLISKIKTVSASDDLLGEIESELLSAELAEEHQVPNGVNKGEHALALF
                     EKCVHSRYLQQELTIQQLIKENKNHQELILNICSEKDNLREELKKRTETEKLHMNTIK
                     QLELRIEELNKEVKASKDQLVAQDVTAKNAIQQIHKEMAQRMDQANKKCDEARQEKEA
                     MVMKYVRGEKEALDLRKEKETLERKLRDASKELEKNTNKIKQLSQEKGRLQQLYESKE
                     GETTRLARETEKLKEEMNSHIIKVKWAQNKLKAEVDSHKETKDKLKETTTKLTQAKEE
                     AEQIRQNCQDMIKTYQESEEIKSNELDAKLRVTKGELEKQMQEKSDQLEMHHAKIKEL
                     EDLKRTFKEGMDELRTLRTKTKCLEDERLRTEDELSKYREIINRQKAEIQNVWDKVKA
                     AQQLQEQLYSGKQEIEHLKEEMESLNSLINDLQKDIEGSRKRESELLLFTEKLTSKNA
                     QLQSEASSLQAQVDSLSCSESQLQSQCEHMKQTNGDLESRLLKEEELRKEEVQSLQAE
                     LSAVQTEARALSTQVEELKDELVTQRRKHASNVKDLSKQLQQARRKLDQTENGNYDKD
                     VSSMGSRSSSSGSLNARSSAEDRSPENTSSSVAVDNFPEVDKAMLIDRIVRLQKAHAR
                     KNEKIEFMEDHIKQLVEEIRKKTKIIQSYVLREESGTLSSEASDFNKVHLSRRGGIMA
                     SLYTSHPADSGLTLELSLEINRKLQAVLEDTLLKNITLKENLQTLGTEIERLIKHQHE
                     LEQRTKKA"
ORIGIN      
        1 ccgcgggggt tttaggggta aacctcggct gagagccagg aatcggctgt ggtctccgcg
       61 agtgacttcc tcacccactc cgcgtccgct agacgctgcc atggattcgc cggctccgga
      121 gccggagctt catcggcctc gctagggtgc ggcccgggac ggggcgacgg acgatgtaaa
      181 tgaagatcag gagcagattt gaagaaatgc aaagtgaatt ggtagcagtc agcatgtcag
      241 agacggaaca catagcctcc atttcttctg atgcaaccac tgggacaaca tccgagttga
      301 aggacgactc acgcatctca gtttctggtg atgaaagcag cagattagaa acgggatctg
      361 aactactgtc actgaaccct gacagagttt tatgtcagac tactgaacag tgtagtcaga
      421 atgaggtgca ggaggatgat gtgcaggaag gccgtactcc agactgtggc agtgctgagc
      481 attcatgtgc tgagacagac acatgcccag aacattctga gcaaatggat gactgtcctg
      541 gcggaaactt cgcaaaacca gtgtcccaca ccagtgagcc aggacacatg gtaacacaga
      601 gactggcaga gttcaagtca tctgcaccca cagaagctgg tgatccaaag accacctcag
      661 caagcctcta tgatacagac tgcaccagga aactcatttc aaagataaag actgtttcag
      721 catcggacga tttgttggga gaaatagaat ctgagctctt atctgctgag ttggcagagg
      781 agcaccaagt acccaatgga gtgaacaagg gcgagcacgc cttagccctg ttcgagaagt
      841 gcgtgcacag caggtacctg cagcaggagc tcactattca acagttaatt aaagaaaata
      901 agaatcatca ggaacttatc ttaaacattt gttcagaaaa agacaattta agagaagaac
      961 tgaaaaaaag gacagaaaca gagaagctac atatgaacac aattaaacag ttagaattaa
     1021 gaatagagga gctgaataaa gaagttaaag cttccaaaga tcagctggta gcacaggatg
     1081 ttacagctaa aaatgccatt cagcaaatcc ataaagagat ggcccagcgg atggaccagg
     1141 ccaataagaa atgtgacgag gcccgccagg aaaaggaggc gatggtaatg aagtatgtga
     1201 gaggcgagaa ggaggctcta gaccttcgaa aggaaaaaga aacccttgag aggaaactta
     1261 gagatgcaag taaggaattg gagaaaaaca ctaacaaaat taagcagctg tctcaggaga
     1321 aagggcggct gcagcaactc tatgaatcga aggaaggcga aacaaccaga ctcgccagag
     1381 aaactgagaa attaaaggag gagatgaact ctcacatcat taaagtaaag tgggcgcaaa
     1441 acaagttaaa agctgaagtg gactcacaca aggagaccaa agataaactc aaagaaacaa
     1501 ccacaaaact aacccaggcg aaggaagaag ctgagcagat ccggcagaac tgtcaggata
     1561 tgataaagac atatcaggaa tccgaagaaa ttaagtccaa tgagcttgat gcaaagctca
     1621 gagtcacaaa aggagaactt gaaaaacaaa tgcaagagaa atccgaccag ctggagatgc
     1681 atcatgccaa gataaaggag ctagaagatc tgaagaggac gtttaaggag ggcatggatg
     1741 agctacgcac actgagaaca aagacgaagt gtctggaaga tgaacgtcta agaaccgaag
     1801 atgagctgtc aaagtaccgg gaaatcatca accggcagaa agccgagatc cagaatgtat
     1861 gggacaaggt gaaggccgca cagcagttac aggaacagct ttacagtggt aaacaagaaa
     1921 ttgaacattt gaaggaagaa atggaaagcc ttaattcttt gattaacgac ctacaaaagg
     1981 acattgaagg cagcaggaaa agggagtctg agctcctgct tttcacagaa aagctcacta
     2041 gtaagaatgc acagctgcag tctgaggcca gctcgctgca ggcacaggtg gatagcctct
     2101 cctgcagcga aagtcagctg cagagccagt gcgaacacat gaagcagacc aatggtgacc
     2161 tggagagcag gttgctcaaa gaggaggaac ttcgaaaaga agaagtgcag agtctgcaag
     2221 ccgagctttc cgctgtgcag acggaagcca gagccttgag cacccaggtg gaagagctga
     2281 aagatgagtt agtaacacag aggcgcaagc acgcctctaa cgtcaaggac ctcagcaaac
     2341 agcttcagca agctcggaga aagttagacc agactgagaa tggaaactac gacaaagatg
     2401 tgagcagcat gggaagtcgt tccagttcat cagggtcact taatgctcga agcagtgctg
     2461 aagaccgatc tccagagaac accagctcct cggtggctgt ggacaacttc ccagaagtgg
     2521 acaaggccat gctgattgac aggatagtga ggctgcagaa agcgcatgcc cggaagaatg
     2581 agaagataga gttcatggag gaccacatca aacagctggt tgaagaaata agaaaaaaaa
     2641 ccaaaataat tcagagttac gttttacgag aagaatcagg cacactttct tcagaagcat
     2701 ctgattttaa caaagtgcat ttgagtagac gcggtggcat catggcgtcc ttgtacacat
     2761 cccatcccgc tgatagtggg ctaacactgg agctctcttt ggaaatcaac cgaaaattac
     2821 aggctgtttt ggaagataca ttgctaaaaa atattacttt gaaggaaaac ctgcaaacac
     2881 ttggaacaga aatagaacgc cttattaaac accagcatga actggagcag aggacgaaga
     2941 aggcctaaca caaagttctt gcctagtaga caaacaagcc acagagcatg gcactggtga
     3001 ctgaaaattg tcaaaggtga acaagacaag taattgagaa gacaagaact gagctacata
     3061 ccaaaatgtc tgttacctct tcactgggct cctgagatgc atgtgactgt ccttcatgac
     3121 tgccgttatc ttccctccca agtgcatagg tgtctgcggt gtatagggaa ccctgggtca
     3181 cactgtgctt tccgtagata ctgatactct gtgtaaagcg acgctgtccg gcgagtctgt
     3241 gtacattctg tacttattaa ataagcagtg cctctttacc aagtcgaatc tggatggcgt
     3301 ctgtagtggc cactctgcac tgcccgttag caagactctt ccacactgag tgtagtcttt
     3361 aaactgtagt ctttaaaata atcagtctgc ttccccatgt gtctttatca aaaccagcaa
     3421 acatgactgc cagatttgac ttggaactta aactacagat agtggagctg gacgttggtc
     3481 tcacagacta gaaagtgtct cactagggct ggaaaccttg tggtgcgatg ccttccgatg
     3541 tttcgtggct gcgaacctca agtccccaca gtctccagct tcgttaactg taaagaatcg
     3601 ctcgtgtgct agaatggggt tagtgtcccc aggtcaccat gcagccctag ttaacagcac
     3661 tgggttactt cgcatctcta aatctccctt cacttctact atgcccatca cataagccat
     3721 tgattcttgg gaaagttccc ctgaaattca cacctataaa gtgcaggtga tgacagcaaa
     3781 gggagcgtcc acgagtcctc atagttgcct gccaggaaac cgggggtagt gctcagatgt
     3841 gctgctcctg ctggccagcc atcaactgac tctggagccc ctgcgtatca tttcagtgta
     3901 gtttgtcttt agtaagtaat gaacacccta aggacaggaa atgtagcttt gttggctggt
     3961 cacctgcata ggataaaccc agtggccaag tcccatgttg ccctgagaat cctttctgtc
     4021 actcggttgc ccatgctaag caagcatttc tttggaattg gaactagctt gttcctcagt
     4081 ttggagtttg gtgtgaatat ggccagagtg aaggtttgaa tgggagaact ctgctaagag
     4141 ttactaaacg tcagcatctc taactgggac tcaagtcata cttgacagag cgagcactta
     4201 aggactaact gcagctattt aaaatagggt ttttaaaggc atgtcctcgc ctaaaaataa
     4261 cacctttcaa aaacacatgg ctaaatgcct tccaggtgcc acggcaagca aaaaggccga
     4321 agtccccgtg ccctctgaga gctggatgat ccagtttcaa aactgtagtg caaaaggcca
     4381 ttctccagtg tgtgctcatc ctaagagcct gcgtaactgc agagtgcacg tgctgcccgc
     4441 agctctgaac agcctacctc agttagacac gactcctgct tcagaacact tagatacagc
     4501 cagaaaaaca cacttgactc ttctctcccc ggtccctcaa cagaggtacg cccaaagcag
     4561 aagctgcaac catctatcca gtgcctgcct tctccatttt cttcctcctg tttaaatagg
     4621 cttttactta ccatgtcagt caaatgagaa aagggaaagg gaaaaggacc tttaaagtcc
     4681 ttttcacgct ccttgtaacc gtttcctcag tattatgact tgaagcaaac actaccaaga
     4741 ctccagtgtt gaattcaggc ttggtggatc cagccactga cagccacagg atcctgaaga
     4801 atttgaccta gtcagtggct cgatacgtta gtgggcttgt aatttaatag catcgtgatg
     4861 tggtgagacg gagtaagaac tggccggaag caggccactc cctgctccag gccccatagc
     4921 aatgaaggca gctcattctg ggctgaggcc ttgggaacag ctaaaataag tcttcaaact
     4981 gcacaataaa atactaacca acatggacgg atttgagctt ccatgggagt gcttccattc
     5041 agatcccggg ggctgcacgc agctagaaga aagactagcg gccttgaact cataggactc
     5101 tcaggaaaag tgaaggggga gactcatggg tagtgataag tatcctggtg gctgagcagt
     5161 tccctgtatc tgttttgaaa acaggattgt agatctgtct cttccaaggg cgtggctgct
     5221 tggggaggaa agagaatgtt tgaatggttg ctctggttct cttagtctgt tatgtaattt
     5281 aaaggtgaca ctagcagtac tggtatttga attgtgggac ttgcacaggc aagctgccac
     5341 accacaaaac tgtattcctg gccctctttg tccttacctg agtctcaccg agctgcctaa
     5401 gctgactttg aatcaaccta cagtcccagg agccttgaac tcactgccca gcctactcta
     5461 ccagggcttg acctaaggtt gcccatagga aaagttcttt aaagccacat taagaaattg
     5521 gggtactctg catctgattt ttcccaagtc agccctgttt ttcagagatt tattaacaaa
     5581 aaaaaatgag gcttagaata ttaatccggt ttctgagaat tcgaagtggg aatagtcctg
     5641 gtttagagat gctcaggcca aggtcaagtg caagtgaggt ctgtgggcca ggactccagg
     5701 tcctcctgta actgctagtt ctgggtattt cttctcagta taagaaagac acctacgaca
     5761 tggatgcaga tcttcctgga gttgctattg tgtgttttat tgtagtttac tcaataccgt
     5821 gtttacacag caaaatagca cttggggcta ttctggtcag agattaaaca cagctggctg
     5881 tacagctttt gtttgtaaga acgttttgtt tttcctttgt ggagataagg aacacagtta
     5941 catttagaag acaaactgga gagggactgg gatgccctaa gcaactgctg tgaatgaggc
     6001 tcaacccacc cgggagacaa aaggacacta aggctttccc agggattcct gaatctgcct
     6061 tctctccaag ttacaggttc caccccccag taagttaaag acctttagat cgttccctct
     6121 cccccttccc caaactgcag ccaggggaaa aggaagagga aaccattgat ttggttgcct
     6181 gttgaactca gtagaggttt ggaggaggga ggcggtgaag gagtggagca gtctggacat
     6241 gggcgggtgc cccttcagct ttgccgtggg tgcgcttgtg tcctgctcta tcctgacgtg
     6301 acactcaact gctttcctgc ccccatctcc agccaaggcc atcagagaac acagagaaat
     6361 gccccagtct tggaagagcc taccttgccc ctaccgtggc cccttacacg agtctcgtct
     6421 ctctgggttt tggttttctc tctgcagata gaggatgccc tggcttgcct agcagagaga
     6481 gcagctcctc ggctgtggag agactgtggg aaagagctca gaactgtgag gtgggcgtct
     6541 gactaagcta aatctggaaa acaaagatgt gatttgttaa ggtgatgcac atgcgctctc
     6601 ccaaacctgt tgctttgatg gcataacctc tctgtaaaga aacaaaccaa gcaccatgtc
     6661 agtacctcca cggaggtctg cagtgaaaag gctgtgtggg aagcgcacta agccagcagg
     6721 tttcccctga ggaatggtgg atttgtgttt cactttataa tctgcccaca aaactacttc
     6781 acagggtgct tacactccct ctggcttagg ctttccttct gaggctcatg cagcaagtac
     6841 ataagatgag gagaaggggg aaccatgtgc atccttacct acccctcaaa agatcccatt
     6901 caatgttctg attcccctgg aagacacaag actggaaggg agtgtgagaa ggcagtgact
     6961 ggaaaggaac agcctcctct cacatttgcc ggccagctct gcactcagac ccttagcacc
     7021 gacagcaact gtgttcatgg gggccacagc cagctagatc tctaaacaca ctggaagaat
     7081 ataagtaccc ggtgtacttc ctccttccca actcctatcc catgttccag gcatgtgacc
     7141 gcaagggaag tggccagatg gctggagttc cttttctaat ctctgaggat tttatacact
     7201 gttttaatca tacacacccg cctcctgatt cctcccaatc tgccctcttc cctacccacc
     7261 caacttcagg tccagttacc taccacccat caagaccaat ttataatagg tatattcttg
     7321 gatgtctggc cttctggggc atgattggct atccagtggc aatgctctta aaatggagtg
     7381 tccctctctc ccagcacctc ttagttccca ggagctccct ggctaggggt agaacttcct
     7441 gtccagctgc cctctgcatt gctgggattt ggtctggtgt gcgtttgcac agggcagtgc
     7501 agtcttgcag agttgatgac atggagtgtg gagggagcgt taggagtgat ggttgactag
     7561 acacacctcg gtcccaaggt gatggcatct ttttcccgtt accagtcttc agcatgttca
     7621 gcaagagatg catatgaatg gaaggaacct tcaggagtta actaggaggc tgtaccggcc
     7681 ttgaatatca catgcaccca ccaggaaaac tgactccatg cgatatctta cgtgaaagtc
     7741 tcaaccgtcc taaagtatgg acgacccatc agttattagg atttaatttc agggcaactt
     7801 taaaattgct taagaggtta ttttgaaatg atttcctcca aatagaaggc tttgttctaa
     7861 atttaactga caagctaatt agcattctct gtcaaacaga atgcttccag ttgctttcag
     7921 ttgctaacag cagtaccaag gagtcgaagc tggaaatgcc tggtgctttc cacagcttga
     7981 gtgacatgta gtggacagtg cggacgagga aagacactac atcagttaac atgaggagac
     8041 agcaaaagga cctggtctgc gaggacagcc cgggtgtggg aggcttcaga ggacacagct
     8101 agcagatcca aacttctcac gagcatcacc agaatccttg aactaagggt tttctcaaag
     8161 accgtgaggg aaaaatgaaa ggcagtttag cttatcccag aggtcactgg agatctgttg
     8221 agaggaacta gtctcagaga aaaggcaaag caacagcaag agtgcttttg gacatctggg
     8281 gaactgtcaa tgactccatt atcgcacagg gagagccttg ggtgagatca gaatttcact
     8341 gctttgggcc acgtggtgtg tagctttcct cccaatggaa acatccccac ctggaaggaa
     8401 actcaacaga ctccgggaag aaaagcaaca aaccctgaca agtcacagga aactcttgaa
     8461 acttacagga ttgcaaggtc ccttcctaag gttgcacaca ataatagttg ctggctggga
     8521 gctcagctgt gggcaaggta tgtcaagggc tccccaagcc ctctcccata ctgaagtggg
     8581 ctttgtggtg aagcactgtg gactcaccca tgtttctaag taactacagt aaacccactg
     8641 gctctctaag ctaaacctgg gtgcagtagt ttctttggtc tagcctcagt accatgcctg
     8701 gaacgaacag atgttctcac cattccacta gcaggcacac acgtgtgacc acactagctc
     8761 ctgacaatct aggagcactt tcactgtcat gtgtcgggac atacgtaagg gcagaggctg
     8821 tgttttctcc cagctgcatt aatctactgc cataaccatg aaaatgtcct gtgcctgtgc
     8881 caaacgggtg ctactttcca tgatttgtat taactcattt gatgttcaca aacaaactca
     8941 gcttagggat gggcaagcca agcaaagttc tgcaaagttc ctgaggtcac tgtaatcagg
     9001 tgactagcca cagagtcaga gtttgagccc aggctggcta acttaagact tggtcacaat
     9061 gacacccatg gctgacgtca ggctgctcag ccctgacagg gcataaagag agcatgcatt
     9121 ctccacttac aatggttgtg ataaagccac tgttctctta agcaccattt gttgaaacag
     9181 tcacaagacc aaattacaca gtgccaaagg aaactatgag cgtagggaca gttaccacag
     9241 tggatcgccc tgtggtcatg atttcctggg tagttgagat tagtttgtac agcacacggt
     9301 agagcttact ctgcaggtca ttgcagaagg tcatgcagtg tccccactat tgtaaaatac
     9361 aaaagtgtca catgtttctt gtcagttttt cagcaagcag gttatgggag tggacagtgg
     9421 ctcctggaat gaccagtcat gtcctggccc tttgatatag gccacattta agccgaaaga
     9481 agagcttaga tgtgtgtatt acaaacagaa aaaaacaaaa aaaaaa
//
