LOCUS       NM_001014169            1288 bp    mRNA    linear   ROD 09-FEB-2025
DEFINITION  Rattus norvegicus coiled-coil domain containing 172 (Ccdc172),
            mRNA.
ACCESSION   NM_001014169 XM_342070
VERSION     NM_001014169.2
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
REFERENCE   1  (bases 1 to 1288)
  AUTHORS   Yamaguchi,A., Kaneko,T., Inai,T. and Iida,H.
  TITLE     Molecular cloning and subcellular localization of Tektin2-binding
            protein 1 (Ccdc 172) in rat spermatozoa
  JOURNAL   J Histochem Cytochem 62 (4), 286-297 (2014)
   PUBMED   24394471
  REMARK    GeneRIF: TEKT2BP1 was predominantly expressed in rat testis and
            that its expression was increased after 3 weeks of postnatal
            development; a flagella component predominantly associated with
            mitochondria in the middle piece of flagella.
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            CV104909.1 and BC079324.1.
            
            On Jul 24, 2007 this sequence version replaced NM_001014169.1.
            
            ##Evidence-Data-START##
            CDS exon combination :: BC079324.1 [ECO:0000331]
            RNAseq introns       :: single sample supports all introns
                                    SAMEA5760383, SAMEA5760389 [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on conservation
            ##RefSeq-Attributes-END##
            COMPLETENESS: complete on the 3' end.
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-294               CV104909.1         1-294
            295-1288            BC079324.1         512-1505
FEATURES             Location/Qualifiers
     source          1..1288
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /db_xref="taxon:10116"
                     /chromosome="1"
                     /map="1q55"
     gene            1..1288
                     /gene="Ccdc172"
                     /note="coiled-coil domain containing 172"
                     /db_xref="GeneID:361776"
                     /db_xref="RGD:1359412"
     exon            1..50
                     /gene="Ccdc172"
                     /inference="alignment:Splign:2.1.0"
     exon            51..175
                     /gene="Ccdc172"
                     /inference="alignment:Splign:2.1.0"
     CDS             97..888
                     /gene="Ccdc172"
                     /note="UPF0628 protein C10orf96 homolog; TEKT2-binding
                     protein 1"
                     /codon_start=1
                     /product="coiled-coil domain-containing protein 172"
                     /protein_id="NP_001014191.1"
                     /db_xref="GeneID:361776"
                     /db_xref="RGD:1359412"
                     /translation="MSLESLFQHIIFTEHQAEESRRVMREVRSEIARCRGKIKKATED
                     LNEEKIKLESKVQQFSEKTFLLELLKTRENALERQCSAIVSERDRLLQACEAIKKKTT
                     EQEERFIKEITDFNDNYEITKKRDALMEEDIKLEMADLENQAEALRGEMKSMEYNSGQ
                     LQELQKLKSELLQELFTLQKKLKVLKDEETEAICITKHLEAEKIKIREKPQHDPECVR
                     RLKRELDLYKEEDMESVCRALQIEVDLLESTLVPKDPQDNNSLSR"
     exon            176..261
                     /gene="Ccdc172"
                     /inference="alignment:Splign:2.1.0"
     exon            262..378
                     /gene="Ccdc172"
                     /inference="alignment:Splign:2.1.0"
     exon            379..544
                     /gene="Ccdc172"
                     /inference="alignment:Splign:2.1.0"
     exon            545..646
                     /gene="Ccdc172"
                     /inference="alignment:Splign:2.1.0"
     exon            647..749
                     /gene="Ccdc172"
                     /inference="alignment:Splign:2.1.0"
     exon            750..840
                     /gene="Ccdc172"
                     /inference="alignment:Splign:2.1.0"
     exon            841..1264
                     /gene="Ccdc172"
                     /inference="alignment:Splign:2.1.0"
     polyA_site      1264
                     /gene="Ccdc172"
ORIGIN      
        1 cccctttggc tggacacacc tgagggggcg tcagttgcca gcctctgcct gatcctcaga
       61 ctcccttata aaatattaag ggtgagctgg cccgagatga gtctggagtc gttgtttcag
      121 cacatcatct tcactgagca tcaggccgag gagagccgca gagtgatgcg ggaagtgagg
      181 tcagaaattg ccagatgtcg cgggaaaatt aagaaagcaa cagaggatct gaatgaagaa
      241 aagatcaagt tggaatccaa ggttcagcag ttttctgaga aaactttcct cttagagctt
      301 ttgaaaaccc gtgaaaatgc attagagaga cagtgcagtg cgattgtcag tgagcgggac
      361 agactgctcc aagcctgcga ggctataaag aaaaaaacca cagagcaaga ggaaagattt
      421 attaaggaaa ttacagactt caatgacaat tatgaaataa ccaagaaaag agatgctttg
      481 atggaagaag atatcaagct ggagatggct gacttagaaa accaggcaga ggctttgaga
      541 ggggagatga agtcaatgga atataacagt ggccagttac aggaacttca aaagctaaaa
      601 agtgaactgt tacaagaatt atttactctc cagaaaaagc ttaaagttct taaagatgaa
      661 gagactgaag ccatttgtat caccaaacat ctagaggcag aaaaaatcaa aataagagaa
      721 aagcctcaac atgaccccga gtgtgtgcgc aggcttaaaa gggagctaga tctttataaa
      781 gaagaagaca tggaaagtgt gtgcagagct ctccaaatag aagtagacct tctggagtcg
      841 acactggtgc caaaggatcc tcaggacaat aactccttga gccgatgagt caccccacac
      901 ttgagcatca tagaacccaa catgagtgga acctgtagag cagatctcta tatgaacatg
      961 aggttcagac agctgaagag tgctgacttt tttgtatacc tacatgataa gttttgtctt
     1021 gttacttaag aagtcctcct cgtgcggttt tgaaagatac tgaactccag gcttcttaag
     1081 ctgctctgtc ctttgtgatc tgtctgcctc attttttatt gtggctcgcc ctaagtcctg
     1141 tcaaacacac acggaaagaa tgttcaggtt attgattcag ttgtgttggt gccatttcag
     1201 ccagagaaga gtacttactt tgattttatt ctttttccaa tcataaaatg tctgtcaaca
     1261 gcgaaaaaaa aaaaaaaaaa aaaaaaaa
//
