LOCUS       XM_039081008            1611 bp    mRNA    linear   ROD 11-JUN-2023
DEFINITION  PREDICTED: Rattus norvegicus coiled-coil domain containing 159
            (Ccdc159), transcript variant X14, mRNA.
ACCESSION   XM_039081008
VERSION     XM_039081008.1
DBLINK      BioProject: PRJNA677964
KEYWORDS    RefSeq.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_051343.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_015227675.2-RS_2023_06
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.1
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 06/06/2023
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1611
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN/NHsdMcwi"
                     /db_xref="taxon:10116"
                     /chromosome="8"
                     /sex="male"
                     /tissue_type="kidney"
                     /geo_loc_name="USA: Wisconsin, Milwaukee, Medical College
                     of Wisconsin"
                     /collection_date="2019-03-08"
                     /collected_by="Rebecca Schilling"
     gene            1..1611
                     /gene="Ccdc159"
                     /gene_synonym="RGD1308031"
                     /note="coiled-coil domain containing 159; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 1 mRNA, 3 ESTs, 1 long SRA read, 1 Protein, and 100%
                     coverage of the annotated genomic feature by RNAseq
                     alignments, including 39 samples with support for all
                     annotated introns"
                     /db_xref="GeneID:300442"
                     /db_xref="RGD:1308031"
     CDS             149..1003
                     /gene="Ccdc159"
                     /gene_synonym="RGD1308031"
                     /codon_start=1
                     /product="coiled-coil domain-containing protein 159
                     isoform X12"
                     /protein_id="XP_038936936.1"
                     /db_xref="GeneID:300442"
                     /db_xref="RGD:1308031"
                     /translation="MLIPDSQKLLRCELESLRTQLQAQSKAFEFLNHSVTMLEKESCL
                     QQIKIQQLEEVLNPTSRQGEDGRKWSKEQTQHELYGALAQGLQGLQKTLKEGEELQRS
                     RTTRCLQLLAQEIRDSKKFLWEELELVREEVTFIYQKLQNQEDEISENLLNIQKMQKT
                     QVKCRKVLTKMKQQACDSSSWPEAEGVPADSGGCWKDDLQKELSDIWSAVHSLQSSID
                     CLALSMGTRPKASSLRGQKGHQCQSSQCPSWDSDSDWERPFSKSGSYPPGTDPTQPLS
                     IPYHLAHL"
ORIGIN      
        1 gggaggacca cgcccttctc tgtgactcca cctttggcct ccccgcgttt tccaacgatg
       61 gtgtcctcgg gggatcaaaa cttcagcgtc acagctgggg actggcttcg tggtccctga
      121 tgggagagca tgaacagtta agaacaccat gctgattcct gactctcaga agctcttgcg
      181 atgtgaactg gagtccctca ggacccagct gcaggctcag agcaaggctt tcgagttcct
      241 gaaccactcc gtaaccatgc tggagaagga gagctgtctg caacagatca agatccagca
      301 gctcgaagaa gtgctgaacc ccacgagtcg ccaaggagag gatggccgta agtggagcaa
      361 agagcagacc caacacgagc tgtatggggc cctggctcaa ggcctgcagg ggttgcagaa
      421 gacactgaag gaaggtgagg aattgcaacg gtcccgtacc actcgctgcc tgcagctgtt
      481 ggcccaggag atccgggaca gcaagaagtt cctgtgggag gaactggagc tggtgcggga
      541 agaggtgact ttcatctatc agaagctcca gaaccaggag gacgagatct cagagaatct
      601 cctgaatatc cagaagatgc agaaaacaca ggtgaagtgc cgcaaggttc ttaccaagat
      661 gaagcagcag gcatgtgact catcttcatg gccagaggct gagggggtgc ccgcagacag
      721 cggtggttgc tggaaggatg acctccagaa ggagctgagt gacatatggt ctgctgttca
      781 cagtctgcag agctccatcg actgtcttgc tttgtccatg ggcaccagac caaaggcttc
      841 cagtctcagg ggccagaaag gacaccagtg ccagagttct cagtgcccct cctgggactc
      901 cgattctgac tgggagagac ctttcagcaa gagcggatcc taccctcccg gtacagaccc
      961 tactcaaccc ctctccatcc cttaccatct ggcccacttg tgattcccac agtgtaggcc
     1021 ttgaggctag cactgtacct gggcatttgg tccctggctg gcaaccctga gttctcctgg
     1081 ttcaaaccag accacgacct accttctctc cccatagctt gagcagctgg gactgcttgc
     1141 cctgaagacc cctccagaga gaaaataaac tagctgagac cttcgtccac cctggacttt
     1201 tgcacctgct ggttcaagag tctggggtcc tccccatgcc aaccccagat aactctggta
     1261 tctcaaagga ggcacttttc aggatgtgtg gacagtgatc aagatttagg gtgtattagt
     1321 tgggcatgta tgtgatacaa gcactaggga ggtaggtgga aggaaggtca ctttaaagtt
     1381 aacacagcca agtatgagac cagcctgagc tacagaagac cttgtctcaa aatcaaagtg
     1441 ggcctgccaa atggctcact gggtaaaggc acttactgcc aagtctgaag acctgagttt
     1501 gatcctaggg accctcatgg tggtagagaa ctggctcgtg caagttgtcc tccaacctat
     1561 aaatgcacac cgacacacac cccaataaat aaatgttctt aaaacctttt t
//
