LOCUS       NM_001371565            1436 bp    mRNA    linear   ROD 03-APR-2024
DEFINITION  Rattus norvegicus coiled-coil domain containing 159 (Ccdc159),
            mRNA.
ACCESSION   NM_001371565 XM_003750449 XM_003754378
VERSION     NM_001371565.1
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
REFERENCE   1  (bases 1 to 1436)
  AUTHORS   Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
            Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
            Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
            Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
            Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
            Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
            Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
            Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
            Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
            McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
            Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
            Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
            Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
            Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
            Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
            Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
            Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
            Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
  CONSRTM   Mammalian Gene Collection Program Team
  TITLE     Generation and initial analysis of more than 15,000 full-length
            human and mouse cDNA sequences
  JOURNAL   Proc Natl Acad Sci U S A 99 (26), 16899-16903 (2002)
   PUBMED   12477932
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            JAXUCZ010000008.1 and BC088314.1.
            
            On or before Jul 18, 2019 this sequence version replaced
            XM_003750449.4, XM_003754378.4.
            
            Sequence Note: The RefSeq transcript and protein were derived from
            genomic sequence to make the sequence consistent with the reference
            genome assembly. The genomic coordinates used for the transcript
            record were based on alignments.
            
            ##Evidence-Data-START##
            Transcript exon combination :: SRR26643293.44224.1,
                                           SRR26360181.3046978.1 [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMEA5760383, SAMEA5760389
                                           [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on conservation
            ##RefSeq-Attributes-END##
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-136               JAXUCZ010000008.1  28733989-28734124
            137-270             JAXUCZ010000008.1  28735772-28735905
            271-497             JAXUCZ010000008.1  28735987-28736213
            498-531             JAXUCZ010000008.1  28737918-28737951
            532-620             JAXUCZ010000008.1  28738319-28738407
            621-702             JAXUCZ010000008.1  28738484-28738565
            703-895             JAXUCZ010000008.1  28739488-28739680
            896-963             JAXUCZ010000008.1  28740241-28740308
            964-1040            JAXUCZ010000008.1  28740391-28740467
            1041-1162           JAXUCZ010000008.1  28740812-28740933
            1163-1245           JAXUCZ010000008.1  28741140-28741222
            1246-1344           JAXUCZ010000008.1  28741890-28741988
            1345-1409           JAXUCZ010000008.1  28742156-28742220
            1410-1436           BC088314.1         1140-1166
FEATURES             Location/Qualifiers
     source          1..1436
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN"
                     /db_xref="taxon:10116"
                     /chromosome="8"
                     /map="8q13"
     gene            1..1436
                     /gene="Ccdc159"
                     /gene_synonym="RGD1308031"
                     /note="coiled-coil domain containing 159"
                     /db_xref="GeneID:300442"
                     /db_xref="RGD:1308031"
     exon            1..136
                     /gene="Ccdc159"
                     /gene_synonym="RGD1308031"
                     /inference="alignment:Splign:2.1.0"
     CDS             126..1349
                     /gene="Ccdc159"
                     /gene_synonym="RGD1308031"
                     /codon_start=1
                     /product="coiled-coil domain-containing protein 159"
                     /protein_id="NP_001358494.1"
                     /db_xref="GeneID:300442"
                     /db_xref="RGD:1308031"
                     /translation="MNRCDPLLAGLPRDFDYCVSHLCSSPSLSITSWPAKERGKYSPP
                     LGEPGSSSDKALDCMTHWSTTLEPEIVNTASEQAVKSVAWQKEWDSAPQPQEATSYSN
                     SDLSKDQCHDQELVKRNHSIVKKSLEPSSSKVKVKNTMLIPDSQKLLRCELESLRTQL
                     QAQSKAFEFLNHSVTMLEKESCLQQIKIQQLEEVLNPTSRQGEDGRKWSKEQTQHELY
                     GALAQGLQGLQKTLKEGEELQRSRTTRCLQLLAQEIRDSKKFLWEELELVREEVTFIY
                     QKLQNQEDEISENLLNIQKMQKTQVKCRKVLTKMKQQACDSSSWPEAEGVPADSGGCW
                     KDDLQKELSDIWSAVHSLQSSIDCLALSMGTRPKASSLRGQKGHQCQSSQCPSWDSDS
                     DWERPFSKSGSYPPA"
     exon            137..270
                     /gene="Ccdc159"
                     /gene_synonym="RGD1308031"
                     /inference="alignment:Splign:2.1.0"
     exon            271..497
                     /gene="Ccdc159"
                     /gene_synonym="RGD1308031"
                     /inference="alignment:Splign:2.1.0"
     exon            498..531
                     /gene="Ccdc159"
                     /gene_synonym="RGD1308031"
                     /inference="alignment:Splign:2.1.0"
     exon            532..620
                     /gene="Ccdc159"
                     /gene_synonym="RGD1308031"
                     /inference="alignment:Splign:2.1.0"
     exon            621..702
                     /gene="Ccdc159"
                     /gene_synonym="RGD1308031"
                     /inference="alignment:Splign:2.1.0"
     exon            703..895
                     /gene="Ccdc159"
                     /gene_synonym="RGD1308031"
                     /inference="alignment:Splign:2.1.0"
     exon            896..963
                     /gene="Ccdc159"
                     /gene_synonym="RGD1308031"
                     /inference="alignment:Splign:2.1.0"
     exon            964..1040
                     /gene="Ccdc159"
                     /gene_synonym="RGD1308031"
                     /inference="alignment:Splign:2.1.0"
     exon            1041..1162
                     /gene="Ccdc159"
                     /gene_synonym="RGD1308031"
                     /inference="alignment:Splign:2.1.0"
     exon            1163..1245
                     /gene="Ccdc159"
                     /gene_synonym="RGD1308031"
                     /inference="alignment:Splign:2.1.0"
     exon            1246..1344
                     /gene="Ccdc159"
                     /gene_synonym="RGD1308031"
                     /inference="alignment:Splign:2.1.0"
     exon            1345..1410
                     /gene="Ccdc159"
                     /gene_synonym="RGD1308031"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 ggaccacgcc cttctctgtg actccacctt tggcctcccc gcgttttcca acgatggtgt
       61 cctcggggga tcaaaacttc agcgtcacag ctggggactg gcttcgtggt ccctgatggg
      121 agagcatgaa caggtgtgac cctcttttgg ctggcctacc ccgggacttt gactactgtg
      181 tttctcatct ctgctcatct ccttcactct ccatcacatc ttggcctgct aaggagaggg
      241 gcaagtactc accacctctt ggagagcctg ggtcctcctc agacaaggct ttggactgta
      301 tgacccactg gtccacgacc ttggagcctg agatcgtaaa cactgcttct gaacaagcag
      361 tgaagtctgt ggcctggcag aaggagtggg attcagcacc tcagcctcag gaggctacat
      421 cctattccaa ctcagacttg agcaaggacc aatgtcatga ccaggaactt gtgaagagga
      481 accacagcat agtcaagaaa tccctggagc ccagctcttc caaagtaaaa gttaagaaca
      541 ccatgctgat tcctgactct cagaagctct tgcgatgtga actggagtcc ctcaggaccc
      601 agctgcaggc tcagagcaag gctttcgagt tcctgaacca ctccgtaacc atgctggaga
      661 aggagagctg tctgcaacag atcaagatcc agcagctcga agaagtgctg aaccccacga
      721 gtcgccaagg agaggatggc cgtaagtgga gcaaagagca gacccaacac gagctgtatg
      781 gggccctggc tcaaggcctg caggggttgc agaagacact gaaggaaggt gaggaattgc
      841 aacggtcccg taccactcgc tgcctgcagc tgttggccca ggagatccgg gacagcaaga
      901 agttcctgtg ggaggaactg gagctggtgc gggaagaggt gactttcatc tatcagaagc
      961 tccagaacca ggaggacgag atctcagaga atctcctgaa tatccagaag atgcagaaaa
     1021 cacaggtgaa gtgccgcaag gttcttacca agatgaagca gcaggcatgt gactcatctt
     1081 catggccaga ggctgagggg gtgcccgcag acagcggtgg ttgctggaag gatgacctcc
     1141 agaaggagct gagtgacata tggtctgctg ttcacagtct gcagagctcc atcgactgtc
     1201 ttgctttgtc catgggcacc agaccaaagg cttccagtct caggggccag aaaggacacc
     1261 agtgccagag ttctcagtgc ccctcctggg actccgattc tgactgggag agacctttca
     1321 gcaagagcgg atcctaccct cccgcttgag cagctgggac tgcttgccct gaagacccct
     1381 ccagagagaa aataaactag ctgagacctt aaaaaaaaaa aaaaaaaaaa aaaaaa
//
