LOCUS       NM_001025044            3391 bp    mRNA    linear   ROD 04-JUN-2024
DEFINITION  Rattus norvegicus coiled-coil domain containing 146 (Ccdc146),
            transcript variant 1, mRNA.
ACCESSION   NM_001025044 XM_575334
VERSION     NM_001025044.1
KEYWORDS    RefSeq.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
REFERENCE   1  (bases 1 to 3391)
  AUTHORS   Firat-Karalar,E.N., Sante,J., Elliott,S. and Stearns,T.
  TITLE     Proteomic analysis of mammalian sperm cells identifies new
            components of the centrosome
  JOURNAL   J Cell Sci 127 (Pt 19), 4128-4133 (2014)
   PUBMED   25074808
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            BC082003.1.
            
            On Jun 25, 2005 this sequence version replaced XM_575334.1.
            
            ##Evidence-Data-START##
            Transcript exon combination :: BC082003.1 [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMEA5760383, SAMEA5760389
                                           [ECO:0000348]
            ##Evidence-Data-END##
FEATURES             Location/Qualifiers
     source          1..3391
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /db_xref="taxon:10116"
                     /chromosome="4"
                     /map="4q11"
     gene            1..3391
                     /gene="Ccdc146"
                     /note="coiled-coil domain containing 146"
                     /db_xref="GeneID:499980"
                     /db_xref="RGD:1559535"
     exon            1..123
                     /gene="Ccdc146"
                     /inference="alignment:Splign:2.1.0"
     exon            124..347
                     /gene="Ccdc146"
                     /inference="alignment:Splign:2.1.0"
     CDS             135..3059
                     /gene="Ccdc146"
                     /codon_start=1
                     /product="coiled-coil domain-containing protein 146"
                     /protein_id="NP_001020215.1"
                     /db_xref="GeneID:499980"
                     /db_xref="RGD:1559535"
                     /translation="MEDRSKYIAEESEDEEDEEQEEKEKKGGASTSTETEEDQEDIPS
                     VIVPTINIREERLVDLAQTPAFLCLNELHTSGKLPGTRMAELKAKYTLLHDTVVSTQE
                     SEVQLLENAKRFTEQIQQQQVRLQEADDFPNVFTTEVSKLREQLLKYQNEYTAVQERE
                     YHTQYRLNSLTEEKSLVLKEFEKIPKPGEIEKKTKLLKESTEELRKEVIQKRLEIKNL
                     REDVVSKQKQLMKEQKELEELMDYQVGLKDDVVHHQSVPVQITKEIEKLTRRKIETEK
                     KNVVLEFELKELSDSLKKLENKVSALAEERDDTIKEVEGKRTLLEVKEREYGQLLKLL
                     ELTKENEASSLAERGILDINLRNCLMDKQNYHDELSRKQREKERDFRNLKKTELLLKV
                     SLDALSQAQALNQRLLLEMEAIPKEDLLLPEQRKELHKEVDLAKRNLAQQRSLSEAEA
                     KLVEQQIAEENKLLKEQETMREVLFNLGRMTQIKMEEKEQKAKDFLKSQRRYCDIIKE
                     IKSKKLEIRLYRKRKREIHRRLKEFAGLYDAIRNERNKFVNLLHKAYQKVNEIKERLK
                     MSLNELEILRSSAVSQERKLQNAMLKHSNNVTIRESMQNDVCKITAKLQEMKEKKEAQ
                     LTSMDRLASMITVIEEEMVQLRKKYEKAVQRRNESGVQLIEREEEVCIFYEKMNIQDK
                     VKLHQDIEIHILEEKIRFLKLKVAEKQRQICVTQKLVPIKKSLDANLAVVQIQFSQCA
                     DRIKALEKCFVNPDCQGRVRFIPGKDLTEEEMIKKLDMLELQLAKKEEKLLEKDFIYE
                     QVSQLTNRLKTKTQACKMDTLLLAKKMNSYQKKIKDVTQEMMALVAELSMKQALTIEL
                     QKEVREKEEFIFSCSSRIEKGLPLNREIEKDWLKVLRDEEMYAFATAEKTREYIDTDY
                     RQLPNGVYTTAEQRPNAYIPETDATLPLPKPYGALAPFKPSEPGANRRHIRKPIIKPI
                     EI"
     exon            348..430
                     /gene="Ccdc146"
                     /inference="alignment:Splign:2.1.0"
     exon            431..640
                     /gene="Ccdc146"
                     /inference="alignment:Splign:2.1.0"
     exon            641..698
                     /gene="Ccdc146"
                     /inference="alignment:Splign:2.1.0"
     exon            699..875
                     /gene="Ccdc146"
                     /inference="alignment:Splign:2.1.0"
     exon            876..949
                     /gene="Ccdc146"
                     /inference="alignment:Splign:2.1.0"
     exon            950..1177
                     /gene="Ccdc146"
                     /inference="alignment:Splign:2.1.0"
     exon            1178..1364
                     /gene="Ccdc146"
                     /inference="alignment:Splign:2.1.0"
     exon            1365..1460
                     /gene="Ccdc146"
                     /inference="alignment:Splign:2.1.0"
     exon            1461..1631
                     /gene="Ccdc146"
                     /inference="alignment:Splign:2.1.0"
     exon            1632..1720
                     /gene="Ccdc146"
                     /inference="alignment:Splign:2.1.0"
     exon            1721..1885
                     /gene="Ccdc146"
                     /inference="alignment:Splign:2.1.0"
     exon            1886..2110
                     /gene="Ccdc146"
                     /inference="alignment:Splign:2.1.0"
     exon            2111..2339
                     /gene="Ccdc146"
                     /inference="alignment:Splign:2.1.0"
     exon            2340..2468
                     /gene="Ccdc146"
                     /inference="alignment:Splign:2.1.0"
     exon            2469..2606
                     /gene="Ccdc146"
                     /inference="alignment:Splign:2.1.0"
     exon            2607..2855
                     /gene="Ccdc146"
                     /inference="alignment:Splign:2.1.0"
     exon            2856..3368
                     /gene="Ccdc146"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 cgaaacacga gctgcctcgg gccagtcaga aaggcgaccg taagcacggt tccgctgagg
       61 aagaacgagc caagtcccag cacagcactt aacgacttaa atctcagcct caaaacgatg
      121 ccgaactgtg agaaatggaa gacaggagca aatatatagc ggaagaatct gaagatgagg
      181 aagacgaaga gcaggaggaa aaggagaaga agggaggagc atcaacctcg acagaaacag
      241 aagaggacca ggaagacatc ccttctgtta tagtgcccac gattaacatt cgggaggagc
      301 gcctcgtcga tttagctcaa acgccagctt tcctctgcct gaatgagctg cacaccagcg
      361 gaaagcttcc tggaaccagg atggcggagc tgaaagccaa gtacaccttg ctacatgaca
      421 cagtggtgag cacgcaggag tctgaggtgc agctactgga gaatgccaag cgcttcacag
      481 agcagatcca gcagcagcag gtccgtctgc aggaagctga tgactttccc aatgtcttca
      541 ccactgaggt cagcaaactt cgggagcagc tgctcaagta ccaaaatgaa tacactgcag
      601 ttcaagaaag ggagtaccac actcagtaca gattgaacag cttaacggaa gaaaagagtc
      661 ttgtattgaa ggaatttgag aagataccta agccaggaga aatagagaag aagacaaagc
      721 tcctgaaaga aagcactgaa gaactgcgca aggaggtgat ccagaagaga ctggagatca
      781 aaaacctgcg ggaggacgtg gtgtccaagc agaagcaatt aatgaaggag cagaaggagc
      841 tggaagaact gatggattat caggttggcc taaaggatga cgtggtccat catcaaagtg
      901 ttcctgtaca aattacaaag gagatagaaa aactaacacg cagaaaaata gaaacagaga
      961 agaaaaatgt tgtcttggaa tttgagttga aagagctcag tgactcttta aagaagcttg
     1021 aaaacaaagt cagtgctctt gcagaagaga gggatgacac aataaaggaa gttgagggca
     1081 agcgaacctt actagaagtc aaagaacgag aatatggcca actgcttaaa ctattggaat
     1141 taaccaaaga gaatgaagcc tcctcgctag ctgaaagagg gatcttggat atcaatctac
     1201 gaaactgcct catggacaag cagaattacc atgatgaact ttctcgtaag caacgagaga
     1261 aagaacgaga ttttcggaat ctgaagaaga cagagctgct cctgaaagtg tccttggatg
     1321 cgctctctca ggctcaagcc ttgaatcaga ggcttctact agagatggaa gctatcccca
     1381 aagaagacct tttattgcct gagcaaagga aggagctcca caaagaggtt gacctggcta
     1441 agagaaatct ggctcagcag agatctctgt cagaagccga ggccaagtta gtcgagcagc
     1501 agattgcgga ggaaaacaag cttttaaagg agcaagaaac tatgcgtgag gtgctgttca
     1561 acctcgggcg aatgactcag atcaaaatgg aagagaaaga acaaaaggct aaggacttcc
     1621 tgaaatccca gcgaagatac tgcgacatta ttaaggaaat caaatcaaag aaacttgaaa
     1681 tcaggctata caggaagaga aaacgtgaaa ttcatcggag actcaaagaa tttgccggct
     1741 tgtatgacgc aatcagaaat gaaagaaaca agtttgttaa cttacttcac aaagcttatc
     1801 agaaagtaaa cgaaataaaa gaaaggctca aaatgtcatt aaacgagctg gaaattttaa
     1861 ggagcagtgc tgtctctcaa gaaagaaaac tgcaaaatgc catgctgaag cactccaaca
     1921 acgtgaccat cagggagagc atgcagaatg atgtgtgcaa aatcactgct aaactccagg
     1981 aaatgaagga gaagaaggag gcccagctga ctagcatgga cagactggcc agcatgatca
     2041 ccgtaatcga agaggagatg gtgcagctac gtaagaagta tgagaaggct gttcagcgga
     2101 ggaatgaaag tggtgttcag ctgatagagc gggaagaaga agtgtgcatt ttctacgaaa
     2161 aaatgaatat ccaagataag gtgaaactac atcaggacat cgagatccac atccttgaag
     2221 aaaaaatccg attcctaaaa ctcaaggttg ccgagaagca aaggcaaatt tgtgtgacac
     2281 agaaattagt gccaatcaag aagtccttgg atgccaacct ggctgtggtc cagattcagt
     2341 tttcgcagtg cgcagatagg ataaaagccc tggagaaatg ttttgtgaac cccgactgcc
     2401 agggcagagt ccgcttcatt ccggggaaag atctgaccga agaagaaatg atcaagaaat
     2461 tagatatgct ggaacttcag ctagccaaga aggaagagaa gttactggag aaggatttca
     2521 tctatgagca ggtgtcccag ctcacaaaca ggctcaaaac caaaactcag gcttgcaaga
     2581 tggacacact gctcttagcc aagaagatga acagctacca aaaaaagatc aaagatgtca
     2641 cccaggaaat gatggctctc gttgctgagc tgtccatgaa acaagcccta accattgaac
     2701 tccaaaagga ggtgagagag aaggaagaat tcatcttctc ctgcagttcc aggatagaaa
     2761 agggcctccc actcaacaga gagatcgaga aggactggct gaaggtactt cgagatgaag
     2821 aaatgtatgc ctttgctact gctgagaaga ctcgggagta catagacaca gactacaggc
     2881 agctgcccaa cggtgtttac acaaccgcag agcagcgtcc aaacgcctac attcctgaaa
     2941 cagacgccac acttcctctg cccaaaccgt atggcgcgct ggctccattt aagccctccg
     3001 agcctggagc caacaggagg cacatcagga aacccatcat aaagcctatt gagatctaaa
     3061 cgcatgaagc aatctggcct tctcagagac cggagccagg cttcagacct tctgtggaga
     3121 gcgggcatgg cagccttggg ctgctgatga gctgggcaca gccaacagcg gtggcttgtt
     3181 ttaaaacagt gctgtcctct tacagtcacc aaccgttacg tgacactgga tggaacatag
     3241 actacagtta cgtcaatgtg tattttaact gcttgtgtgt ttctttttca ccgtgtagtg
     3301 actacacttc aggaatgtac agtagacaag atgctataaa agtttaaaat aaataacttt
     3361 tcaatgaaaa aaaaaaaaaa aaaaaaaaaa a
//
