LOCUS       NM_001143896            3056 bp    mRNA    linear   ROD 26-FEB-2024
DEFINITION  Rattus norvegicus coiled-coil domain containing 137 (Ccdc137),
            mRNA.
ACCESSION   NM_001143896 XM_001081807
VERSION     NM_001143896.1
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
REFERENCE   1  (bases 1 to 3056)
  AUTHORS   Baltz AG, Munschauer M, Schwanhausser B, Vasile A, Murakawa Y,
            Schueler M, Youngs N, Penfold-Brown D, Drew K, Milek M, Wyler E,
            Bonneau R, Selbach M, Dieterich C and Landthaler M.
  TITLE     The mRNA-bound proteome and its global occupancy profile on
            protein-coding transcripts
  JOURNAL   Mol Cell 46 (5), 674-690 (2012)
   PUBMED   22681889
REFERENCE   2  (bases 1 to 3056)
  AUTHORS   Castello A, Fischer B, Eichelbaum K, Horos R, Beckmann BM, Strein
            C, Davey NE, Humphreys DT, Preiss T, Steinmetz LM, Krijgsveld J and
            Hentze MW.
  TITLE     Insights into RNA biology from an atlas of mammalian mRNA-binding
            proteins
  JOURNAL   Cell 149 (6), 1393-1406 (2012)
   PUBMED   22658674
REFERENCE   3  (bases 1 to 3056)
  AUTHORS   Ohta S, Bukowski-Wills JC, Sanchez-Pulido L, Alves Fde L, Wood L,
            Chen ZA, Platani M, Fischer L, Hudson DF, Ponting CP, Fukagawa T,
            Earnshaw WC and Rappsilber J.
  TITLE     The protein composition of mitotic chromosomes determined using
            multiclassifier combinatorial proteomics
  JOURNAL   Cell 142 (5), 810-821 (2010)
   PUBMED   20813266
REFERENCE   4  (bases 1 to 3056)
  AUTHORS   Florea L, Di Francesco V, Miller J, Turner R, Yao A, Harris M,
            Walenz B, Mobarry C, Merkulov GV, Charlab R, Dew I, Deng Z, Istrail
            S, Li P and Sutton G.
  TITLE     Gene and alternative splicing annotation with AIR
  JOURNAL   Genome Res 15 (1), 54-66 (2005)
   PUBMED   15632090
COMMENT     PROVISIONAL REFSEQ: This record has not yet been subject to final
            NCBI review. The reference sequence was derived from CH473948.1.
            
            On Jan 23, 2009 this sequence version replaced XM_001081807.1.
            
            ##Evidence-Data-START##
            Transcript exon combination :: DN933087.1, SRR8487227.175059.1
                                           [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMD00132261, SAMD00132262
                                           [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on conservation, expression,
                                      longest protein
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..3056
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /db_xref="taxon:10116"
                     /chromosome="10"
                     /map="10q32.3"
     gene            1..3056
                     /gene="Ccdc137"
                     /note="coiled-coil domain containing 137"
                     /db_xref="GeneID:688298"
                     /db_xref="RGD:1591129"
     exon            1..165
                     /gene="Ccdc137"
                     /inference="alignment:Splign:2.1.0"
     CDS             32..901
                     /gene="Ccdc137"
                     /codon_start=1
                     /product="coiled-coil domain-containing protein 137"
                     /protein_id="NP_001137368.1"
                     /db_xref="GeneID:688298"
                     /db_xref="RGD:1591129"
                     /translation="MVKPGRVARPTARSAGLGGSGQPQARQQQQSQGQQRLASRPGQR
                     SKEKKKVNCKPKNQDEQEIPFRLREIMRSRQEMKKTLSNKKRKKEAQVAFKKTLEKEA
                     KGEEPDITVPKFKQRKGESDVAYIQRMEQEAQHVLFLSKNQATRQPEVQAAPKKEKSE
                     RKKAFQKRRLEKAQKKKEARAVDRLEQELLKDTVKFGEVVLQPPELTVQPRRSTSRDA
                     PGKKSLMLKMLLGPGGVSPAPATSLARQRILGEERERAVQAYRALKKLHRQEVTPAQP
                     PGSSSQRQPQACL"
     exon            166..299
                     /gene="Ccdc137"
                     /inference="alignment:Splign:2.1.0"
     exon            300..522
                     /gene="Ccdc137"
                     /inference="alignment:Splign:2.1.0"
     exon            523..605
                     /gene="Ccdc137"
                     /inference="alignment:Splign:2.1.0"
     exon            606..685
                     /gene="Ccdc137"
                     /inference="alignment:Splign:2.1.0"
     exon            686..3056
                     /gene="Ccdc137"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 tagtttcttg caggacgctc ctccggtaat aatggtgaag cctgggcgtg tagcgcggcc
       61 tactgcgcgg tctgccggtc ttggaggctc gggacaaccg caggcgcgac agcagcagca
      121 gtcgcaggga cagcagcgct tggcctcacg gccgggacag cgcagcaaag aaaagaagaa
      181 agtgaattgc aagcctaaaa accaggatga gcaagaaatc cctttccggc tccgagagat
      241 tatgaggagc cgacaggaga tgaaaaagac actaagtaac aagaagagaa aaaaggaagc
      301 ccaggtggct ttcaagaaga cattggaaaa ggaagcgaaa ggagaggagc cagacatcac
      361 tgtccccaag ttcaagcaga ggaaggggga gtctgatgtg gcctacatcc agcgcatgga
      421 gcaggaggcc cagcacgtgc tgtttcttag caagaaccag gccactcgac agccagaggt
      481 gcaggcagct cccaagaagg agaagtctga gcggaagaaa gcgttccaga agcgacgact
      541 tgaaaaggcc cagaagaaga aggaagcacg agcagtggac agattggagc aagagttgct
      601 aaaagatacc gtaaagtttg gagaagttgt gctgcagccc ccggagctga cagttcagcc
      661 tagaaggagc acaagcagag atgcgcctgg gaagaaatca ctaatgctga agatgctttt
      721 gggccctggt ggtgtgtccc cggctccagc cacctcactg gcccgccagc ggatcctggg
      781 ggaagagcgg gaacgagctg ttcaggctta cagagccctg aagaagctgc atcgacagga
      841 agtgacacct gcacagccac caggcagctc ttcccagagg cagcctcagg cttgtctatg
      901 aagcagagac ataagggtct aatcctctgg aaactggtcc gggagctgtt agaccttgat
      961 gagggagaga cagcagatct tccttcccgg gtaggtcctg agagtaagct ttcagtttgg
     1021 aagggtgctt tctccttccc ctgaagattg tccttttaaa aatgaccacc tctgtatccc
     1081 atctcatgca gggcaagtcc cccacaacac ttgcctggga cacagctggg agagctggta
     1141 ttttccctga gcctagcttc attctaaaac aagtcttggc tgagacaagc caggaccact
     1201 gtggaaagga ctcaatccct taatccagct aattactgaa gcagctggtg caggtcagcc
     1261 tcttgtttta agaagctcct gtgggctcac tgcaaccgct ggaaagcagg ttagcaggac
     1321 tttggaagag cagagatgcc aaggacaagg ggtaggctgg cagccagcac ctttttttaa
     1381 aattggcctg caggggtctg tactcctgac tagaactccc agtccacgtt tggtttgact
     1441 agagatggag tgtcagtact ggctgagtgc cttgaggtat acacatgaaa accaggtttc
     1501 agtggttgac aaagcagagt atttatacta agagggtaca agacttggga gtccaaagcc
     1561 agtcttgact tgaggcaaat gtgaagaagg cctgcctgaa caggctgaga gagtgtctta
     1621 gaaaccttac ctagatatca aaagagctaa gcttggaccc tgctggggaa gcccacagtc
     1681 ctttaccaga ctttggagcc tccctctaac aaagctggtg caaatagtgt gcttttagtt
     1741 tgtctttcaa atgtgtattt tccagagtga agtttatttt tttatgcccc ctcccccagc
     1801 gaagtttatt aaagttataa agttttactc tctttgaagt ctgggccgtt gctctccgac
     1861 acacttattc acagcaccag tcagcatgtg tccatgtaac gggatgagtg tgcaaacata
     1921 ctcccaacag taccaggggt cagaagagag tagggtgcat tggccacttg atttcccact
     1981 gggtatcaag actagggcca ggaagccact gttacaagag ggtatggact tttgagttct
     2041 tgagaagcaa cacagccatc catctaaagc acaactggcc aactgtgagc tgcacacaca
     2101 gctctgggta attatccctt acagggccca cgcccatatg tgctatataa gtacactgta
     2161 gctgtcttca ccattacaga tggttgtgag ccaccatgtg attgctggga attgaactcg
     2221 ggtccttagg aagagcagtc agcactctta accattgagc catctctcca gccccaacat
     2281 ttactaaagc agccccaccc atgcttttgc ttaagccttg tcttggacct agtgatgtgt
     2341 ggagccacct gtctgggctt ctccactctt ctcacttctg gtatggaaga tgtggcagct
     2401 cttgttcctg cccactccaa ggtcaggtct ggtctctgct gccatcttgg actcgaccct
     2461 cagaacactc taaatactgg cgggcaggct ggagcacctc cactgttacc tcagtgccca
     2521 agtgtgtact gacacataca cacttgtagg tacatataca catctctgtg cgtgtaaagg
     2581 tcttcatggt gcagagggtt tgcagatttg agcccagatg gggtaaagat tgatacactg
     2641 gtcaagctat cccagtaggc taccaccccg tgccttctct acttgtccac ttgtgggaac
     2701 tcgtataccg ctgtgcatat gagcattaaa agctgattgg acaaatgcat caagaacatt
     2761 cttgtttctg gtgagctcac agacacgctc ccccaccacc agagttttgt atttttgaga
     2821 cagtgtctca ctgtgtcagc caaagatcct cctgcctctg ccttctgagt gctgggatta
     2881 gagaaaagct ctaccacacc tgcccccact cacccccaac ccccatcttt ttgagagctc
     2941 aactcctgag gtcaaaatga tccttccacc cttgtctctg aagtcactca agccacagtg
     3001 catgccatca catcctgcct attttttgtt tctcatttga gacactagtc tttttt
//
