LOCUS       NM_198766               2375 bp    mRNA    linear   ROD 22-SEP-2024
DEFINITION  Rattus norvegicus coiled-coil domain containing 127 (Ccdc127),
            mRNA.
ACCESSION   NM_198766 XM_006227783 XM_217731
VERSION     NM_198766.2
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
REFERENCE   1  (bases 1 to 2375)
  AUTHORS   Morgenstern,M., Peikert,C.D., Lubbert,P., Suppanz,I., Klemm,C.,
            Alka,O., Steiert,C., Naumenko,N., Schendzielorz,A., Melchionda,L.,
            Muhlhauser,W.W.D., Knapp,B., Busch,J.D., Stiller,S.B.,
            Dannenmaier,S., Lindau,C., Licheva,M., Eickhorst,C., Galbusera,R.,
            Zerbes,R.M., Ryan,M.T., Kraft,C., Kozjak-Pavlovic,V., Drepper,F.,
            Dennerlein,S., Oeljeklaus,S., Pfanner,N., Wiedemann,N. and
            Warscheid,B.
  TITLE     Quantitative high-confidence human mitochondrial proteome and its
            dynamics in cellular context
  JOURNAL   Cell Metab 33 (12), 2464-2483 (2021)
   PUBMED   34800366
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            JAXUCZ010000001.1 and FM059534.1.
            
            On or before Dec 1, 2020 this sequence version replaced
            XM_006227783.3, NM_198766.1.
            
            Sequence Note: This RefSeq record was created from transcript and
            genomic sequence data to make the sequence consistent with the
            reference genome assembly. The genomic coordinates used for the
            transcript record were based on transcript alignments.
            
            ##Evidence-Data-START##
            Transcript exon combination :: SRR22582416.920682.1, BC058157.1
                                           [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMN12840110, SAMN12840111
                                           [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on single protein-coding transcript
            ##RefSeq-Attributes-END##
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-31                JAXUCZ010000001.1  30764443-30764473   c
            32-740              FM059534.1         1-709
            741-2375            JAXUCZ010000001.1  30757010-30758644   c
FEATURES             Location/Qualifiers
     source          1..2375
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN"
                     /db_xref="taxon:10116"
                     /chromosome="1"
                     /map="1p11"
     gene            1..2375
                     /gene="Ccdc127"
                     /gene_synonym="RGD735106"
                     /note="coiled-coil domain containing 127"
                     /db_xref="GeneID:308060"
                     /db_xref="RGD:735106"
     exon            1..80
                     /gene="Ccdc127"
                     /gene_synonym="RGD735106"
                     /inference="alignment:Splign:2.1.0"
     exon            81..211
                     /gene="Ccdc127"
                     /gene_synonym="RGD735106"
                     /inference="alignment:Splign:2.1.0"
     CDS             91..879
                     /gene="Ccdc127"
                     /gene_synonym="RGD735106"
                     /codon_start=1
                     /product="coiled-coil domain-containing protein 127"
                     /protein_id="NP_942061.2"
                     /db_xref="GeneID:308060"
                     /db_xref="RGD:735106"
                     /translation="MNNLNDPPNWNIQPNPRADGGDGSKWNYALLVPMLGLAAFRWIW
                     SRESQKEIEKARRAYHQQTAAFQQDLDAKYHAVISEHRRAVAQLSLELEKEQNRTTSF
                     REALISQGRKLAEEKKLLEQERAQIIQEKSQRQPLRRAYLSCLEEEDEWQRRAQLVLK
                     EVGEALEERQNIYCSLILPRSARQQLEKSLLVRTSADPVAADLEMATGLSDIFKHDKH
                     CGDVWNTNKRQNGKLMWMYLKYWELLVELKKFKKIEKVILGKSE"
     exon            212..2375
                     /gene="Ccdc127"
                     /gene_synonym="RGD735106"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 gcgcctgcgc tctgcaaacg cggcggtggc attacctgtg agataggctg tcagcttagc
       61 tgatgggctt tgctccaggg gtctagctcc atgaataact taaacgaccc cccaaattgg
      121 aatatccagc ccaatcccag ggctgatggg ggtgacggaa gcaagtggaa ttatgctctg
      181 ttggtgccaa tgctcggatt ggcagcgttt cgttggattt ggtctaggga atcccaaaaa
      241 gaaatagaaa aagcaagaag agcatatcat cagcaaacag ctgctttcca gcaggatctt
      301 gacgctaaat accacgctgt gatctcggaa caccggcgcg ctgttgctca gctctctttg
      361 gaactggaaa aagagcaaaa cagaacaacc agctttcgag aagcccttat ctctcagggg
      421 cgtaagttgg cagaagaaaa gaagcttctt gaacaggaac gggctcagat catacaagaa
      481 aaaagccagc gtcagcctct gagacgtgcc tatttgagct gcctggaaga agaggatgag
      541 tggcagagga gagcccagct tgtgctgaag gaggtgggag aagctctcga ggaacgccaa
      601 aatatctact gtagcctgat tcttccccgt agtgcacggc aacagctaga gaagagctta
      661 ctggtgcgca catctgctga tccagtggct gccgacctag aaatggcaac tggcttatct
      721 gacatattta agcatgataa gcattgtgga gatgtctgga acaccaacaa acgccaaaat
      781 gggaagctca tgtggatgta tcttaaatat tgggaactac ttgttgaact taaaaaattt
      841 aaaaaaatag agaaggtcat attaggaaaa tcagaatgaa atgaaactca aggccagaat
      901 gggtcattca ccatggcagt ctgcattcgg tctctgatat ttactctgtt cctttgctac
      961 caaaagtggc ccagaacagc taccctttgt gagaactcaa gtctttccac cttttgagca
     1021 gtgcagtagg gccttagcag ataatgtttt tttataatgc tatgcagcta ttagagatac
     1081 ttttttttta aacattttga gctgctaata gttagcaaaa caagcacaac tatgcatttt
     1141 agttctaggg gaaagaaaaa tacaatatta ctctaagaaa tgttctgcag ttttatctct
     1201 ctaataattg ttctcccttt tctgattcca taatatagta gttatattac caagatttat
     1261 ctttttggaa cacccacata cacacatacc aaaacaaaac aaaacaaaac aaaaaacacc
     1321 accaaatatt tcttatgccc agacagtgcc ccagtgaata tttagaattg agctggtcaa
     1381 taagcatgtt atttattagc aatgatatgc agtcaatatt atttgtcatt taaaagtaat
     1441 agtgttgctt tttgtgtgac tctttactat tcttttgaga cagtcttact gcatagccca
     1501 ggtgggcctc atatgtgtag tcttcctgcc tcaggctccc aagtgctgtg attacaaggg
     1561 tggattacac tattgggttg ataattttgc atgtattgat aagtacttat aatgcattta
     1621 catacagctt atatgagttg accctttgta cataactcat ataatcctta ctctggtttt
     1681 atgggctaag tactattatc ttgtaaatgg taacttttca agagacccag attctatgac
     1741 ttgccatggt ttctaagact ccacctatag ttgccctcag gactaggatt tatgatagca
     1801 agaaagataa aatcagcaga gaataggcat gcagaagagt ctagagggag cctgatggag
     1861 ccacccaggg ttacactgta gaatcacagg aagcactgtt cagtttagga gtattactag
     1921 aaacatgaca agttcccagg agagctcact ggggactatc aggattttag tagagggagg
     1981 gctattcatg tgacccttca tacagttcca ttcctacagg aaggcaagtg ctagagatca
     2041 cttgtagtct gtaagcagtc tacgtgtggt gagccactct tgctagttac tagtcctgga
     2101 aactcccagc atctagactc ctgtgaacta gccgtgtgtg aggatgcact ccgaagtctg
     2161 ttaagtgagc ttttccacag agccttattt tacagagggt gggatctgga gcctcgatat
     2221 ggagaaagca atttgtctaa gtcataggta gaattttgtt ggaatggatg tgagctgggt
     2281 gtctgactca caggtgtggg accctgtgtg tgtgcgttat ttgtcagtgg ccatgaagga
     2341 agtgaataaa gtggtcagct tgtgtttaga tccta
//
