LOCUS       NM_001399562            1930 bp    mRNA    linear   ROD 24-JUN-2024
DEFINITION  Rattus norvegicus coiled-coil domain containing 122 (Ccdc122),
            mRNA.
ACCESSION   NM_001399562 XM_017599961
VERSION     NM_001399562.1
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            JAXUCZ010000015.1.
            
            On Jan 12, 2022 this sequence version replaced XM_017599961.2.
            
            ##Evidence-Data-START##
            Transcript exon combination :: SRR26360186.735760.1,
                                           SRR26643299.57463.1 [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMEA5760383, SAMEA5760389
                                           [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on expression
            ##RefSeq-Attributes-END##
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-228               JAXUCZ010000015.1  58816927-58817154
            229-322             JAXUCZ010000015.1  58832840-58832933
            323-438             JAXUCZ010000015.1  58833754-58833869
            439-837             JAXUCZ010000015.1  58849483-58849881
            838-954             JAXUCZ010000015.1  58850574-58850690
            955-1930            JAXUCZ010000015.1  58878394-58879369
FEATURES             Location/Qualifiers
     source          1..1930
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN"
                     /db_xref="taxon:10116"
                     /chromosome="15"
                     /map="15q11"
     gene            1..1930
                     /gene="Ccdc122"
                     /note="coiled-coil domain containing 122"
                     /db_xref="GeneID:100360752"
                     /db_xref="RGD:2321506"
     exon            1..228
                     /gene="Ccdc122"
                     /inference="alignment:Splign:2.1.0"
     exon            229..322
                     /gene="Ccdc122"
                     /inference="alignment:Splign:2.1.0"
     CDS             277..1152
                     /gene="Ccdc122"
                     /codon_start=1
                     /product="coiled-coil domain-containing protein 122"
                     /protein_id="NP_001386491.1"
                     /db_xref="GeneID:100360752"
                     /db_xref="RGD:2321506"
                     /translation="MSGDIERKNEVIPTKAVVKEDTSSLTDVVEQVAKQQLSQTSEIE
                     KHKKVLFQLQMELHDLEKQIATTAEEAKETDRQMHQQDAAMENSKLQCGLLEAQIESL
                     YSESLKLKFDTETAQEKFEEQMKKYNSYYVKIKAFKDNLGEIKSQCSFMTELCEKRDL
                     IKNLKTMKEDLMENLQNSQGNCTLRIQEDISELKNKLMTVKESIIEKTSFLEEEKKTH
                     EKLRKEIEVQHKRYDAILKRLRCQVHRTQLNRRKWQWSIQHLEKTAAELKTRIREKES
                     SGTRNRPAALWERIL"
     exon            323..438
                     /gene="Ccdc122"
                     /inference="alignment:Splign:2.1.0"
     exon            439..837
                     /gene="Ccdc122"
                     /inference="alignment:Splign:2.1.0"
     exon            838..954
                     /gene="Ccdc122"
                     /inference="alignment:Splign:2.1.0"
     exon            955..1930
                     /gene="Ccdc122"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 gggtcagagc ccgcggtcac cggagaggcc ggtggagacc gcctagggcc ggggcgctga
       61 ggcgctaagg gcactgaggc tcggagggcc gcgggcgagc gggtctcgtg aggcgcccgg
      121 aagggaagaa gcgtccctcc tccctgcggg gccttggcga ctctagaagg atctgctgac
      181 ctagcagcaa agtcagcttg tcacttagcg cctgcaatct gggctcaaga gtaaagaaag
      241 caaactaatc cagggaaaag acttactaga caaagaatgt caggagacat agaaaggaag
      301 aatgaagtca ttcctacaaa agctgtggtc aaagaagaca catcttcatt gactgatgtt
      361 gtagagcaag tcgcaaagca acagctatca caaacatcag aaatagaaaa acataagaaa
      421 gtgctcttcc agttgcagat ggaacttcat gatcttgaaa aacaaatagc aactactgct
      481 gaagaagcta aagaaacaga caggcaaatg catcagcaag atgctgccat ggagaattct
      541 aaacttcagt gtggactctt ggaagctcaa attgagtcct tatattcaga aagcttaaaa
      601 cttaaatttg atacagaaac agcccaagaa aaatttgagg agcaaatgaa gaaatataat
      661 tcatattatg taaaaataaa agcttttaaa gataatttag gagagataaa aagccaatgt
      721 tcctttatga ctgaactctg tgaaaaacga gatctcatca aaaacctaaa gacaatgaaa
      781 gaagatctta tggaaaatct ccaaaattca caagggaact gcacactacg aatacaggaa
      841 gacatttcag agctaaagaa taaacttatg acagtaaaag agtcaatcat tgagaaaaca
      901 tcttttcttg aagaagagaa aaagacacat gaaaaattaa gaaaagaaat agaggtacag
      961 cataagagat atgacgcaat tcttaagcgc ttgcgctgtc aggtgcacag gactcagtta
     1021 aataggagga aatggcagtg gagcatccaa cacctggaaa aaactgcagc tgagttaaaa
     1081 actcgaatca gggagaagga aagcagtgga acacggaaca ggccagcagc attgtgggag
     1141 agaatactgt gaagatcctc tggactctta acagccagca cacagcatcc gagccctatc
     1201 tcaatgacag tcatttttct ttgtcttcct cctcttcctc ctttttctgt gttgaattgg
     1261 ttgtttattg gttaaagtgc cttcctgtct atagagcaca gcataaggta gacagtagca
     1321 gtgtttgcag gaagctagca gaaaagtata tgtgcatatt ccaaaggtgc actcctaaat
     1381 gcttgtttat aactgttgaa gtcactggct tacaagttaa aaatttagag gaaacaattg
     1441 gatttttaat gacttaagtt gctaagataa atagttgtct gtttaagatt ttttctacaa
     1501 ctgtcttcaa agtagccctt aaatattaat attcatgata atgccattat ctgttctatt
     1561 gtttcctctt ttctccagga ggtagcaatc attttccttt gttattaaat aacatatatt
     1621 agagtgttac agtacataag attggtgttt actcttcagt ctataaattc tttattccta
     1681 tattgtgact aaaataaagt tatagcatcg tacgaggcag caaacaacaa aactcttcaa
     1741 agaggtattt ttccacactg aaaggcaatt gttttgtcaa tggcaataaa ttgaatgtaa
     1801 aacacctctg aagataagat tgctctcttt catgctctgt tgatcataac tacagaaaag
     1861 caaaactgta attactaaga catggtttta aagtattcac ttgtagtatt aaagactttc
     1921 aaagaagcaa
//
