LOCUS       NM_001017502            2224 bp    mRNA    linear   ROD 03-APR-2024
DEFINITION  Rattus norvegicus coiled-coil domain containing 117 (Ccdc117),
            mRNA.
ACCESSION   NM_001017502 XM_573647
VERSION     NM_001017502.1
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
REFERENCE   1  (bases 1 to 2224)
  AUTHORS   Lau,N.C., Seto,A.G., Kim,J., Kuramochi-Miyagawa,S., Nakano,T.,
            Bartel,D.P. and Kingston,R.E.
  TITLE     Characterization of the piRNA complex from rat testes
  JOURNAL   Science 313 (5785), 363-367 (2006)
   PUBMED   16778019
COMMENT     PROVISIONAL REFSEQ: This record has not yet been subject to final
            NCBI review. The reference sequence was derived from BC087119.1.
            
            On Apr 29, 2005 this sequence version replaced XM_573647.1.
            
            ##Evidence-Data-START##
            Transcript exon combination :: BC087119.1, CK364773.1 [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMEA5760494, SAMN11044071
                                           [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on single protein-coding transcript
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..2224
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /db_xref="taxon:10116"
                     /chromosome="14"
                     /map="14q21"
     gene            1..2224
                     /gene="Ccdc117"
                     /note="coiled-coil domain containing 117"
                     /db_xref="GeneID:498404"
                     /db_xref="RGD:1561762"
     exon            1..207
                     /gene="Ccdc117"
                     /inference="alignment:Splign:2.1.0"
     CDS             26..859
                     /gene="Ccdc117"
                     /codon_start=1
                     /product="coiled-coil domain-containing protein 117"
                     /protein_id="NP_001017502.1"
                     /db_xref="GeneID:498404"
                     /db_xref="RGD:1561762"
                     /translation="MAALGRPFSGLPLSGSADFLQSPPAFAGRAFPPGAAGHDLAPRP
                     GVRGPPSSPDGRTARGRVSIHCRKKHKRLAEDDECPVRKKRLTEAELGAVADEWVLGT
                     HQGIEGHGVNTCPGGLSVPSILDAVCEEMDQTTGEPQCEVARRRLQEIEDRIIDEDEE
                     VESDRNVSHLPSLVLSDTMKTGLKREFDEVFTKKMIESMSRPSMELVLWKPLPELLSE
                     KPKPSSNPKNYMGESQTKHTATGTAFPQRTEVLLEPQCTDTPLYHSLETAASTEEEME
                     L"
     exon            208..258
                     /gene="Ccdc117"
                     /inference="alignment:Splign:2.1.0"
     exon            259..483
                     /gene="Ccdc117"
                     /inference="alignment:Splign:2.1.0"
     exon            484..621
                     /gene="Ccdc117"
                     /inference="alignment:Splign:2.1.0"
     exon            622..2200
                     /gene="Ccdc117"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 cggacgctgc ctcgtctgcg aagccatggc agccctcggc cggcccttca gcggcctccc
       61 tctgagcggc agcgcggact tcctgcagtc gccgccggcc ttcgcgggcc gggccttccc
      121 gccaggagcc gccggccatg acctggcccc gcggccgggt gtccgcggcc cgccgagcag
      181 cccggacggt agaacagcgc gcggacgtgt ttccattcac tgtagaaaga aacacaagcg
      241 attggcggag gacgatgagt gtccagtaag aaagaagcgc ttgactgaag cagaacttgg
      301 tgcagttgcc gatgagtggg ttcttggcac acatcagggt atagaaggtc atggggtaaa
      361 cacgtgtcct ggtggccttt ctgtgcctag catcctagat gctgtctgtg aagaaatgga
      421 tcagacaact ggagaaccac agtgtgaagt tgcccgaaga aggcttcaag agatcgagga
      481 caggataatt gacgaagatg aagaggttga aagtgacaga aatgttagcc acctcccaag
      541 tcttgtcctt tctgatacca tgaaaacggg tttgaagagg gaatttgatg aagtcttcac
      601 aaagaagatg attgagtcta tgagccgtcc ttctatggag cttgtgctct ggaaacctct
      661 ccctgaactc ctttctgaga agccaaagcc atcatctaac cctaagaact acatgggaga
      721 gagccaaacg aagcacacag ctacgggcac tgccttccca cagagaactg aagtgttact
      781 ggaacctcag tgcacagaca caccgcttta ccatagtctg gagacagctg ctagcacaga
      841 ggaagagatg gagctctaga caccagtgcc tgctccagcg tgacaagtcg tagaaggctc
      901 ctgtgttcag tagtgagcct gcctgcatag aataggggcc tgaaagtttt atgaaacggg
      961 tgtaatatct cctccacctg tgacttgggt gggactgtca ttgtgggtag ccatttattg
     1021 aattcaactt tttgccaagg aagcttatct caagggaaat ggagtttttt agtaggctta
     1081 tccaagaaat gttacagtct ctttaaagac agctctagat gctggatgtg ttgcagtgac
     1141 ttaagtcatc tgtcacattg ttgaagccat tctttcttga gatgattata tacagggatg
     1201 ctcctaattg ccactgcacc ctgattgctg aagtcatata ctgagctact cgtagtggtc
     1261 actgtacact tggggctcgg gagggaagat agcaggactt tgagtctctt gtgaaggatt
     1321 gaacaagcaa agaagcctgt gttggtgtca ggttggtgta gccacatcac tcaagcagca
     1381 acccttggtc tcctttcatg actgataagc tcagttggtc agtaatgttt acacctcaat
     1441 taacttaagt gattgattta aagggtgtgg ggtaaattgc ctgtgagaga agggtctttt
     1501 cctgaatcct aaggacatgc tgtgtcgtca ggtaaaccta cattgattgc ttctagagtt
     1561 taaaaaggga agcttgtgct tgtattagca agttgagttt tttaatgttg gttccaaaaa
     1621 cagtgaatta gctgagaaga aatggacaag tgtcgtggaa atgctttact gaaatagcta
     1681 attgtccggt gcttaagcta ttgtgcagtt aagcctaaag agctagccga agatggcctc
     1741 ctgccagcgg gaaatcttga ccctttagta ccgaaccagg ctcaaggtgt tctttgggaa
     1801 taaccagggt taaagttttt aatttctcag gaagagctct tcagcatggc aggatgtgta
     1861 atgagggctg tagagtggta agaggtctgc agcagatcac ctcggttcag ttttcagttt
     1921 ctgggtttct tctcctctgt gtaggggaaa acagtaaaga ggtttatgct gagtagaggt
     1981 gaatttttta gaaacttagc ttcttggcat tttgaaccca tgctgaaatc cctcctgtgg
     2041 atggcatagg agtcacacgt ctgttcagtg gactgtttct tctcttgcct gttgttcctg
     2101 ctctccctat ttctgtctgg atgtcaggaa aaggtttaat gtttaatatt taaacaaaat
     2161 atttatgtct acacaataaa gttacgcaac ctccaaacca aaaaaaaaaa aaaaaaaaaa
     2221 aaaa
//
