LOCUS       XM_039087181            1153 bp    mRNA    linear   ROD 11-JUN-2023
DEFINITION  PREDICTED: Rattus norvegicus chibby family member 3 (Cby3), partial
            mRNA.
ACCESSION   XM_039087181
VERSION     XM_039087181.1
DBLINK      BioProject: PRJNA677964
KEYWORDS    RefSeq.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_051345.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            [WARNING] On Feb 22, 2024 this sequence was replaced by
            XM_039087181.2.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_015227675.2-RS_2023_06
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.1
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 06/06/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: incomplete on the 5' end.
FEATURES             Location/Qualifiers
     source          1..1153
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN/NHsdMcwi"
                     /db_xref="taxon:10116"
                     /chromosome="10"
                     /sex="male"
                     /tissue_type="kidney"
                     /geo_loc_name="USA: Wisconsin, Milwaukee, Medical College
                     of Wisconsin"
                     /collection_date="2019-03-08"
                     /collected_by="Rebecca Schilling"
     gene            <1..1153
                     /gene="Cby3"
                     /note="chibby family member 3; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 5
                     ESTs, 2 Proteins, and 100% coverage of the annotated
                     genomic feature by RNAseq alignments, including 4 samples
                     with support for all annotated introns"
                     /db_xref="GeneID:690544"
                     /db_xref="RGD:1594715"
     CDS             <1..723
                     /gene="Cby3"
                     /codon_start=1
                     /product="protein chibby homolog 3"
                     /protein_id="XP_038943109.1"
                     /db_xref="GeneID:690544"
                     /db_xref="RGD:1594715"
                     /translation="VIAGRQVGEVIQQWDQAWDSSLGTSTTSSSATGSPSSFQDIRAP
                     DTRAPSVANLHFTLEAFECLSASQVGRLWEQVRQFWADHFSRRFSPRRPPLRHISSTS
                     TFYLLDYRTRQAELGLSYGAPRTRLSDEAFVFRGGRWTAEGKGARARTSLPSPTTPTW
                     KPQGQPIKSQVLLEENNYLKLQQELLMDMLTETTARMQLLEKKVATDDDPAAPARSWK
                     RKIHKHEGAGVLIVQPRALESR"
ORIGIN      
        1 gtcatagctg gcagacaggt gggtgaagta atccagcaat gggaccaggc ctgggacagc
       61 agcttgggaa cctccaccac atcttccagt gccactggct cgccttcatc attccaggac
      121 atcagggctc cagacacccg tgcgcccagc gtggccaacc tacacttcac cctggaggct
      181 tttgagtgcc tgtccgcgag ccaagtgggc cgcctgtggg aacaagtgag gcaattctgg
      241 gccgaccact tctctcgtcg cttctcgcca cggagaccgc cgctgcgcca tatctcatcc
      301 acgtccacct tctacctgct ggactaccgc acgcgacagg ccgagctggg gctcagctac
      361 ggcgcgccgc gcactagact gagcgacgag gccttcgtgt tccgcggcgg ccgctggacc
      421 gcggagggga aaggcgcacg cgcgcgcacg tctctgcctt cgcccactac cccgacctgg
      481 aagccacaag ggcagccgat caagagccag gtgctgctgg aagagaacaa ctacctgaag
      541 ctgcagcaag aactgctcat ggacatgctg accgagacta cggcgcgcat gcaactgctg
      601 gagaagaagg tggccacaga tgacgacccc gcggccccgg cgcgctcctg gaagagaaag
      661 attcacaagc acgagggcgc gggcgtactt atagtccagc cgcgcgctct ggagtcgcgg
      721 tgatgcaata aagctgtacc taaagcaggg ctgcgcgtgc acgccttgct ccgcccagcc
      781 ccgcccgtgt agcccgggtg atccgcttcc cgagggcatg ccgggtgttc cttgggtgga
      841 gttgcgagtg acacagataa gtggagaccc gagtgaaggc gcgtggggcc cttgggcggt
      901 ggggggagag ggcgcttgga tttttctcga aaccttaggt tctgctttcc cacacgcaca
      961 ggaatggttc tctttgtttt gctttctatt ggtgaagccc gtaattttat catacgcgta
     1021 ataaagactt ctgtttgacc cagcatttta aaaactgtat aggaagccag gcgagggtgg
     1081 cccacgcctt taattcaagc cctcgggaag aagaggtagc cagatctctg gggttcaagg
     1141 ctacacagag aaa
//
