LOCUS       XM_039098052             946 bp    mRNA    linear   ROD 11-JUN-2023
DEFINITION  PREDICTED: Rattus norvegicus catsper channel auxiliary subunit zeta
            (Catsperz), partial mRNA.
ACCESSION   XM_039098052
VERSION     XM_039098052.1
DBLINK      BioProject: PRJNA677964
KEYWORDS    RefSeq.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_051336.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_015227675.2-RS_2023_06
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.1
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 06/06/2023
            ##Genome-Annotation-Data-END##
            COMPLETENESS: incomplete on the 5' end.
FEATURES             Location/Qualifiers
     source          1..946
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN/NHsdMcwi"
                     /db_xref="taxon:10116"
                     /chromosome="1"
                     /sex="male"
                     /tissue_type="kidney"
                     /geo_loc_name="USA: Wisconsin, Milwaukee, Medical College
                     of Wisconsin"
                     /collection_date="2019-03-08"
                     /collected_by="Rebecca Schilling"
     gene            <1..946
                     /gene="Catsperz"
                     /note="catsper channel auxiliary subunit zeta; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 2 ESTs, 2 Proteins, and 100% coverage of the annotated
                     genomic feature by RNAseq alignments, including 6 samples
                     with support for all annotated introns"
                     /db_xref="GeneID:100362120"
                     /db_xref="RGD:2318763"
     CDS             <1..807
                     /gene="Catsperz"
                     /codon_start=1
                     /product="cation channel sperm-associated auxiliary
                     subunit zeta"
                     /protein_id="XP_038953980.1"
                     /db_xref="GeneID:100362120"
                     /db_xref="RGD:2318763"
                     /translation="PKSPLLFHGIATRRGVQWLPNATALPWLVLHIQPFPKPTIQGFL
                     SCFPADFAPTPHDCASKPASIKQKVCTNDSLNALATLLVCDQQLVPKQENSRRSLDRS
                     SPYGDVRQLWSTATLSTTNASVSGVCEDFDEEGKSVSKLRKHSQAISITEALNLEPEE
                     IQQQARLELEQYHSRSLEREIEENFLATSSESEVSLSKPHRAYWIEQQNRLPLPLMDI
                     METEVLDILKKALSTYRSTIGRSHFMTKELQGYIEGMKKRRNKRLYCLSQ"
ORIGIN      
        1 ccaaagagcc ctcttttgtt ccacggaatt gcaacccgga gaggagtcca atggttgcca
       61 aatgccaccg ctcttccctg gctggttctt cacatccaac catttccaaa gcccaccatc
      121 caaggctttc tgtcttgctt ccctgccgat tttgccccca cacctcacga ctgtgcctca
      181 aaacctgcat caataaaaca aaaagtctgc accaacgact ccctgaatgc cttggctact
      241 ttacttgtgt gtgaccagca gctggtgccc aaacaggaaa acagtcgccg cagcttggat
      301 agatccagcc cgtacggaga tgttcgtcaa ctatggagca cggccacgct gtccacaacg
      361 aacgcgtcgg tatccggcgt ctgcgaggac ttcgacgaag agggcaaatc tgtaagcaag
      421 cttcgcaagc acagccaggc catttctatt acggaagccc tgaacctcga gccagaggag
      481 atccagcagc aagcacgtct agagcttgaa cagtaccata gcagatcctt ggagcgtgag
      541 atcgaagaga atttcttagc aacatcttca gaatcagaag tcagtctatc aaagccgcat
      601 cgagcctact ggatagagca gcagaacagg ctgcccctgc ctctgatgga tatcatggag
      661 acggaagttc tggacatcct caagaaagcc ctcagtacat ataggtccac gattggcagg
      721 agccacttca tgactaaaga gctgcaggga tacatcgaag ggatgaagaa gcgccggaac
      781 aagaggctgt actgtttgtc tcagtgaacc tccagctcaa gtggccgacg agacgtcctc
      841 cccatgtcct ttccgtccct cgaacccaag ctcgaaccca agctcgaacc catctgcatg
      901 aaatttgaat catagagaaa ttaaagagtc tatgcatggt tccaga
//
