LOCUS       XM_039091455            2846 bp    mRNA    linear   ROD 11-JUN-2023
DEFINITION  PREDICTED: Rattus norvegicus catsper channel auxiliary subunit
            epsilon (Catspere), transcript variant X15, mRNA.
ACCESSION   XM_039091455
VERSION     XM_039091455.1
DBLINK      BioProject: PRJNA677964
KEYWORDS    RefSeq.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_051348.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            [WARNING] On Feb 22, 2024 this sequence was replaced by
            XM_039091455.2.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_015227675.2-RS_2023_06
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.1
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 06/06/2023
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2846
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN/NHsdMcwi"
                     /db_xref="taxon:10116"
                     /chromosome="13"
                     /sex="male"
                     /tissue_type="kidney"
                     /geo_loc_name="USA: Wisconsin, Milwaukee, Medical College
                     of Wisconsin"
                     /collection_date="2019-03-08"
                     /collected_by="Rebecca Schilling"
     gene            1..2846
                     /gene="Catspere"
                     /note="catsper channel auxiliary subunit epsilon; Derived
                     by automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 3 Proteins, and 100% coverage of the annotated genomic
                     feature by RNAseq alignments, including 3 samples with
                     support for all annotated introns"
                     /db_xref="GeneID:689786"
                     /db_xref="RGD:1565309"
     CDS             137..2569
                     /gene="Catspere"
                     /codon_start=1
                     /product="cation channel sperm-associated auxiliary
                     subunit epsilon isoform X10"
                     /protein_id="XP_038947383.1"
                     /db_xref="GeneID:689786"
                     /db_xref="RGD:1565309"
                     /translation="MVLTKQMNTLGQYPVIYTLEKGLKYDPGPLTPDGTWIIHLPMTS
                     DDIIKQIRGNKVSFQDCFIASLQFLLTFPMNVISDPPEYEPLSLPAGSPLLASWHTCI
                     PTFVLLATEHETFQTNNSFQTWTKVRAPPGVLTEAQRHSLRDVILLDQRILFLVEGTI
                     YLKTKDSFKIIDENNGIAGTGILGFSKRRWCQIRYLYKLASKKSLLFAWSKDVVYAGY
                     TNLRFLVFTTISKLKDVLKLSPGDTLEIMTVEYLWHPQEVAFMLSHCTDCSTIKDVRI
                     VLFNSMHSKYVLQDFDIQVAKETQLDCRFLLSAMPDMILWDGHSTYYSHNNFTEVGII
                     ETDSGNTNLSLIAEGSKVHNVVADTTGNILVKMENNDLFYIKDGIAEIVPLSRWVNTT
                     AETALVLDKSFQVNILHYNQNLDEKYQLHLQSYPLVLELQSKNKGLEDMCPYLTFQHD
                     VHSQFYHLDKGDSLTVWTQIVYPENRGLDILVDYYGSNILTWTQNTEYEIASGFCTKS
                     MITRFFQTTNYESVKNYYDLEKKNTGLTLIKIRPSEYTRTCPTVIPVFEISVGCDPTK
                     YIQVQGFNNTRCHRRDFSYVIDKELLRDSPHENLKVRYEVAKYGCPRTVDMEEMFHPV
                     VELYDENGFIKIVDANFILWEVHGRNDYMYNSTMQQNGCINEAQTWDIMIEENPGVPM
                     EDIWGPQNYRPCFSYAIGTPGDLSQPYEIINYSNKNALKWSSSYAAMYVYRLKVLDPN
                     YSFCNLTTYFAIESLGQIPRSSIYLVAALVFVLMLTFISVLVLSYFWYSKIYRRFIIE
                     PLHKPPGKQKKN"
ORIGIN      
        1 cattgctata ctgtaaaacg cctggtaatc acaagataag cccaatcaac atcaacgaca
       61 tgcaggaaga tgaacggctc ctgactgtgg atagttctaa catttgcttc ttgtggtatt
      121 acacagttgt aattccatgg tactaaccaa gcagatgaac accctgggac agtatcctgt
      181 catatacaca cttgagaagg ggctgaagta cgacccaggt cccttaactc cagacggaac
      241 ctggatcatt catctaccaa tgacctcaga tgatataatc aaacagataa gaggtaacaa
      301 agtgtctttc caggactgct tcattgcatc cctccagttc ctgctgacat ttcccatgaa
      361 cgtcatttct gatcctcctg aatatgagcc actcagcctg ccagctggaa gtccgttgct
      421 ggccagctgg cacacctgca tccccacatt tgtcctcttg gccactgaac atgagacctt
      481 ccaaacgaac aattcctttc aaacctggac gaaagtaaga gcccctccag gtgtcctgac
      541 tgaagctcaa aggcacagtc tgagggatgt gatcctattg gaccaaagaa ttctgtttct
      601 cgtagaaggt accatttacc taaaaacaaa ggattcattt aaaataatag atgaaaacaa
      661 tggtattgct ggaactggaa tccttggctt ttcaaaaaga agatggtgtc agattaggta
      721 tttatacaag cttgcatcaa aaaaaagctt attgtttgct tggtcaaaag atgtagttta
      781 cgctggatat actaatctta gatttctggt attcacgact atttcaaagc taaaagatgt
      841 tctaaagctt tcccccggtg acaccctgga aataatgact gttgagtact tgtggcaccc
      901 gcaggaggtt gcttttatgc tgtcccactg cacagactgc tcgactatca aggacgttcg
      961 catagtgctg tttaattcaa tgcattctaa atacgtgctc caggactttg acatacaagt
     1021 ggccaaggag acccagttag actgtcgctt tcttttatca gccatgccgg atatgatcct
     1081 gtgggatgga cacagcactt actatagcca caataatttc accgaagttg gaattattga
     1141 gacagactca ggaaacacca atttgtcatt aatagcagag ggcagcaaag tccacaacgt
     1201 cgttgcagat actactggaa atattttggt aaaaatggaa aataatgatt tgttctacat
     1261 caaggatggc attgcagaaa tagttccgct atcgaggtgg gtaaacacga cagcagagac
     1321 agcacttgtg cttgacaaat cttttcaagt aaatatatta cactataatc aaaatctcga
     1381 cgagaagtac cagttacatc tacagtcata tccgttggtt ctggagctac aaagtaaaaa
     1441 taaaggttta gaagacatgt gcccatatct gacatttcaa cacgatgttc acagtcagtt
     1501 ttaccattta gacaaaggag atagcctgac agtttggact caaatagtct acccagaaaa
     1561 tcggggtctc gatattctcg tggattacta tggatcaaat atattaactt ggactcaaaa
     1621 cactgagtac gagattgcat caggattctg tactaaaagt atgataacaa ggttttttca
     1681 gacaaccaat tacgaatcag taaagaatta ctatgattta gaaaaaaaga acacaggtct
     1741 cacacttata aagatacgac ctagtgaata tacaagaaca tgtccaacag tcataccggt
     1801 gttcgaaatt agtgttggct gcgaccccac taaatacatt caagtacaag gatttaataa
     1861 taccagatgt catcgtcgtg acttttctta tgtgattgac aaggaacttc tgagagatag
     1921 cccacatgaa aatttgaaag taaggtatga agtagcaaaa tatggctgcc cgcgaacagt
     1981 tgatatggaa gaaatgtttc accctgtagt agaattgtat gatgaaaatg gatttattaa
     2041 aatagtggat gcaaatttta tcctgtggga agtgcacggc aggaatgact acatgtataa
     2101 ttctactatg cagcagaatg gttgtataaa tgaagcacag acgtgggaca ttatgataga
     2161 ggagaaccca ggcgtcccaa tggaagacat ctgggggcct cagaactata ggccttgttt
     2221 ttcttatgct attgggacgc caggagacct aagtcaacca tacgagatta taaactattc
     2281 taataaaaac gccttaaaat ggtcctcatc atatgccgca atgtatgtgt atcgcttgaa
     2341 ggtcttggat ccaaactata gcttctgtaa cctaacaacg tattttgcga ttgagagctt
     2401 aggacagatt cccagatcaa gtatctacct ggtagctgcc ttggtatttg tcctcatgct
     2461 cacattcatc agtgttctag ttctgagcta tttctggtac tcgaagattt ataggcggtt
     2521 tattattgaa ccacttcaca agcctcctgg aaaacagaag aagaattagg aaacctgaga
     2581 gtcgactccg gatacatata tgtagataga tagtagtatg catatatgta aatatattaa
     2641 gaatttacat ttgcctaata agctcatgct attattttat tcaatatctg aaaaaatata
     2701 gttaaattac ttctactaat agcatacatc acattactgt gttatttcat tttaatgata
     2761 ccatatatac tgttacattg catttaaaaa ataaacacct ttggctatta tgctgactcc
     2821 taacaatgaa agtttctgac agtgaa
//
