LOCUS       XM_039091452            2886 bp    mRNA    linear   ROD 11-JUN-2023
DEFINITION  PREDICTED: Rattus norvegicus catsper channel auxiliary subunit
            epsilon (Catspere), transcript variant X13, mRNA.
ACCESSION   XM_039091452
VERSION     XM_039091452.1
DBLINK      BioProject: PRJNA677964
KEYWORDS    RefSeq.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_051348.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_015227675.2-RS_2023_06
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.1
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 06/06/2023
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2886
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN/NHsdMcwi"
                     /db_xref="taxon:10116"
                     /chromosome="13"
                     /sex="male"
                     /tissue_type="kidney"
                     /geo_loc_name="USA: Wisconsin, Milwaukee, Medical College
                     of Wisconsin"
                     /collection_date="2019-03-08"
                     /collected_by="Rebecca Schilling"
     gene            1..2886
                     /gene="Catspere"
                     /note="catsper channel auxiliary subunit epsilon; Derived
                     by automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 3 Proteins, and 100% coverage of the annotated genomic
                     feature by RNAseq alignments, including 3 samples with
                     support for all annotated introns"
                     /db_xref="GeneID:689786"
                     /db_xref="RGD:1565309"
     CDS             177..2609
                     /gene="Catspere"
                     /codon_start=1
                     /product="cation channel sperm-associated auxiliary
                     subunit epsilon isoform X10"
                     /protein_id="XP_038947380.1"
                     /db_xref="GeneID:689786"
                     /db_xref="RGD:1565309"
                     /translation="MVLTKQMNTLGQYPVIYTLEKGLKYDPGPLTPDGTWIIHLPMTS
                     DDIIKQIRGNKVSFQDCFIASLQFLLTFPMNVISDPPEYEPLSLPAGSPLLASWHTCI
                     PTFVLLATEHETFQTNNSFQTWTKVRAPPGVLTEAQRHSLRDVILLDQRILFLVEGTI
                     YLKTKDSFKIIDENNGIAGTGILGFSKRRWCQIRYLYKLASKKSLLFAWSKDVVYAGY
                     TNLRFLVFTTISKLKDVLKLSPGDTLEIMTVEYLWHPQEVAFMLSHCTDCSTIKDVRI
                     VLFNSMHSKYVLQDFDIQVAKETQLDCRFLLSAMPDMILWDGHSTYYSHNNFTEVGII
                     ETDSGNTNLSLIAEGSKVHNVVADTTGNILVKMENNDLFYIKDGIAEIVPLSRWVNTT
                     AETALVLDKSFQVNILHYNQNLDEKYQLHLQSYPLVLELQSKNKGLEDMCPYLTFQHD
                     VHSQFYHLDKGDSLTVWTQIVYPENRGLDILVDYYGSNILTWTQNTEYEIASGFCTKS
                     MITRFFQTTNYESVKNYYDLEKKNTGLTLIKIRPSEYTRTCPTVIPVFEISVGCDPTK
                     YIQVQGFNNTRCHRRDFSYVIDKELLRDSPHENLKVRYEVAKYGCPRTVDMEEMFHPV
                     VELYDENGFIKIVDANFILWEVHGRNDYMYNSTMQQNGCINEAQTWDIMIEENPGVPM
                     EDIWGPQNYRPCFSYAIGTPGDLSQPYEIINYSNKNALKWSSSYAAMYVYRLKVLDPN
                     YSFCNLTTYFAIESLGQIPRSSIYLVAALVFVLMLTFISVLVLSYFWYSKIYRRFIIE
                     PLHKPPGKQKKN"
ORIGIN      
        1 ataccatcat tcatggtatc acacgggctg cctgtctttt tctgaggact gagtttatgc
       61 tataatcaat tgatagtatt tcaagtttcc tgaggccagt gtaaaacaat tatatacttc
      121 tctcatcatt gttgaagaga tggatccatt gtgtgcttta aggatgccct aattccatgg
      181 tactaaccaa gcagatgaac accctgggac agtatcctgt catatacaca cttgagaagg
      241 ggctgaagta cgacccaggt cccttaactc cagacggaac ctggatcatt catctaccaa
      301 tgacctcaga tgatataatc aaacagataa gaggtaacaa agtgtctttc caggactgct
      361 tcattgcatc cctccagttc ctgctgacat ttcccatgaa cgtcatttct gatcctcctg
      421 aatatgagcc actcagcctg ccagctggaa gtccgttgct ggccagctgg cacacctgca
      481 tccccacatt tgtcctcttg gccactgaac atgagacctt ccaaacgaac aattcctttc
      541 aaacctggac gaaagtaaga gcccctccag gtgtcctgac tgaagctcaa aggcacagtc
      601 tgagggatgt gatcctattg gaccaaagaa ttctgtttct cgtagaaggt accatttacc
      661 taaaaacaaa ggattcattt aaaataatag atgaaaacaa tggtattgct ggaactggaa
      721 tccttggctt ttcaaaaaga agatggtgtc agattaggta tttatacaag cttgcatcaa
      781 aaaaaagctt attgtttgct tggtcaaaag atgtagttta cgctggatat actaatctta
      841 gatttctggt attcacgact atttcaaagc taaaagatgt tctaaagctt tcccccggtg
      901 acaccctgga aataatgact gttgagtact tgtggcaccc gcaggaggtt gcttttatgc
      961 tgtcccactg cacagactgc tcgactatca aggacgttcg catagtgctg tttaattcaa
     1021 tgcattctaa atacgtgctc caggactttg acatacaagt ggccaaggag acccagttag
     1081 actgtcgctt tcttttatca gccatgccgg atatgatcct gtgggatgga cacagcactt
     1141 actatagcca caataatttc accgaagttg gaattattga gacagactca ggaaacacca
     1201 atttgtcatt aatagcagag ggcagcaaag tccacaacgt cgttgcagat actactggaa
     1261 atattttggt aaaaatggaa aataatgatt tgttctacat caaggatggc attgcagaaa
     1321 tagttccgct atcgaggtgg gtaaacacga cagcagagac agcacttgtg cttgacaaat
     1381 cttttcaagt aaatatatta cactataatc aaaatctcga cgagaagtac cagttacatc
     1441 tacagtcata tccgttggtt ctggagctac aaagtaaaaa taaaggttta gaagacatgt
     1501 gcccatatct gacatttcaa cacgatgttc acagtcagtt ttaccattta gacaaaggag
     1561 atagcctgac agtttggact caaatagtct acccagaaaa tcggggtctc gatattctcg
     1621 tggattacta tggatcaaat atattaactt ggactcaaaa cactgagtac gagattgcat
     1681 caggattctg tactaaaagt atgataacaa ggttttttca gacaaccaat tacgaatcag
     1741 taaagaatta ctatgattta gaaaaaaaga acacaggtct cacacttata aagatacgac
     1801 ctagtgaata tacaagaaca tgtccaacag tcataccggt gttcgaaatt agtgttggct
     1861 gcgaccccac taaatacatt caagtacaag gatttaataa taccagatgt catcgtcgtg
     1921 acttttctta tgtgattgac aaggaacttc tgagagatag cccacatgaa aatttgaaag
     1981 taaggtatga agtagcaaaa tatggctgcc cgcgaacagt tgatatggaa gaaatgtttc
     2041 accctgtagt agaattgtat gatgaaaatg gatttattaa aatagtggat gcaaatttta
     2101 tcctgtggga agtgcacggc aggaatgact acatgtataa ttctactatg cagcagaatg
     2161 gttgtataaa tgaagcacag acgtgggaca ttatgataga ggagaaccca ggcgtcccaa
     2221 tggaagacat ctgggggcct cagaactata ggccttgttt ttcttatgct attgggacgc
     2281 caggagacct aagtcaacca tacgagatta taaactattc taataaaaac gccttaaaat
     2341 ggtcctcatc atatgccgca atgtatgtgt atcgcttgaa ggtcttggat ccaaactata
     2401 gcttctgtaa cctaacaacg tattttgcga ttgagagctt aggacagatt cccagatcaa
     2461 gtatctacct ggtagctgcc ttggtatttg tcctcatgct cacattcatc agtgttctag
     2521 ttctgagcta tttctggtac tcgaagattt ataggcggtt tattattgaa ccacttcaca
     2581 agcctcctgg aaaacagaag aagaattagg aaacctgaga gtcgactccg gatacatata
     2641 tgtagataga tagtagtatg catatatgta aatatattaa gaatttacat ttgcctaata
     2701 agctcatgct attattttat tcaatatctg aaaaaatata gttaaattac ttctactaat
     2761 agcatacatc acattactgt gttatttcat tttaatgata ccatatatac tgttacattg
     2821 catttaaaaa ataaacacct ttggctatta tgctgactcc taacaatgaa agtttctgac
     2881 agtgaa
//
