LOCUS       XM_008762187            2005 bp    mRNA    linear   ROD 11-JUN-2023
DEFINITION  PREDICTED: Rattus norvegicus cation channel, sperm associated 2
            (Catsper2), transcript variant X2, mRNA.
ACCESSION   XM_008762187
VERSION     XM_008762187.3
DBLINK      BioProject: PRJNA677964
KEYWORDS    RefSeq.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_051338.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            [WARNING] On Feb 22, 2024 this sequence was replaced by
            XM_008762187.4.
            
            On Jan 21, 2021 this sequence version replaced XM_008762187.2.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_015227675.2-RS_2023_06
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.1
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 06/06/2023
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2005
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN/NHsdMcwi"
                     /db_xref="taxon:10116"
                     /chromosome="3"
                     /sex="male"
                     /tissue_type="kidney"
                     /geo_loc_name="USA: Wisconsin, Milwaukee, Medical College
                     of Wisconsin"
                     /collection_date="2019-03-08"
                     /collected_by="Rebecca Schilling"
     gene            1..2005
                     /gene="Catsper2"
                     /note="cation channel, sperm associated 2; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 4 ESTs, 8 Proteins, and 100% coverage of the annotated
                     genomic feature by RNAseq alignments, including 13 samples
                     with support for all annotated introns"
                     /db_xref="GeneID:366174"
                     /db_xref="RGD:1307620"
     CDS             138..1892
                     /gene="Catsper2"
                     /codon_start=1
                     /product="cation channel sperm-associated protein 2
                     isoform X1"
                     /protein_id="XP_008760409.1"
                     /db_xref="GeneID:366174"
                     /db_xref="RGD:1307620"
                     /translation="MAHERGHLQLPRADAIRSKLIDTFSLIEHLQGLSQAVPRHTLRE
                     ILDPACQKKLMLGDQEQLVRFSIRARRMGHITHAQRLLSRLRVRCGGRPPLSLWAGWV
                     LDSSIFSNFIISLIFLNTFVLMVEIELMNSTNTSLWPLKLALEVTDWFILLSFIVEIL
                     LMWLASFFLFWKNAWSVFDFVVTMLSLLPEFVVLIGVSADSVWLQLLRVSRVLRSLKL
                     FARFPQIKVILLALVRALKSMTFLLMLLLIFFYVFAVAGVYFFKEYSRSTIENLEYNM
                     FFSDLLNSLVTVFILFTLDHWYAVLQDVWKVPEASRVFSSIYVILWLLLGSIIFRNII
                     VAMMVTNFQNIRNELHEEMTHLEVQYKADIFKRRIIQRRQQSESLRGTSQGKVSEDIT
                     ETSEATDEEKSEAEESEEEKSEEEKSDVEKSDEEKNDEEKSDEEENDEEKSDVEKSDE
                     EKNDEEKGYTEKVYSGRTFVERSYAERSFAGKAENEKVQKELKEKAYPGSPPNSSSHD
                     EAFAADDTYLENLDWETLVHENLPGLMDMDQDDRVVWPRDSLFRYFELLESLQYNLEE
                     RKRLQEFAVQALMNFEDK"
ORIGIN      
        1 ccgctgcctg cgctcgcgcg tctggcccgg gcagacctgc tgccgaggtc ccaaccccct
       61 aggcctgctc gggcccgcag tgtggcagcc gccgattggc tgcgtcacgc tgcgtcgggc
      121 gggcggaacc agctgacatg gcacatgaac gaggacattt acagctgccc agagctgatg
      181 ctatccgttc aaagctcatt gacactttct cgctcataga gcatttgcag ggcttgagcc
      241 aagctgtacc aaggcacact ctccgggaga tacttgatcc ggcttgtcag aagaaactca
      301 tgttaggaga tcaggagcag ctagtgcgct tctccataag ggcgcggcgt atggggcaca
      361 ttacgcatgc ccagcggttg ctgagcagac ttcgagtgcg gtgcggtgga agaccacctc
      421 tttccttgtg ggctggatgg gttcttgaca gttctatctt ctcgaatttc atcatctccc
      481 tcatctttct gaataccttt gtgctgatgg tcgaaataga attgatgaac tccacaaata
      541 cgagtctgtg gccattgaag ctggctttgg aggtgacaga ttggtttatc ttgcttagct
      601 tcattgtaga gatccttcta atgtggttgg ccagcttttt tctcttctgg aagaatgcct
      661 ggagtgtctt tgactttgtg gttaccatgt tgtctctgct tcctgagttt gtggtgctga
      721 taggcgtctc tgcggactct gtgtggctcc aactgctaag ggtctctcgg gtgctgaggt
      781 ctctcaaact gtttgcacga ttccctcaaa ttaaagttat tcttttggct ctcgtcaggg
      841 ccctgaagag catgacattc ctgttgatgt tgctgcttat cttcttctac gtcttcgctg
      901 tggccggtgt ctacttcttc aaagaatatt cccgttcaac tatcgagaat ctggagtaca
      961 acatgttctt ctcggaccta ctaaattccc tggtgacagt gttcatcctc ttcaccttgg
     1021 atcattggta tgcagtactt caggacgtct ggaaggtgcc agaagctagc cgtgtcttta
     1081 gcagcatcta tgtgatcctt tggttgttgc ttggttccat tatctttcga aacatcatag
     1141 tagccatgat ggttactaac tttcagaata tccgaaatga gctgcatgag gagatgactc
     1201 acctggaggt tcagtataag gctgacatat tcaagcgacg gattatccag aggagacaac
     1261 aatctgagtc actaagagga accagtcaag gaaaggtctc cgaagacata acagaaactt
     1321 ccgaggccac tgatgaggaa aaaagcgaag ctgaggaaag cgaggaagag aaaagcgagg
     1381 aagagaaaag tgatgtagag aaaagcgatg aagagaaaaa cgatgaagag aaaagtgatg
     1441 aagaggaaaa cgatgaagag aaaagtgatg tagagaaaag cgatgaagag aaaaacgatg
     1501 aagagaaagg gtataccgag aaagtgtatt ccggaagaac ctttgtggag agaagttatg
     1561 ctgagagaag ctttgctgga aaggctgaaa atgaaaaagt acaaaaagag ttgaaagaaa
     1621 aggcctaccc gggttctcct cccaactctt catcccatga tgaagccttt gcagccgatg
     1681 atacttacct tgaaaacctg gactgggaga ctcttgtgca tgagaacctg cctgggctaa
     1741 tggatatgga tcaggatgac cgtgttgttt ggcccagaga ttcgcttttc cgatattttg
     1801 agttactgga aagccttcag tataacctag aggagcgcaa gaggttgcaa gaatttgcag
     1861 ttcaagcact gatgaatttt gaagacaagt gaaggcacag tgtatgacac ctgtgtcttt
     1921 ggagccagca aaagctaatg atgaaaataa ttagaattta aaatataaat atctaataaa
     1981 tactgctaat gaatatttct gtaaa
//
