LOCUS       XM_039098217            4757 bp    mRNA    linear   ROD 11-JUN-2023
DEFINITION  PREDICTED: Rattus norvegicus capping protein regulator and myosin 1
            linker 2 (Carmil2), transcript variant X1, mRNA.
ACCESSION   XM_039098217
VERSION     XM_039098217.1
DBLINK      BioProject: PRJNA677964
KEYWORDS    RefSeq.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_051354.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_015227675.2-RS_2023_06
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.1
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 06/06/2023
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4757
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN/NHsdMcwi"
                     /db_xref="taxon:10116"
                     /chromosome="19"
                     /sex="male"
                     /tissue_type="kidney"
                     /geo_loc_name="USA: Wisconsin, Milwaukee, Medical College
                     of Wisconsin"
                     /collection_date="2019-03-08"
                     /collected_by="Rebecca Schilling"
     gene            1..4757
                     /gene="Carmil2"
                     /note="capping protein regulator and myosin 1 linker 2;
                     Derived by automated computational analysis using gene
                     prediction method: Gnomon. Supporting evidence includes
                     similarity to: 3 ESTs, 2 Proteins, and 100% coverage of
                     the annotated genomic feature by RNAseq alignments,
                     including 12 samples with support for all annotated
                     introns"
                     /db_xref="GeneID:307797"
                     /db_xref="RGD:1562390"
     CDS             347..4705
                     /gene="Carmil2"
                     /codon_start=1
                     /product="capping protein, Arp2/3 and myosin-I linker
                     protein 2 isoform X1"
                     /protein_id="XP_038954145.1"
                     /db_xref="GeneID:307797"
                     /db_xref="RGD:1562390"
                     /translation="MSTRKEKSLRDSSSEDSTVLPQHPTRRNSANEAGAGRGRAGGGL
                     AGSSAYLPLQEEQVAAVLPGPLASCVRSCRLLFPARAHWAVSALWLTPQMAYPVNCEA
                     LLRWRAYLLHTCLPLRVDCTFSYLEVQAMALQETPPRVTFELESLPKLVLEFPGVAAL
                     EQLAQHVAAAIKKVFPRSTLGKLFRKPTPSSLLARLEKSHPLESTVPSSPCGGFLETY
                     EALCDYNGFPFREEIQWDVDTIYHRQGCRHFCLGDFSHLGSRDLALSVAALSYNLWFR
                     RLSCMDMKLSLEVSEQILHMTSQSSYLEELVLETCGLRGDFVRRLAQALAGHFNSGLR
                     ELSLSGNLLDDRGMATLSRHLEHCPGALRKLCLAQTGLTPRGMRALGRALATNATFDS
                     TLTHLDLSGNPGALGASQDGGGLYTFLSRPNVLAYLNLAGTDTALGMLFMALSGGCCA
                     NLTHLEASRNIFSRTKSQAVPDALQRFLGGARMLRHLGLAGCKLPPEALRALLDGLAL
                     NTQIHDLHLDLSACELRSVGAQVIQDLVCDAGALSSLDLSDNGFGSDMVTLVLAIGRS
                     RSLKHVALGRNFNVRCKETLDDVLHRIVQLMQDDDCPLQSLSVAESRLKQGASVLIRA
                     LGTNPKLSVLDISGNAIGDTGAKMLAKALRVNTRLRSVIWDRNNTSALGLLDVAEALE
                     QNHSLKSMPLPLNDITQAHRSRPELTARAVHQIQACLWRNNRADSTSDRKPCLQPLGL
                     ISDHSEQVNELCQSVQEHVELLGCGAGPQGEVAVHQAEDAIQNANFSLSILPILFEAG
                     SSPSHHWQLQQKLEGLLGQVGEICRQDIQDFTQTTLDTTRSLCPQMLQRPGWRKQLEG
                     VLVGSGGLPELLPEHLLQDALTRLRDMRLSITGTLAENIVAQALAGLHAARDRLVESL
                     AQQAPVTVVPAVPPLCGDELTLLESGGVEEFFFPTEEEEEREKDDGSSWKWLEPSNCF
                     LVPSLHGAAEEAERDPELAAPGEDAEPQAGPSARGSPSPAAPGPPAGPLPRMDLPPAG
                     QPLRHPTRARPRPRRQHHHRPPPGGPQVSPALLQEGNGLTARVDEGVEEFFSKRLIQQ
                     DRLWAPEEDTATEGGTTPVPRTLRKKLGTLFAFKKPRSTRGPRPDLETSPGAAARARK
                     TTLGDLLRPPARPGRGEEPGGAEGGTSSPDAARRNRPRYTRESKAYSMILLPAEEEAA
                     VGARPDKRRPLERGDTELAPSFEQRVQVVLQRIGVSRGSGGAESKRKQSKDGEIKKAG
                     SDGDIMDSSTETPPISIKSRTHSVSADPSCRPGPGGQGPESATWKTLGQQLNAELRGR
                     GWGQQDGPGPPSPCPSPSPRRTSPAPDILSLPEDPCLGPRNEDGQLRPRPLSAGRRAV
                     SVHEDQLQAPAERPLRLQRSPVLKRRPKLEAPPPPNLGSGLGTKPLPPYPTEPSSPEQ
                     SPPSPATDQRGGGPNP"
ORIGIN      
        1 tgtcttcctg attgttttta cagttgctag gattacaaat aggttgccag acttttaaat
       61 tcgcatctga gcagggcaga cagaaccttg ggtgtgaacc tttggtgttg ggtaattctt
      121 actgaagaca gacacctatt ctggtttcct ttgagtgcct acaccaccta ccgaacccgt
      181 gtcttgggac agaccaaatt gggcctttgg aatcccctgg agggtggcgt cccctggtgt
      241 tcgcgtcagg gactacgggg cagggtaaaa gtagggcacc aggacctgca agaggcaagc
      301 atgaaaaggc aagaagaccc tttcccctac accattcacc acacccatga gtacccggaa
      361 ggaaaagtcc ctgagagata gcagcagtga agattctacc gtcctcccac aacatccaac
      421 ccggaggaac tcagccaacg aagccggggc ggggaggggc cgggccgggg gcggcctggc
      481 aggaagcagc gcgtaccttc cgctgcagga ggagcaggtg gctgcagtgc tgcctgggcc
      541 cctggcttcc tgtgtacgct cctgccggct gctttttccc gccagagctc attgggccgt
      601 ctcggcccta tggctcacac cccagatggc atatcctgtg aactgcgagg cactgcttcg
      661 atggagggca tatttgctgc acacttgcct tcccctgagg gtggactgca cattcagcta
      721 cctggaggtc caggccatgg ctctgcagga gacacctcct cgggtcacct ttgaactgga
      781 gtccctgcct aaactggtcc tggagtttcc cggggtggcc gccctagaac agctagctca
      841 gcatgtggct gctgccatca aaaaggtctt ccctcgctca acccttggga agctattccg
      901 gaagcccacg ccctcatcgc tgttggctcg actggagaaa agccatccct tagagtctac
      961 agtacccagc agtccttgtg gtggcttctt ggagacatat gaagctctct gtgactacaa
     1021 tggcttccca ttccgagagg agattcagtg ggatgtggac actatctacc atcgccaggg
     1081 ctgccgccat ttctgccttg gagatttcag ccaccttggc agccgagacc tggccttgag
     1141 tgtagctgcc ttatcttata acctgtggtt ccggcgactc tcctgcatgg acatgaagct
     1201 gagcctggag gtctcagaac agatcctgca catgacgagt cagtcttcct atttggagga
     1261 gctggtactg gagacctgcg gcctgagagg agacttcgtt aggcgattag cccaggcact
     1321 ggcaggacat tttaattctg gacttcggga gctcagcctg tctgggaact tgctggatga
     1381 tagaggtatg gccacactca gcagacacct agagcattgt ccaggagcct tgaggaaact
     1441 ctgcctagca cagacggggt tgacacctcg aggaatgaga gctctaggaa gggcactggc
     1501 aacgaatgcc acctttgact ctaccctgac ccacctggat ctttctggga accctggggc
     1561 actgggagcc tcacaggatg gtgggggcct gtatactttc ctgagtcgtc ctaatgttct
     1621 ggcctatttg aatctagcag gcaccgacac tgctctaggc atgcttttca tggcgttatc
     1681 tggtggctgc tgcgccaacc tcacccatct cgaagcttcg aggaatatct tctctcgcac
     1741 gaagtcccaa gcggtgccag acgcactgca gcgcttcctt ggtggtgcca ggatgctgcg
     1801 gcatctaggc ctggctggct gcaagctgcc acccgaagcg ctcagggccc ttctagatgg
     1861 tcttgcgctc aacactcaga ttcatgacct gcacctagat ctcagcgcat gtgagctgcg
     1921 ctccgtgggt gcccaggtga tacaagactt agtttgtgat gcgggcgcct tgagttcctt
     1981 ggatctgtca gataatggct ttggctccga catggtgacc ctggtgctgg ccatcgggag
     2041 gagccgttct ctgaaacatg tggcccttgg aaggaacttc aatgttcgct gcaaggagac
     2101 actggatgac gtcctgcacc ggatagtcca gctcatgcag gatgatgact gtcctttgca
     2161 gtctctatcc gtggctgagt cgcgcttgaa gcagggtgcc agcgtcctga ttcgggcttt
     2221 gggcaccaat cctaaactgt cagtgctgga tatcagtggc aatgccatag gagatactgg
     2281 cgccaagatg ctagccaagg ctctacgagt caacaccagg ctacggtctg tgatctggga
     2341 tcgaaacaac acatctgctc tgggcctgct ggatgtggcg gaagccctgg aacagaacca
     2401 cagcctgaag tccatgccgc tgccactaaa tgacataaca caggcacatc gcagccggcc
     2461 agaactgaca gcccgagcag ttcatcagat ccaagcctgt ctctggagga acaaccgggc
     2521 agactctact tctgaccgga agccctgcct tcagcccttg ggtctgattt cagaccactc
     2581 agagcaggtg aatgagctat gccagtcagt acaggagcat gtggagctgc tgggctgtgg
     2641 ggctgggccc cagggtgagg ttgctgtgca ccaggctgag gacgccatcc agaatgccaa
     2701 cttctctctt agtatccttc ccattctatt tgaggctggg agctctccaa gccaccactg
     2761 gcagctgcaa cagaagctgg aaggcctctt gggtcaggtg ggcgagatct gccgccagga
     2821 catccaggac ttcactcaga ccacactgga taccacaagg agcctctgcc cacagatgct
     2881 gcagagacct ggctggagga agcagctgga gggagttctg gtgggctccg ggggcctccc
     2941 agaactgctt ccagaacatc tgctacaaga tgccttaact aggctgaggg acatgcgcct
     3001 gtcaatcaca gggaccctag cagagaacat tgtggctcag gcccttgcag gtcttcatgc
     3061 agcccgagat cgactggtgg agagtctagc tcagcaggca ccagtgacgg tggtccctgc
     3121 tgtaccacca ctgtgtggag atgagctcac cctccttgag tctgggggag tggaagagtt
     3181 tttctttccc acggaggagg aagaggagag agaaaaggat gatggttcct catggaaatg
     3241 gcttgagccc agtaattgct tcctggtccc gtcccttcat ggtgctgctg aggaagcaga
     3301 acgggacccc gagctggcag ctccggggga agatgcggag ccgcaggctg ggccgtctgc
     3361 acgcggctct ccaagccccg ccgccccagg gcctcccgcc ggccctctgc ctcgcatgga
     3421 cctgccaccc gccgggcaac ccctacgcca tccgacccga gcccgaccga ggccacgtcg
     3481 ccagcaccac caccgcccgc cgccgggggg cccccaggtg tccccagccc tacttcaaga
     3541 agggaatggg ctcactgctc gtgtcgatga gggtgtggag gaattcttct ccaaaaggct
     3601 gatccagcag gatcgcctct gggcccctga ggaggataca gccactgagg gtggtaccac
     3661 tcctgttccc cgtacacttc gaaagaagct gggtaccctc tttgccttta agaaacctcg
     3721 ttcaacaagg ggtccacgac ctgacctaga gaccagccct ggagcagcag ctcgtgccag
     3781 aaagaccaca cttggggatc tgcttcgacc accagcccgt ccaggccgtg gtgaggagcc
     3841 tggaggagca gaaggcggca ccagtagccc tgatgcggct cgcagaaatc ggcctcgtta
     3901 cactcgggaa agcaaggcct attccatgat actgctgcct gctgaggagg aagcggcagt
     3961 gggtgccaga cctgataaga ggcggcctct ggaacgggga gacacagaac tggccccatc
     4021 ttttgagcag cgggtacaag tggtgctgca gaggatcggc gtaagccggg gcagtggggg
     4081 tgctgaaagc aagaggaagc aaagcaagga tggtgagatc aagaaagcag gctctgatgg
     4141 tgacattatg gacagttcca cagagacccc tcccatctca atcaagtccc gcacccactc
     4201 tgtatctgct gatccctcat gtagacctgg gccaggaggc caggggcctg agtctgccac
     4261 ctggaagaca ctggggcagc agctgaatgc agagctcaga ggccgtggtt ggggccaaca
     4321 ggatggtcca gggcccccct ctccatgtcc cagcccaagt ccccgaagaa ccagccctgc
     4381 cccagacatc ctgagtctcc cagaggaccc ctgcttgggc cctaggaatg aagatggcca
     4441 gctgaggccg aggcctctct cggcaggccg gcgagcagtg tctgtgcatg aggaccagct
     4501 ccaggcccct gcggaacggc cccttcggct gcagcgctcc cctgtcctca agcgtaggcc
     4561 aaagctcgag gcacccccac ccccaaactt aggctccggc cttggaacca agcctcttcc
     4621 tccatacccc acagaaccct ccagccctga gcagagccct ccctccccag ccacagacca
     4681 aagaggcggc ggccccaacc cttgatcctc tcttctcctg ccgcatgaaa ttattttatt
     4741 aaaaaacctg aatgaaa
//
