LOCUS       NM_001419150             808 bp    mRNA    linear   ROD 03-APR-2024
DEFINITION  Rattus norvegicus caspase recruitment domain family, member 19
            (Card19), transcript variant 1, mRNA.
ACCESSION   NM_001419150 XM_006253730
VERSION     NM_001419150.1
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
REFERENCE   1  (bases 1 to 808)
  AUTHORS   Gaudet,P., Livstone,M.S., Lewis,S.E. and Thomas,P.D.
  TITLE     Phylogenetic-based propagation of functional annotations within the
            Gene Ontology consortium
  JOURNAL   Brief Bioinform 12 (5), 449-462 (2011)
   PUBMED   21873635
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            JAXUCZ010000017.1.
            
            On Mar 28, 2023 this sequence version replaced XM_006253730.4.
            
            ##Evidence-Data-START##
            Transcript exon combination :: SRR26643429.51935.1,
                                           SRR26643299.60337.1 [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMEA5760383, SAMEA5760386
                                           [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on manual assertion, conservation,
                                      expression
            ##RefSeq-Attributes-END##
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-90                JAXUCZ010000017.1  15639035-15639124
            91-233              JAXUCZ010000017.1  15646998-15647140
            234-387             JAXUCZ010000017.1  15649504-15649657
            388-447             JAXUCZ010000017.1  15650655-15650714
            448-519             JAXUCZ010000017.1  15650874-15650945
            520-808             JAXUCZ010000017.1  15651432-15651720
FEATURES             Location/Qualifiers
     source          1..808
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN"
                     /db_xref="taxon:10116"
                     /chromosome="17"
                     /map="17p14"
     gene            1..808
                     /gene="Card19"
                     /gene_synonym="Bincard; RGD1306058"
                     /note="caspase recruitment domain family, member 19"
                     /db_xref="GeneID:361224"
                     /db_xref="RGD:1306058"
     exon            1..90
                     /gene="Card19"
                     /gene_synonym="Bincard; RGD1306058"
                     /inference="alignment:Splign:2.1.0"
     CDS             84..635
                     /gene="Card19"
                     /gene_synonym="Bincard; RGD1306058"
                     /note="isoform 1 is encoded by transcript variant 1;
                     Bcl10-interacting protein with Card; bcl10-interacting
                     CARD protein; caspase recruitment domain-containing
                     protein 19"
                     /codon_start=1
                     /product="caspase recruitment domain-containing protein 19
                     isoform 1"
                     /protein_id="NP_001406079.1"
                     /db_xref="GeneID:361224"
                     /db_xref="RGD:1306058"
                     /translation="MTDQTYCDRLVQDTPFLTGQGRLSEQQVDRIILQLNRYYPQILT
                     NKEAEKFRNPKASLHIRLCDLLSHLQQRGERHCQEFYRALYIHAQPLHSHLPSRYTPH
                     NSDCRELDWGIERRELSDRGPMSFLAGLGLAAGLALLLYCCPPDPKVLPGTRRVLAFS
                     PVIIDRHASRYLLAFLADDFGGL"
     exon            91..233
                     /gene="Card19"
                     /gene_synonym="Bincard; RGD1306058"
                     /inference="alignment:Splign:2.1.0"
     exon            234..387
                     /gene="Card19"
                     /gene_synonym="Bincard; RGD1306058"
                     /inference="alignment:Splign:2.1.0"
     exon            388..447
                     /gene="Card19"
                     /gene_synonym="Bincard; RGD1306058"
                     /inference="alignment:Splign:2.1.0"
     exon            448..519
                     /gene="Card19"
                     /gene_synonym="Bincard; RGD1306058"
                     /inference="alignment:Splign:2.1.0"
     exon            520..808
                     /gene="Card19"
                     /gene_synonym="Bincard; RGD1306058"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 aggcctgcgg gcggcggtca gcggagccct cggtccgggc ggcggacagc cgaggacgac
       61 ggggcggcgc cgtgtcctcc gccatgacag atcagaccta ctgtgaccgg ctggtacagg
      121 acactccttt cctgacagga cagggtcgcc tgagtgagca acaagtagac aggatcatcc
      181 tccagctgaa ccgttactac ccacaaatcc ttaccaacaa ggaggctgaa aagttccgga
      241 accccaaggc atccctgcac atacggctct gtgacctcct gagccaccta cagcagcgtg
      301 gggaacggca ctgtcaggaa ttttaccgag cactgtacat ccatgcccag cccctgcaca
      361 gccacctgcc cagccgctac actcctcaca actcagattg cagagagctg gactggggca
      421 tcgagaggcg tgagctgagt gacaggggac ccatgagctt cctggcaggc ctgggtctgg
      481 cagcgggcct ggccctcctc ctctactgct gtccaccaga ccctaaagtg ctgcccggga
      541 cccgtcgcgt ccttgccttc tcccccgtca tcattgaccg gcacgccagc cgctacctgt
      601 tggccttcct ggcagatgac ttcggaggac tttgacgatc acacaccctg ggccttacct
      661 gctgtttaac caaagaatcc cctggctgcc cactgtgggg cccatacttc ttttctaaat
      721 acttattttt cattatttat gatttctacg agaacacatc accttcactg tataaggtgc
      781 ttaatattaa atgccaggtg catctgcc
//
