LOCUS       XM_039087518            5720 bp    mRNA    linear   ROD 11-JUN-2023
DEFINITION  PREDICTED: Rattus norvegicus caspase recruitment domain family,
            member 14 (Card14), transcript variant X1, mRNA.
ACCESSION   XM_039087518
VERSION     XM_039087518.1
DBLINK      BioProject: PRJNA677964
KEYWORDS    RefSeq.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_051345.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_015227675.2-RS_2023_06
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.1
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 06/06/2023
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5720
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN/NHsdMcwi"
                     /db_xref="taxon:10116"
                     /chromosome="10"
                     /sex="male"
                     /tissue_type="kidney"
                     /geo_loc_name="USA: Wisconsin, Milwaukee, Medical College
                     of Wisconsin"
                     /collection_date="2019-03-08"
                     /collected_by="Rebecca Schilling"
     gene            1..5720
                     /gene="Card14"
                     /note="caspase recruitment domain family, member 14;
                     Derived by automated computational analysis using gene
                     prediction method: Gnomon. Supporting evidence includes
                     similarity to: 11 ESTs, and 100% coverage of the annotated
                     genomic feature by RNAseq alignments, including 5 samples
                     with support for all annotated introns"
                     /db_xref="GeneID:688292"
                     /db_xref="RGD:1591135"
     CDS             1888..5019
                     /gene="Card14"
                     /codon_start=1
                     /product="caspase recruitment domain-containing protein 14
                     isoform X1"
                     /protein_id="XP_038943446.1"
                     /db_xref="GeneID:688292"
                     /db_xref="RGD:1591135"
                     /translation="MAELCRMDSTLTALDEELLWDMLESHRCRIVQSICPSRLTPYLR
                     QAKVLGQLDEEEILHSSRFTNSAMRVGHLLDLLKARGKNGAIAFLESLKFHNPDVYTL
                     VTGLQSDIDFSTFSGLMETSKLTECLAGAISSLQEELAQEKAQKEVLLRRCQQLKERL
                     GLAEAHAEGLRQLEVDHGRMKREVSTHFHEVLKLKDEMLNLSLHYSNALREKELAATR
                     CHSLQEELYLVKQELQRASLVSSCERESLERSLKMASDLEPEGEELNRLKEENEKLRS
                     MTFSLTGFELRILLSQYPGMIDLHHQVEKDILEQSLDEARESKQELVDRIHSLRERAV
                     AAERQQKQYWEEKEQTLLQFRKTQVDCELYKEKMTMLQGQVAELQKERDQAYTARDRA
                     QMEISQRLVEKDALRRRVFELTEQVCELRTQLRRLQAEAPGGPKQEAGNREICLRGKQ
                     RLVRMHAVCPPDDSDCSFLSSTESRLWWDLNSTSSREQMDSFRSSSPMPPSQQSLYKR
                     VAEDFLEDPESLSLPEVLEVRLQGATLDDTDTDLEFEMLDGADLSQTEDSLQGSSRSL
                     NVSESSVPVRRRPARKILSQVTVLAFQGDALLEQIGVIGGNLTGIFIHRVTPGSAADE
                     MALRPGTQIMMVDYKPTKPSLRATLENTTLEQAVGLLRRVNGSCYLSVKINTEGYKNL
                     IQDLDAKVVTSGDSFYIRVNMAMQRRGEGELHAHCNDILHVTDTMFQGRSCWHAHHVN
                     PYTMKDMEPGTIPNYSQAQQQLLALIQDMTQRCTVARKVGHLVLLGHRTPFTLSTHLS
                     LSKPPGGPQKLVRIVSVDKAAVSPLTSSFDQGQEDSGKEEGGPSVCFWPENCFTLAPY
                     TLVHPHRPAWPRPVLFVPRVIGKILGKKLCLLQGFKQCSAEYLSQEEYVTWSQRGDII
                     QEGESIGDHHCVTRHAVQSLMNTSTHALLDVRLDSVRVLHKMDIFPIIIHVSVNEKTA
                     KKLRKGLHRLGSSEEQFLEVARQEEGELDRVPCLYSSLAPDNWSDLDSLLNCVRLAIA
                     DEQKKVVWTEGPC"
ORIGIN      
        1 gcatgaggaa gttcaaggga agggtgttca tggagcccga ttgctgacca ggctgtgaaa
       61 taaccatgac acctgcttgt cctctctaga gtggcatggt tctcaggctt catccagaac
      121 ctgcttcctc taaggaaccg aggaaggcgt gagtcagagg tgtctgcatc aacttctgaa
      181 cccggtcttt tattgtttct cttccctctc gctatagtct ttggcgctgg actttgagtt
      241 ttggagcagg tcacatggtt tgaaataact tcacagccct tcccgtctgg ccctgcccac
      301 cgcagcctgt ggagaaagag ccattggcag tgcaccagcc agactgggag acaccagact
      361 ccagccagct acaaggaggc cccgaagaag caactctggg cacctctggt gagtaacttg
      421 ttggagccct cttgttgctg tgaagaaaca ggtcacctga gctcgtagtt taggggatcg
      481 gtctttcact tgtgggatgc gtgccggggg ggggggacaa gatccgctca cactgtatcc
      541 acagacagga agcagagaga tgcagccggc ctccccgtct tcactcagtc tgggatggca
      601 gcccacagac acgtatggag atttaatttt tagacgagtc tgagttcagt caagcccgtg
      661 atcaagatta gctgtctcag gtggactggg agttgttcac agagacagga catcccagcc
      721 atcactttct gtttgttata aaccaccaag cttgacttga tatggtttgg gggcatctgc
      781 ggagcacagc acagggccag atgaaaagaa tcagaaccgt ggcgctctgt gaacctgagt
      841 ctgctcctac ctgtgcttgg agactcacag ggatgtcggc agggctgtat gtgcgatgca
      901 gaaacctaga gtggccagcg ttcatccacg gagtatcggc tttaagcgca tggtgctcat
      961 ggtttgatct tccacagagg cagaagccgg ctactgcagt cactgtagca accattataa
     1021 aatggctaaa gactgggagg ggtcctctga agtggggagc ccttcccagc tccctccttg
     1081 gtctgaaagc tggtggcttt ttgcttgcgt gacaagaccc aggctgtgca taccttttat
     1141 gcagccaccg tgagcctccc tctgctccag actggccaaa tcagtcctgg gtaagcactc
     1201 tggccagccc tgtccccatg agatcctttc tgcccttaga acagcagcag taccaccagc
     1261 tgctggacac agtgtccaac tctaaagttg gctccaggac agtttcttaa ccttacttcc
     1321 ttttctcccc actttgtgtg tgtgtgtgtg tgtgtgtgtg cgtgcatgtg tgtgtatgtt
     1381 tgccatgcat gtgtgtgtgt gcatgtgtgt gcgtgtgcat gcatgtgtgt atgtttgcca
     1441 tgcatatgtg tgtgtgcata tgtactcatg tgtgtgcatg tgtgttgctg aggatggaac
     1501 ctacgcccag cacctcagca gtgctgggta aatactggag cttgtgctcc cagatcctga
     1561 ccagctttta ttgtcacctt gggttagtga agtccccggg ccatgagcag tgatgactaa
     1621 tgtggtttac tgacaccagg tgaggctctc tgcctgccag aggtaagggg tgggggtggg
     1681 gacagggagt gggaagtgag cctagcattg ctacagggtg ttcctgcatt gccacagggt
     1741 gttcctctga ctccctgagt tggatgttgt tcctccacca gcagtgtgga gcaaagaagg
     1801 ctagagcaga aaaactccct ggcctcggtc gaacgcccga gcacagtctt cgattgcacc
     1861 cctatcctgg cctctcggag tccaggtatg gccgaactgt gccgcatgga ttccacgctg
     1921 actgctctgg acgaggagct gctctgggat atgctggaga gtcaccgatg caggatcgtg
     1981 cagagcatct gtcccagccg gctcaccccc tacctgcgcc aggccaaggt gctgggccag
     2041 ctggacgagg aggagatcct ccacagctcc cgcttcacca acagtgccat gagagttggg
     2101 cacttgctgg atctgctgaa ggcccgaggg aagaacggag ccattgcctt cctggaaagc
     2161 ctgaagttcc acaaccctga tgtctacacc ctggtcactg ggctacagtc tgacattgac
     2221 ttcagcacct tcagcggtct catggagaca tccaagctga ccgagtgtct ggccggggcc
     2281 atcagcagcc tgcaggagga gctggcccag gagaaggcac agaaggaggt tctgctccgg
     2341 agatgccaac agctgaagga acgcctgggc ttggctgagg cccacgcaga gggtctgcgc
     2401 cagctggagg ttgaccacgg acgcatgaaa cgtgaggtca gcacccactt ccacgaggtc
     2461 ctgaagctga aggacgagat gctgaacctg tcactgcact acagcaacgc gcttcgggag
     2521 aaggagctgg cagccacacg ctgccacagc ctgcaggagg agctctacct ggtgaagcag
     2581 gaactccagc gggcaagcct tgtatcttca tgtgaaagag aatctctaga gaggtccctg
     2641 aaaatggcca gcgacctgga gcctgaagga gaggaactga atcggcttaa ggaagagaac
     2701 gagaagctcc gctcgatgac cttcagcctg acaggctttg aactcaggat cctcctgtct
     2761 cagtatcctg gcatgataga cctgcaccac caggtggaga aggacattct agaacagagc
     2821 ctggatgagg cccgggagag caagcaagag ctggtggatc gtatccactc actgcgggag
     2881 agagcagtgg ccgcggagag gcagcagaag cagtactggg aggagaagga acagacccta
     2941 ctccagttcc ggaagaccca ggtggactgt gaactataca aagagaagat gaccatgctt
     3001 cagggccagg tggctgagct gcagaaggaa cgtgaccagg cgtacacagc aagggacagg
     3061 gcccagatgg agatttctca gcgcctggtg gagaaggatg cccttcgcag aagagtgttc
     3121 gagctgacgg agcaggtctg cgagcttcgt acccagctgc gccggctgca ggctgaggcc
     3181 ccaggaggac ccaagcagga agctggaaac agggaaatct gcctccgggg gaagcagcgg
     3241 cttgtgagga tgcatgctgt gtgcccacca gatgacagtg actgcagctt cctcagctcc
     3301 accgagtccc ggctgtggtg ggacctgaat tccacatcca gccgggagca gatggacagc
     3361 ttccgctcca gcagccccat gcctcccagc cagcagtccc tctacaaacg ggtggcagag
     3421 gattttctgg aagaccctga gtctctaagc ctcccagaag tcctcgaggt gcgccttcaa
     3481 ggggctacgc tggacgacac agacacagac ctggagtttg agatgttaga cggagccgac
     3541 ctctctcaga cagaggacag cctgcagggg tcttccagaa gcctgaatgt ctcagaaagc
     3601 agcgtccctg tgaggcggag gccagcccgc aagatcctaa gccaggtcac agtgctggcg
     3661 ttccaagggg acgcgttgct ggagcagatc ggtgtcattg gcgggaacct cacagggatc
     3721 ttcattcacc gtgtcacccc tggctccgca gcagatgaaa tggccctgcg acccggtacc
     3781 cagatcatga tggtggacta caaacctacc aagccatcat taagggccac tctggagaat
     3841 acaaccctgg agcaggctgt gggccttctc cggagggtga atggttcctg ctacctgtct
     3901 gtgaagatca acactgaagg ttataagaac ctcatccagg acctagatgc caaagtggta
     3961 acatctggtg attcgtttta catccgggtc aacatggcca tgcagaggag aggggaggga
     4021 gagttgcatg ctcactgcaa tgatattctg catgtcaccg acaccatgtt ccaaggccgc
     4081 agttgctggc atgctcatca tgtgaacccc tacaccatga aagacatgga gcccggcacc
     4141 atccctaact attcacaggc tcagcagcag ctcctggccc tcatccagga catgactcaa
     4201 cggtgcacag tcgcccgcaa ggtcgggcac cttgttctct tgggacacag aacacctttc
     4261 actctgagca cccatctgtc cctgagcaag cctcccggag gaccacagaa gttagtgcgg
     4321 attgtcagcg tggacaaagc ggccgtcagt cctctgactt catcctttga ccaaggccag
     4381 gaggattctg gcaaggagga aggtggtccc agcgtgtgct tctggccaga aaactgcttt
     4441 accctggcac cttacaccct ggtgcacccc cataggcctg cgtggccccg gcctgtgctg
     4501 ttcgtgccca gagtaattgg gaagatcctg ggcaaaaagc tgtgtctcct ccaaggtttt
     4561 aagcagtgtt cagcagagta cttgagccag gaggagtatg tcacctggag tcagagaggg
     4621 gacatcatcc aggagggaga gtcaataggt gaccaccact gtgtcacccg gcatgccgtg
     4681 cagtccctca tgaatacgag cacccatgcc ctgctggatg tccggctgga cagcgtccga
     4741 gtcttacaca agatggacat atttcccatc atcatccacg tttctgtcaa tgagaagacg
     4801 gcaaagaaac tcaggaaagg cctacatcgg cttggcagct cagaggagca gttcctggag
     4861 gtggcccggc aggaagaggg ggaactggac agagtgccct gtctgtacag cagcctggcc
     4921 cccgacaact ggagtgatct ggacagcctg ctcaactgtg tgcgcctggc cattgcggat
     4981 gagcagaaga aggtggtgtg gacagagggc ccctgctgaa gcccacacct ggcctgggac
     5041 tgtggggacc tccatgtgtc tcttaatgcc gtcagcaaac agccctactt ccttctctgg
     5101 tcagggtctg gcctcaggtg ctcacagaaa tcaaggcgaa aatgatgaag caccttccca
     5161 cagcacggcc tgggctgatg gaggaccgga gaatattcgg ccatgtgggg gtgtttcctg
     5221 agacctgctc agagccagca ctccaacctt ctgtggtaac aggaccaggt cgtgggtctg
     5281 tccctctttt tatgtttccg atgtcaagtg aaccctggag ggtcactgga gcaatcctca
     5341 ccgcccaggg tggggcactg actggagcgc tgtgggcgtg actgactcag ctaccacaga
     5401 caccagcaaa ggaagctgct gtagtggaca gacttgagcg gctctttgac tcactgctct
     5461 gtgcccggcc ccaaacacca ggttgctttg gtacatatcc tggagccaac tgaccaaccc
     5521 tttgtgagca aagaactcat tcttgaactg acattatccc ctggtccttc tcgggatgta
     5581 tcacgccaca cttgggtgaa gcccccaccc agccataaac tgagtcagtt gacagggtgt
     5641 ttgtgtctcg gtgccagaga cccagtgtgc tcctacgatg ttctgtgaat gattatactg
     5701 ttgtaaaaag gttttcccaa
//
