LOCUS       NM_001134993            1982 bp    mRNA    linear   ROD 21-MAR-2023
DEFINITION  Rattus norvegicus carbonic anhydrase 13 (Car13), mRNA.
ACCESSION   NM_001134993 XM_001053915 XM_574890
VERSION     NM_001134993.1
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
REFERENCE   1  (bases 1 to 1982)
  AUTHORS   Reibring CG, El Shahawy M, Hallberg K, Kannius-Janson M, Nilsson J,
            Parkkila S, Sly WS, Waheed A, Linde A and Gritli-Linde A.
  TITLE     Expression patterns and subcellular localization of carbonic
            anhydrases are developmentally regulated during tooth formation
  JOURNAL   PLoS One 9 (5), e96007 (2014)
   PUBMED   24789143
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1982)
  AUTHORS   Florea L, Di Francesco V, Miller J, Turner R, Yao A, Harris M,
            Walenz B, Mobarry C, Merkulov GV, Charlab R, Dew I, Deng Z, Istrail
            S, Li P and Sutton G.
  TITLE     Gene and alternative splicing annotation with AIR
  JOURNAL   Genome Res 15 (1), 54-66 (2005)
   PUBMED   15632090
REFERENCE   3  (bases 1 to 1982)
  AUTHORS   Lehtonen J, Shen B, Vihinen M, Casini A, Scozzafava A, Supuran CT,
            Parkkila AK, Saarnio J, Kivela AJ, Waheed A, Sly WS and Parkkila S.
  TITLE     Characterization of CA XIII, a novel member of the carbonic
            anhydrase isozyme family
  JOURNAL   J Biol Chem 279 (4), 2719-2727 (2004)
   PUBMED   14600151
COMMENT     PROVISIONAL REFSEQ: This record has not yet been subject to final
            NCBI review. The reference sequence was derived from CH473961.1.
            
            On or before Sep 17, 2008 this sequence version replaced
            XM_574890.2, XM_001053915.1.
            
            ##Evidence-Data-START##
            Transcript exon combination :: BC169052.1, FQ220871.1 [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMN16093044 [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on single protein-coding transcript
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..1982
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /db_xref="taxon:10116"
                     /chromosome="2"
                     /map="2q23"
     gene            1..1982
                     /gene="Car13"
                     /gene_synonym="Ca13; RGD1560453"
                     /note="carbonic anhydrase 13"
                     /db_xref="GeneID:499566"
                     /db_xref="RGD:1560453"
     exon            1..92
                     /gene="Car13"
                     /gene_synonym="Ca13; RGD1560453"
                     /inference="alignment:Splign:2.1.0"
     CDS             56..844
                     /gene="Car13"
                     /gene_synonym="Ca13; RGD1560453"
                     /EC_number="4.2.1.1"
                     /note="carbonic anhydrase XIII"
                     /codon_start=1
                     /product="carbonic anhydrase 13"
                     /protein_id="NP_001128465.1"
                     /db_xref="GeneID:499566"
                     /db_xref="RGD:1560453"
                     /translation="MARLSWGYDEHNGPIHWNELFPIADGDQQSPIEIKTKEVKYDSS
                     LRPLSIKYDPASAKIISNSGHSFNVDFDDTEDKSVLRGGPLTGSYRLRQFHLHWGSAD
                     DHGSEHVVDGVRYAAELHVVHWNSDKYPSFVEAAHESDGLAVLGVFLQIGEHNPQLQK
                     ITDILDSIKEKGKQTRFTNFDPLCLLPSSWDYWTYPGSLTVPPLLESVTWIVLKQPIS
                     ISSQQLARFRSLLCTAEGESAAFLLSNHRPPQPLKGRRVRASFY"
     exon            93..290
                     /gene="Car13"
                     /gene_synonym="Ca13; RGD1560453"
                     /inference="alignment:Splign:2.1.0"
     exon            291..409
                     /gene="Car13"
                     /gene_synonym="Ca13; RGD1560453"
                     /inference="alignment:Splign:2.1.0"
     exon            410..505
                     /gene="Car13"
                     /gene_synonym="Ca13; RGD1560453"
                     /inference="alignment:Splign:2.1.0"
     exon            506..568
                     /gene="Car13"
                     /gene_synonym="Ca13; RGD1560453"
                     /inference="alignment:Splign:2.1.0"
     exon            569..724
                     /gene="Car13"
                     /gene_synonym="Ca13; RGD1560453"
                     /inference="alignment:Splign:2.1.0"
     exon            725..1982
                     /gene="Car13"
                     /gene_synonym="Ca13; RGD1560453"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 ggacgccctg ccacaggtcc acagtgtccc tgccacaggc tctccatcga ggaccatggc
       61 gaggttaagc tggggatacg acgagcacaa cggtcctatt cactggaatg aattgttccc
      121 tattgcggat ggtgatcagc agtctccaat tgagattaaa accaaagaag tgaaatacga
      181 ctcctcactc cgacctctca gtatcaagta tgatcctgcc tcggctaaaa tcatcagcaa
      241 cagtggccat tccttcaacg ttgactttga cgacacagag gacaaatcag ttctgcgtgg
      301 aggtcctctc actggaagct acaggttgcg gcagttccat ctgcactggg ggtcagcaga
      361 cgaccatggc tctgagcatg tggtggatgg cgtgaggtat gctgcagagc tgcatgttgt
      421 ccactggaat tcagacaaat accccagttt tgtagaggca gctcatgagt ccgatgggct
      481 ggctgtcctg ggagtatttc tacagattgg ggaacacaat cctcaactgc aaaagatcac
      541 ggacattttg gattccatta aggaaaaggg taaacaaaca cggttcacaa attttgaccc
      601 cttatgtttg cttccgtcat cctgggacta ctggacatac cctggttctc tgacggttcc
      661 acctcttctt gagagtgtca cgtggattgt tttaaaacaa cctataagta tcagctctca
      721 acagttggcc agattccgaa gcctcttgtg cacagctgag ggcgagagtg cggctttcct
      781 gttaagcaat caccgtccgc cacagcccct gaagggccgc agagtgagag catctttcta
      841 ttagcactga ccagtggatc agcacaacca gagcaggaag ggagcaaaca caatggagct
      901 gagacattcc tattaatggc tttttgagaa tttcatgttt gtggattcca cttgcccagc
      961 agctttggca ccacagagaa aaccagaggt ctgaaataac ttagctcatc actcctagat
     1021 ttgccctaat ggatgtccaa ttgctaaata ttggatgtat attaatgtca tgaagtacac
     1081 tgtttcagcc cttctgacag taatgtcagc cttccaaacc tcagactgta ctaaactttg
     1141 ctgtgggctt tggctgaaca ttctaaagag cgtttgataa aaactttaaa tttactctga
     1201 aatggtatta ttcttaaaca agcagttctt acagttttaa tatttttcgc atgaatcaag
     1261 agtatatatt tcctttaata cattttctca gattctcatt ttatgtactg taatatagca
     1321 tacgacacaa aacatacagg gataaggata gaataatgtg actactcctg tgactaaaat
     1381 aacctacagt tttagtgaag aattcctcag gctaagaaca tctatttaag gcattattcc
     1441 gtctaataca ttcactcgag aatgttagtg accaccaggg tgataactga caatgtgtct
     1501 ggctcatggc attaacatga ttcagaccag cagtttacac aataccactg cagcagaaca
     1561 gccctgagct ggtgaacagg ttcccacatt tgccctgggt gctatcctat atctgttgtt
     1621 ttttctatca ccagtgaaaa caatgagccc agtcttgcat aaatgcctac accattcagt
     1681 gcattttcta ggaagaactt atgattttat aagatgccat ttggtactaa cttcagacta
     1741 ttctctctgg agtgtcgcac accatgttcc ttttgtgttt tcattatgag gtgattccat
     1801 cattaactca ataaccacac ttaagacttg aatatttgtt atacttttgc tattttgtga
     1861 aactgtgttc ctgagtttct taagtttaat aatttgtttc agatttctct catcttgtaa
     1921 atgtaaagtt aattactgag atttttcttc atattcttct cagtagaata attttatttt
     1981 ga
//
