LOCUS       XM_017592539            1271 bp    mRNA    linear   ROD 11-JUN-2023
DEFINITION  PREDICTED: Rattus norvegicus capping actin protein, gelsolin like
            (Capg), transcript variant X5, mRNA.
ACCESSION   XM_017592539
VERSION     XM_017592539.2
DBLINK      BioProject: PRJNA677964
KEYWORDS    RefSeq.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_051339.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Jan 21, 2021 this sequence version replaced XM_017592539.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_015227675.2-RS_2023_06
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.1
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 06/06/2023
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1271
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN/NHsdMcwi"
                     /db_xref="taxon:10116"
                     /chromosome="4"
                     /sex="male"
                     /tissue_type="kidney"
                     /geo_loc_name="USA: Wisconsin, Milwaukee, Medical College
                     of Wisconsin"
                     /collection_date="2019-03-08"
                     /collected_by="Rebecca Schilling"
     gene            1..1271
                     /gene="Capg"
                     /note="capping actin protein, gelsolin like; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 34 ESTs, 31 long SRA reads, 7 Proteins, and 100%
                     coverage of the annotated genomic feature by RNAseq
                     alignments, including 44 samples with support for all
                     annotated introns"
                     /db_xref="GeneID:297339"
                     /db_xref="RGD:1311724"
     CDS             100..1149
                     /gene="Capg"
                     /codon_start=1
                     /product="macrophage-capping protein isoform X1"
                     /protein_id="XP_017448028.1"
                     /db_xref="GeneID:297339"
                     /db_xref="RGD:1311724"
                     /translation="MYTPIPQSGSPFPASVQDPGLHIWRVEKLKPVPIARENHGIFFS
                     GDSYLVLHNGPEEASHLHLWIGQQSSRDEQGACAVLAVHLNTLLGERPVQHREVQGNE
                     SDLFMSYFPQGLKYREGGVESAFHKTTSGTTPAAIRKLYQVKGKKNIRATERALSWDS
                     FNTGDCFILDLGQNIFAWCGGKSNILERNKARDLALAIRDSERQGKAQVEIITDGEEP
                     AEMIQVLGPKPALKEGNPEEDITADQTNAQAAALYKVSDATGQMNLTKVADSSPFASE
                     LLIPDDCFVLDNGLCGKIYIWKGRKANEKERQAALQVADGFISRMRYSPNTQVEILPQ
                     GRESPIFKQFFKDWK"
ORIGIN      
        1 gtccagagcc aggaaccccc tgagcaaatt ggacaggagg aggctctgaa gagttgaatc
       61 actgacctga ggaggctcag cccgtcgtct gaaaacagca tgtacacgcc catccctcag
      121 agtggctctc cattcccagc ctcagtccaa gacccaggcc tacacatatg gcgtgtggag
      181 aagctgaagc cggtgcccat agcacgagag aaccatggca tctttttttc tggggattcc
      241 tacctagtgc ttcacaatgg cccggaagag gcctcccatc tgcacctgtg gataggccag
      301 cagtcatcgc gcgatgagca gggggcctgc gctgtgctag ctgtgcacct caacaccctg
      361 ctgggggagc ggcctgtgca gcaccgtgag gttcaaggga acgagtccga cctcttcatg
      421 agctacttcc cacaaggcct caagtatcgg gagggtggcg tggagtcggc gttccacaag
      481 acaacctcgg gcaccacgcc agcagccatc aggaagctct accaggttaa ggggaagaag
      541 aacatccgtg cgaccgagag ggctctgagc tgggacagct tcaacactgg ggactgcttc
      601 atcctggacc tgggtcagaa catctttgcc tggtgtggtg gcaagtccaa catcctggag
      661 cgcaacaagg cgagagacct ggccctggcc atccgggaca gcgagcggca ggggaaggcc
      721 caggtggaga tcatcactga cggagaggag ccagccgaga tgatccaggt tctgggcccc
      781 aagcctgctc tgaaggaggg caaccctgag gaggacatta cagcggacca gaccaacgcc
      841 caggctgcag ccctgtataa ggtctctgat gccactggac agatgaatct gaccaaggtg
      901 gctgactcca gcccgtttgc ctctgaactg ctaattccag atgactgctt tgttctggac
      961 aacgggctat gtggcaaaat ctacatctgg aaggggagaa aagccaatga gaaggagcgg
     1021 caggcggccc tccaagtggc tgatggcttc atctctcgaa tgagatattc cccaaacact
     1081 caggtggaga ttctgcccca gggccgagag agtcccatct tcaagcagtt cttcaaggac
     1141 tggaagtgag ggtgggtgtc cccatccctg ctctcctgcc cccaccacct gcctgcttgt
     1201 ttcccctctg gctgctgagt cagaactgag gggccctctg gatgctcaat aaaggacacg
     1261 ttctgttccc a
//
