LOCUS       XM_006236663            1315 bp    mRNA    linear   ROD 11-JUN-2023
DEFINITION  PREDICTED: Rattus norvegicus capping actin protein, gelsolin like
            (Capg), transcript variant X2, mRNA.
ACCESSION   XM_006236663
VERSION     XM_006236663.4
DBLINK      BioProject: PRJNA677964
KEYWORDS    RefSeq.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_051339.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            [WARNING] On Feb 22, 2024 this sequence was replaced by
            XM_006236663.5.
            
            On Jan 21, 2021 this sequence version replaced XM_006236663.3.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_015227675.2-RS_2023_06
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.1
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 06/06/2023
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1315
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN/NHsdMcwi"
                     /db_xref="taxon:10116"
                     /chromosome="4"
                     /sex="male"
                     /tissue_type="kidney"
                     /geo_loc_name="USA: Wisconsin, Milwaukee, Medical College
                     of Wisconsin"
                     /collection_date="2019-03-08"
                     /collected_by="Rebecca Schilling"
     gene            1..1315
                     /gene="Capg"
                     /note="capping actin protein, gelsolin like; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 1 mRNA, 37 ESTs, 36 long SRA reads, 7 Proteins, and
                     100% coverage of the annotated genomic feature by RNAseq
                     alignments, including 110 samples with support for all
                     annotated introns"
                     /db_xref="GeneID:297339"
                     /db_xref="RGD:1311724"
     CDS             144..1193
                     /gene="Capg"
                     /codon_start=1
                     /product="macrophage-capping protein isoform X1"
                     /protein_id="XP_006236725.1"
                     /db_xref="GeneID:297339"
                     /db_xref="RGD:1311724"
                     /translation="MYTPIPQSGSPFPASVQDPGLHIWRVEKLKPVPIARENHGIFFS
                     GDSYLVLHNGPEEASHLHLWIGQQSSRDEQGACAVLAVHLNTLLGERPVQHREVQGNE
                     SDLFMSYFPQGLKYREGGVESAFHKTTSGTTPAAIRKLYQVKGKKNIRATERALSWDS
                     FNTGDCFILDLGQNIFAWCGGKSNILERNKARDLALAIRDSERQGKAQVEIITDGEEP
                     AEMIQVLGPKPALKEGNPEEDITADQTNAQAAALYKVSDATGQMNLTKVADSSPFASE
                     LLIPDDCFVLDNGLCGKIYIWKGRKANEKERQAALQVADGFISRMRYSPNTQVEILPQ
                     GRESPIFKQFFKDWK"
ORIGIN      
        1 agcccagtgg agaagaggga agtcagaagc cagcgtgggg caggctgaga ctagtcggag
       61 aagaaaaggc cggtggagag gaggaggtct cagacctgga gatctgcaga ggccatcaac
      121 ctgtcaggag gtctgaaaac agcatgtaca cgcccatccc tcagagtggc tctccattcc
      181 cagcctcagt ccaagaccca ggcctacaca tatggcgtgt ggagaagctg aagccggtgc
      241 ccatagcacg agagaaccat ggcatctttt tttctgggga ttcctaccta gtgcttcaca
      301 atggcccgga agaggcctcc catctgcacc tgtggatagg ccagcagtca tcgcgcgatg
      361 agcagggggc ctgcgctgtg ctagctgtgc acctcaacac cctgctgggg gagcggcctg
      421 tgcagcaccg tgaggttcaa gggaacgagt ccgacctctt catgagctac ttcccacaag
      481 gcctcaagta tcgggagggt ggcgtggagt cggcgttcca caagacaacc tcgggcacca
      541 cgccagcagc catcaggaag ctctaccagg ttaaggggaa gaagaacatc cgtgcgaccg
      601 agagggctct gagctgggac agcttcaaca ctggggactg cttcatcctg gacctgggtc
      661 agaacatctt tgcctggtgt ggtggcaagt ccaacatcct ggagcgcaac aaggcgagag
      721 acctggccct ggccatccgg gacagcgagc ggcaggggaa ggcccaggtg gagatcatca
      781 ctgacggaga ggagccagcc gagatgatcc aggttctggg ccccaagcct gctctgaagg
      841 agggcaaccc tgaggaggac attacagcgg accagaccaa cgcccaggct gcagccctgt
      901 ataaggtctc tgatgccact ggacagatga atctgaccaa ggtggctgac tccagcccgt
      961 ttgcctctga actgctaatt ccagatgact gctttgttct ggacaacggg ctatgtggca
     1021 aaatctacat ctggaagggg agaaaagcca atgagaagga gcggcaggcg gccctccaag
     1081 tggctgatgg cttcatctct cgaatgagat attccccaaa cactcaggtg gagattctgc
     1141 cccagggccg agagagtccc atcttcaagc agttcttcaa ggactggaag tgagggtggg
     1201 tgtccccatc cctgctctcc tgcccccacc acctgcctgc ttgtttcccc tctggctgct
     1261 gagtcagaac tgaggggccc tctggatgct caataaagga cacgttctgt tccca
//
