LOCUS       XM_039095302            2901 bp    mRNA    linear   ROD 11-JUN-2023
DEFINITION  PREDICTED: Rattus norvegicus cyclase associated actin cytoskeleton
            regulatory protein 2 (Cap2), transcript variant X1, mRNA.
ACCESSION   XM_039095302
VERSION     XM_039095302.1
DBLINK      BioProject: PRJNA677964
KEYWORDS    RefSeq.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_051352.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            [WARNING] On Feb 22, 2024 this sequence was replaced by
            XM_039095302.2.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_015227675.2-RS_2023_06
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.1
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 06/06/2023
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2901
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN/NHsdMcwi"
                     /db_xref="taxon:10116"
                     /chromosome="17"
                     /sex="male"
                     /tissue_type="kidney"
                     /geo_loc_name="USA: Wisconsin, Milwaukee, Medical College
                     of Wisconsin"
                     /collection_date="2019-03-08"
                     /collected_by="Rebecca Schilling"
     gene            1..2901
                     /gene="Cap2"
                     /note="cyclase associated actin cytoskeleton regulatory
                     protein 2; Derived by automated computational analysis
                     using gene prediction method: Gnomon. Supporting evidence
                     includes similarity to: 39 ESTs, 1 long SRA read, 7
                     Proteins, and 100% coverage of the annotated genomic
                     feature by RNAseq alignments, including 8 samples with
                     support for all annotated introns"
                     /db_xref="GeneID:116653"
                     /db_xref="RGD:620310"
     CDS             127..1560
                     /gene="Cap2"
                     /codon_start=1
                     /product="adenylyl cyclase-associated protein 2 isoform
                     X1"
                     /protein_id="XP_038951230.1"
                     /db_xref="GeneID:116653"
                     /db_xref="RGD:620310"
                     /translation="MADMLGLMQRLEFAVSRLERLSSGLHEPPGGCGEVNSLSRGIVA
                     PSVEAFDKLINSMVAEFLKNSRVLAGDVETHAEMVHGAFQAQRAFLLMVSQHQQPQEN
                     EVAVLLKPISEKIQEIQTFRERNRGSDMFNHLSAVSESIAALGWIAVSPKPGPYVKEM
                     NDAATFYTNRVLRDYKHSDLRHVDWVRSYLKIWSELQAYIKEHHTTGLTWSKTGPVAS
                     TASAFSILSSGPGLPPPPPPPPPPGPPPPFENEGGKEEPSPSRSALFAQLNQGEAITK
                     GLRHVTDDKKIYKNPSLRAQGQIRSPTKTRTPSPTSSKSNSPQKHAPVLELEGKKWRV
                     EYQEDRNDLVISETELKQVAYIFKCDKSTLQIKGKVNSITVDNCKKFGLVFDHVVGIV
                     EVINSKDIQIQVMGRVPTISINKTEGCHLYLSKDALDCEIVSAKSSEMNVLVPQGDDY
                     REFPIPEQFKTIWDGSKLITEPAEIMA"
ORIGIN      
        1 ctcaaagctg agataacagg atatgccgag cctagatgag ttacggacat catattcaag
       61 ggggacaact gtgaacttac tgtcaagtgt agacgaaggc ttgagaacaa aaggcttgtg
      121 aaaagaatgg cagacatgct gggactgatg cagaggctgg aattcgccgt cagccggctg
      181 gagcggctgt cctcagggtt acacgaacct cccggaggct gtggggaagt taacagcctc
      241 agtagaggca tagtagcacc atccgtggaa gcctttgaca aactgataaa cagtatggtg
      301 gccgagttct taaaaaacag ccgagtcctt gctggcgacg tagagactca cgcggaaatg
      361 gtacatggtg ctttccaggc gcagcgtgct tttcttctca tggtctctca gcaccaacaa
      421 ccccaggaga atgaagttgc tgtccttctg aaacccatat cggagaagat tcaagaaata
      481 cagacattcc gcgagagaaa ccgggggagc gacatgttca accacctctc ggcagtcagc
      541 gagagcatcg ccgccctggg gtggatagcc gtgtctccca aacctggtcc atatgtcaag
      601 gagatgaacg acgccgccac cttttacact aacagggtcc tgagggacta caagcacagc
      661 gatctgcgcc acgtggattg ggtgaggtcc tatctcaaga tctggagcga actgcaagcc
      721 tacatcaagg agcaccacac cacaggcctc acttggagta aaactggtcc tgtagcatcc
      781 acagcatcag cgttttccat tctctcctct gggcccggtc tccctccacc acctccacca
      841 ccacctcctc ctggaccacc tccccctttt gagaatgagg gcggaaagga ggagccctcc
      901 ccgtctcgct cagctttgtt tgcccagcta aatcagggag aagccatcac aaaagggctc
      961 cgacatgtca cggacgacaa gaaaatatac aagaatccca gcttgagggc ccaaggacaa
     1021 attcgatctc caaccaaaac ccgcacgccg agccctacat cttcaaaatc gaattctcct
     1081 cagaaacatg ctccagtgtt ggagttggaa gggaagaaat ggagagtgga ataccaagag
     1141 gacaggaatg accttgtcat ctcagagact gagctaaaac aagtggcgta cattttcaaa
     1201 tgtgacaaat ccactcttca gataaaggga aaagtaaact ccatcaccgt cgataactgc
     1261 aagaagtttg gcctggtgtt cgaccatgtg gtgggcatcg tggaagtgat caactccaag
     1321 gacattcaga tccaggtaat ggggagagtg ccaacaatct ccattaataa gacagaagga
     1381 tgccacctgt acctcagtaa agatgcgcta gactgtgaga tcgtgagcgc caagtcgtcc
     1441 gagatgaatg tcctggtccc tcagggtgac gattatagag aatttcccat tcctgagcag
     1501 ttcaagacga tatgggacgg atccaagctc atcaccgaac ctgcagaaat catggcctga
     1561 cctccaagag atatccttcc ccgagtccct ccagctggca gaagcaaaca gctaatagga
     1621 gctagatttc accatagccc cggcgtccat gtcagcgtcc tgcagttctg tgccgtggaa
     1681 aacagtttct tttctggcag gcttttatgg gcgttttgaa atatttacca tttgatcgtg
     1741 ctttgtgtgt gatttttact tccacatgat aactagtgaa cacagcagag agagagagaa
     1801 aaggattctg ttcccatcgg atcacacacc gtgacaccca ttttgtcctt ttggtttaat
     1861 tgctagttgg aaaaaaaaaa tgaagcctta gagagtctat gtctgttttt acctttcaga
     1921 caactttagc atgatgaaat agtcttgtgc cctgaagaat aagactattt tttaattttc
     1981 acgtgttcac cttcatcacc gaggacatcc tgtcagtgtg aatgtacact tcaatccatg
     2041 tttttacaca cacgtctaca caaagaggaa acagaattct aagtttatag ttactgaaaa
     2101 atgaaggaaa tcttaactcc tcatcttaaa catccttccg ctgagtcact ttgaaaattc
     2161 ttacttgtct gcctttccct aagacaaagg gtggtggcag agaggggtag ggtagggtgg
     2221 agactcagtc ctcatttttt gctctgtaac accttatggt tctgttccaa gaatagctcg
     2281 actgttggac aaccccatgc aggtctctaa tgcttatcag acatgagtcc ctcttccaat
     2341 ggccaggctc cccagtgcta accagcctca aaggcaaaag cccgagagcc acagccagac
     2401 tgttgcttct cgaatcagtt gcttggctct ggttgggttt cctagccttg acagcacact
     2461 ctctcccagg tgagcaacaa tgctctccat gtctcttctc tgcacacggc cgagaactct
     2521 gaagctttgg ggccgtgtgg agcgaagcct agcgctgagc tttcggaacc gatgggagca
     2581 tctagactgt gcctatgaat gccttgctgg aagtcattgt cagtctctga atagcttctg
     2641 tatccattta gtatttgcat ctctgataat tgtgtatcaa agttttgcta taaaagttct
     2701 gtccttctgg actaggttgt ggctttagta agtataattt tttttttttt ggttcttttt
     2761 ttcggagctg gggaccgaac ccagggcctt gcgcttccta ggcaagcgct ctaccactga
     2821 gctaaatccc caaccccagt aagtatgatt tttgaacagt aaagttacac taagtaaaaa
     2881 ctaattgttt aaatactgag a
//
