LOCUS       NM_001012212            1424 bp    mRNA    linear   ROD 23-MAR-2023
DEFINITION  Rattus norvegicus calreticulin 3 (Calr3), mRNA.
ACCESSION   NM_001012212 XM_344490
VERSION     NM_001012212.1
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
REFERENCE   1  (bases 1 to 1424)
  AUTHORS   Tokuhiro K, Ikawa M, Benham AM and Okabe M.
  TITLE     Protein disulfide isomerase homolog PDILT is required for quality
            control of sperm membrane protein ADAM3 and male fertility
            [corrected]
  JOURNAL   Proc Natl Acad Sci U S A 109 (10), 3850-3855 (2012)
   PUBMED   22357757
  REMARK    Erratum:[Proc Natl Acad Sci U S A. 2012 Apr 10;109(15):5905]
REFERENCE   2  (bases 1 to 1424)
  AUTHORS   Nomura R, Orii M and Senda T.
  TITLE     Calreticulin-2 is localized in the lumen of the endoplasmic
            reticulum but is not a Ca2+ -binding protein
  JOURNAL   Histochem Cell Biol 135 (6), 531-538 (2011)
   PUBMED   21590275
COMMENT     PROVISIONAL REFSEQ: This record has not yet been subject to final
            NCBI review. The reference sequence was derived from BC079049.1.
            
            On Feb 11, 2005 this sequence version replaced XM_344490.1.
            
            ##Evidence-Data-START##
            Transcript exon combination :: BC079049.1, SRR8487227.160151.1
                                           [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMEA5756307, SAMEA5760383
                                           [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on conservation, expression,
                                      longest protein
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..1424
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /db_xref="taxon:10116"
                     /chromosome="16"
                     /map="16p14"
     gene            1..1424
                     /gene="Calr3"
                     /note="calreticulin 3"
                     /db_xref="GeneID:364529"
                     /db_xref="RGD:1309243"
     exon            1..280
                     /gene="Calr3"
                     /inference="alignment:Splign:2.1.0"
     CDS             190..1329
                     /gene="Calr3"
                     /codon_start=1
                     /product="calreticulin-3 precursor"
                     /protein_id="NP_001012212.1"
                     /db_xref="GeneID:364529"
                     /db_xref="RGD:1309243"
                     /translation="MVRARVSLWAICVLRVALATVYFQEEFLDGERWRNRWVQSTNDS
                     QFGHFRVSSGKFYGHKEKDKGLQTTQNSRFYAISASFKPFSNKGKTLVIQYTVKHEQK
                     IDCGGGYIKVFPSDLDQKNLNGKSQYYIMFGPDICGFDIKKVHVILYFKNQYHENKKS
                     IRCKVDGFTHLYTLILRPDLSYEVKVDGQSIESGSIEYDWNLTSLKKMEKTSLESRDW
                     DEVEGNKAQDWEKHFLDAGPSKPSDWNSELDGDWLQKPPYEDGLKAEGIDKDVWLHQK
                     MRPAGYLTQYDLSEFENIGAIGLELWQVRSGTIFDNFLITDDEEYAEKFGKATWGETK
                     GPEKEMDAIQAKEEVKKAREEDEDLLMGKFHRHNHFSRFHRQGEL"
     exon            281..382
                     /gene="Calr3"
                     /inference="alignment:Splign:2.1.0"
     exon            383..586
                     /gene="Calr3"
                     /inference="alignment:Splign:2.1.0"
     exon            587..681
                     /gene="Calr3"
                     /inference="alignment:Splign:2.1.0"
     exon            682..870
                     /gene="Calr3"
                     /inference="alignment:Splign:2.1.0"
     exon            871..966
                     /gene="Calr3"
                     /inference="alignment:Splign:2.1.0"
     exon            967..1098
                     /gene="Calr3"
                     /inference="alignment:Splign:2.1.0"
     exon            1099..1191
                     /gene="Calr3"
                     /inference="alignment:Splign:2.1.0"
     exon            1192..1396
                     /gene="Calr3"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 cgcgctccac ccaccaataa gtgcttcagg tcacaatcgc ggggcgtcac gggatctgta
       61 attccagtgc gcccattcag cagcctcagg tcataatccc aaggcatgcc tggagttgta
      121 gtttccgagt tgcgcccctc aggcggtacg gacgcctgaa agcggagagt ggaagtctca
      181 cgtgcagcta tggtccgggc tcgcgtgtcg ctctgggcca tctgcgtgct gcgcgtggca
      241 ctggccactg tatacttcca ggaggagttt ctagacggag agcgctggag gaaccgctgg
      301 gtgcagtcca ccaatgactc ccagttcggg cacttccgag tctcatcggg gaagttctat
      361 gggcataaag agaaagacaa aggcctgcag accacccaga acagccgatt ctacgccatc
      421 tctgcaagct tcaagccatt cagcaacaaa gggaagaccc tggtaatcca gtacacggtg
      481 aagcatgagc agaagatcga ctgtggcggt ggctacatca aggtcttccc gtctgacctg
      541 gatcagaaga atctgaatgg aaagtcccaa tactacatca tgtttggacc tgatatctgt
      601 ggatttgata tcaagaaagt tcatgttatc ttatatttca agaatcaata tcatgaaaat
      661 aagaagtcga tcagatgcaa ggtggatggc ttcacgcatc tctacaccct gatcttaagg
      721 ccagatcttt cttatgaggt aaaagtcgat ggccagtcca tcgagtctgg cagcattgag
      781 tatgactgga acctgacatc gctgaagaaa atggaaaaaa catcactgga gtctagggac
      841 tgggatgagg tggaaggtaa caaagcccag gactgggaaa agcactttct ggatgccggt
      901 cccagcaagc caagcgactg gaacagtgag ctggatgggg actggctgca gaagccacca
      961 tacgaggatg gcctgaaagc tgagggcatc gacaaggacg tgtggctcca ccagaagatg
     1021 aggcccgctg gctacctgac gcagtatgac ctctcagagt ttgagaacat cggcgccatt
     1081 ggtctggagc tgtggcaggt gagatctgga accatctttg ataacttcct gatcacagat
     1141 gatgaagaat acgcagagaa gtttggcaag gccacctggg gggaaactaa gggtccagaa
     1201 aaggagatgg atgccataca ggccaaggaa gaagtaaaaa aagcccgaga ggaagatgag
     1261 gatctgctga tggggaagtt tcacaggcac aaccatttca gcagattcca taggcagggc
     1321 gaactgtagt catcccgggt ctgcatgctg acgactggcc cagctgcaac tctgcattaa
     1381 tacacatctg aacggtaaaa aaaaaaaaaa aaaaaaaaaa aaaa
//
