LOCUS       NM_001024976            1097 bp    mRNA    linear   ROD 02-JUN-2024
DEFINITION  Rattus norvegicus calcium homeostasis modulator family member 6
            (Calhm6), mRNA.
ACCESSION   NM_001024976 XM_215400
VERSION     NM_001024976.1
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
REFERENCE   1  (bases 1 to 1097)
  AUTHORS   Gaudet,P., Livstone,M.S., Lewis,S.E. and Thomas,P.D.
  TITLE     Phylogenetic-based propagation of functional annotations within the
            Gene Ontology consortium
  JOURNAL   Brief Bioinform 12 (5), 449-462 (2011)
   PUBMED   21873635
REFERENCE   2  (bases 1 to 1097)
  AUTHORS   Gerhard,D.S., Wagner,L., Feingold,E.A., Shenmen,C.M., Grouse,L.H.,
            Schuler,G., Klein,S.L., Old,S., Rasooly,R., Good,P., Guyer,M.,
            Peck,A.M., Derge,J.G., Lipman,D., Collins,F.S., Jang,W., Sherry,S.,
            Feolo,M., Misquitta,L., Lee,E., Rotmistrovsky,K., Greenhut,S.F.,
            Schaefer,C.F., Buetow,K., Bonner,T.I., Haussler,D., Kent,J.,
            Kiekhaus,M., Furey,T., Brent,M., Prange,C., Schreiber,K.,
            Shapiro,N., Bhat,N.K., Hopkins,R.F., Hsie,F., Driscoll,T.,
            Soares,M.B., Casavant,T.L., Scheetz,T.E., Brown-stein,M.J.,
            Usdin,T.B., Toshiyuki,S., Carninci,P., Piao,Y., Dudekula,D.B.,
            Ko,M.S., Kawakami,K., Suzuki,Y., Sugano,S., Gruber,C.E.,
            Smith,M.R., Simmons,B., Moore,T., Waterman,R., Johnson,S.L.,
            Ruan,Y., Wei,C.L., Mathavan,S., Gunaratne,P.H., Wu,J., Garcia,A.M.,
            Hulyk,S.W., Fuh,E., Yuan,Y., Sneed,A., Kowis,C., Hodgson,A.,
            Muzny,D.M., McPherson,J., Gibbs,R.A., Fahey,J., Helton,E.,
            Ketteman,M., Madan,A., Rodrigues,S., Sanchez,A., Whiting,M.,
            Madari,A., Young,A.C., Wetherby,K.D., Granite,S.J., Kwong,P.N.,
            Brinkley,C.P., Pearson,R.L., Bouffard,G.G., Blakesly,R.W.,
            Green,E.D., Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J.,
            Myers,R.M., Butterfield,Y.S., Griffith,M., Griffith,O.L.,
            Krzywinski,M.I., Liao,N., Morin,R., Palmquist,D., Petrescu,A.S.,
            Skalska,U., Smailus,D.E., Stott,J.M., Schnerch,A., Schein,J.E.,
            Jones,S.J., Holt,R.A., Baross,A., Marra,M.A., Clifton,S.,
            Makowski,K.A., Bosak,S. and Malek,J.
  CONSRTM   MGC Project Team
  TITLE     The status, quality, and expansion of the NIH full-length cDNA
            project: the Mammalian Gene Collection (MGC)
  JOURNAL   Genome Res 14 (10B), 2121-2127 (2004)
   PUBMED   15489334
  REMARK    Erratum:[Genome Res. 2006 Jun;16(6):804. Morrin, Ryan [corrected to
            Morin, Ryan]]
REFERENCE   3  (bases 1 to 1097)
  AUTHORS   Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
            Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
            Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
            Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
            Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
            Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
            Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
            Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
            Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
            McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
            Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
            Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
            Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
            Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
            Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
            Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
            Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
            Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
  CONSRTM   Mammalian Gene Collection Program Team
  TITLE     Generation and initial analysis of more than 15,000 full-length
            human and mouse cDNA sequences
  JOURNAL   Proc Natl Acad Sci U S A 99 (26), 16899-16903 (2002)
   PUBMED   12477932
COMMENT     PROVISIONAL REFSEQ: This record has not yet been subject to final
            NCBI review. The reference sequence was derived from BC093379.1.
            
            On Jun 25, 2005 this sequence version replaced XM_215400.2.
            
            ##Evidence-Data-START##
            Transcript exon combination :: BC093379.1, CV074210.1 [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMEA5760389, SAMEA5760434
                                           [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on conservation, expression,
                                      longest protein
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..1097
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /db_xref="taxon:10116"
                     /chromosome="20"
                     /map="20q11"
     gene            1..1097
                     /gene="Calhm6"
                     /gene_synonym="Fam26f; RGD1304835"
                     /note="calcium homeostasis modulator family member 6"
                     /db_xref="GeneID:294430"
                     /db_xref="RGD:1304835"
     exon            1..571
                     /gene="Calhm6"
                     /gene_synonym="Fam26f; RGD1304835"
                     /inference="alignment:Splign:2.1.0"
     CDS             47..994
                     /gene="Calhm6"
                     /gene_synonym="Fam26f; RGD1304835"
                     /note="protein FAM26F; family with sequence similarity 26,
                     member F"
                     /codon_start=1
                     /product="calcium homeostasis modulator protein 6"
                     /protein_id="NP_001020147.1"
                     /db_xref="GeneID:294430"
                     /db_xref="RGD:1304835"
                     /translation="MEKFKAVLDLQIKHRSALGYGLVTLLTAGGEKIFSTVVFQCPCT
                     ATLNLTYGLVFLLVPALALFLLGYALSARTWRLLTGCCSRSASTRSSSGLRSTLVCAQ
                     VSAVAALAPLTWVAVALLGGSFYQCAVSGSTRLASYLCKDRNHSCIAKLPQVPCNKQE
                     AEMQEILSQLKAQSQVLGWVLIAAVIFLLLVFKCVSRCFSPVSYLQLKFWEIYLEKEK
                     QILQSQAAEHATQLARENIRSFFECSKPKECNTPSRKDWQQISALYTFNSKNQFYSML
                     HKYVSRKEVSSSLHSVEGDVVVPVLGFVDDAAMANTHGV"
     exon            572..1066
                     /gene="Calhm6"
                     /gene_synonym="Fam26f; RGD1304835"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 gagaaccaga gcagagcccg cagggtgcct agggtgagaa gaactcatgg agaagttcaa
       61 ggcggtgctg gacctgcaga tcaagcaccg cagtgccctg ggctatggcc tggtgaccct
      121 gctgacggct ggtggggaga agatcttctc cacagtggtg ttccagtgtc cctgcactgc
      181 caccttgaac ctgacctacg gcctggtgtt cctgctggtg cctgctttag cgcttttcct
      241 cctgggctat gcgctgagcg cgcgcacatg gcgtctgctc accggctgct gctcccggag
      301 tgcaagcacg cgatccagtt cggggttgcg cagcacactc gtatgcgcgc aggtcagcgc
      361 ggtcgcagcg ctcgctcccc tcacctgggt ggccgtggcg ctacttgggg gctccttcta
      421 tcaatgtgct gtcagcggga gcacacgctt ggcgtcatat ttgtgcaagg accgcaacca
      481 cagctgcatt gccaagctac ctcaggttcc ctgcaacaag caggaggcgg agatgcagga
      541 gatcctgagt cagctcaagg cccagtctca ggtgctcggt tgggttctga tagctgccgt
      601 catcttctta cttctggttt ttaagtgtgt gtcccgatgc ttctctccgg ttagttatct
      661 gcagttaaaa ttctgggaaa tctacttgga aaaggagaag cagatccttc aaagtcaagc
      721 tgcagaacac gcgacccagt tggcaagaga gaatattaga agtttctttg agtgctcaaa
      781 gccgaaggaa tgcaacaccc caagcagaaa agactggcag caaatctcag cattgtatac
      841 attcaattcc aagaaccagt tctacagcat gctgcacaag tacgttagca gaaaagaggt
      901 gagcagcagt ctccactctg tggaaggaga tgttgtggtc cctgtccttg gctttgtaga
      961 tgatgctgcc atggccaaca ctcacggagt gtgatcttgc acaagaacag aaaaagtttt
     1021 tgaattgttg cttttatata aaaaaaataa acatagttat cctttaaaaa aaaaaaaaaa
     1081 aaaaaaaaaa aaaaaaa
//
