LOCUS       NM_001191956            1035 bp    mRNA    linear   ROD 30-MAR-2024
DEFINITION  Rattus norvegicus calcium homeostasis modulator 3 (Calhm3), mRNA.
ACCESSION   NM_001191956 XM_574682
VERSION     NM_001191956.1
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
REFERENCE   1  (bases 1 to 1035)
  AUTHORS   Ma,Z., Taruno,A., Ohmoto,M., Jyotaki,M., Lim,J.C., Miyazaki,H.,
            Niisato,N., Marunaka,Y., Lee,R.J., Hoff,H., Payne,R., Demuro,A.,
            Parker,I., Mitchell,C.H., Henao-Mejia,J., Tanis,J.E., Matsumoto,I.,
            Tordoff,M.G. and Foskett,J.K.
  TITLE     CALHM3 Is Essential for Rapid Ion Channel-Mediated Purinergic
            Neurotransmission of GPCR-Mediated Tastes
  JOURNAL   Neuron 98 (3), 547-561 (2018)
   PUBMED   29681531
COMMENT     PROVISIONAL REFSEQ: This record has not yet been subject to final
            NCBI review. The reference sequence was derived from
            JAXUCZ010000001.1.
            
            On Jul 17, 2010 this sequence version replaced XM_574682.2.
            
            Sequence Note: The RefSeq transcript and protein were derived from
            genomic sequence to make the sequence consistent with the reference
            genome assembly. The genomic coordinates used for the transcript
            record were based on alignments.
            
            ##Evidence-Data-START##
            Transcript exon combination :: SRR26360181.1811448.1,
                                           SRR26360181.1839856.1 [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMEA5760383, SAMEA5760434
                                           [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on single protein-coding transcript
            ##RefSeq-Attributes-END##
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-287               JAXUCZ010000001.1  255989308-255989594 c
            288-543             JAXUCZ010000001.1  255987370-255987625 c
            544-1035            JAXUCZ010000001.1  255984593-255985084 c
FEATURES             Location/Qualifiers
     source          1..1035
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN"
                     /db_xref="taxon:10116"
                     /chromosome="1"
                     /map="1q54"
     gene            1..1035
                     /gene="Calhm3"
                     /gene_synonym="Fam26a; RGD1560215"
                     /note="calcium homeostasis modulator 3"
                     /db_xref="GeneID:499368"
                     /db_xref="RGD:1560215"
     CDS             1..1035
                     /gene="Calhm3"
                     /gene_synonym="Fam26a; RGD1560215"
                     /note="family with sequence similarity 26, member A"
                     /codon_start=1
                     /product="calcium homeostasis modulator protein 3"
                     /protein_id="NP_001178885.1"
                     /db_xref="GeneID:499368"
                     /db_xref="RGD:1560215"
                     /translation="MDRFRMLFQNFQSSSESVTNGICLLLAAVTVKMYSSLDFNCPCL
                     EHYNALYGLGLLLTPPLALFLCGLLVNRQSVLMVEEWRRPAGHRRKDLGIIRYMCSSV
                     LQRALAAPLVWILLALLDGKCLVCAFSNSVDPEKFLDFANMTPSQVQLFLAKVPCKED
                     ELVKTSPARKAVSRYLRCLSQAIGWSITLLVIVVAFLARCLRPCFNQTVFLQRRYWSN
                     YMDLEQKLFDETCCEHARDFAHRCVLHFFASMQSELRALGLHRDPAGEILESQEPPEP
                     PEEPGSESGKAHLRAISSREQVNHLLSTWYSSKPPLDLAASPRLWEPGLNHRAPIAAP
                     GTKLGHQLDV"
     exon            1..287
                     /gene="Calhm3"
                     /gene_synonym="Fam26a; RGD1560215"
                     /inference="alignment:Splign:2.1.0"
     exon            288..543
                     /gene="Calhm3"
                     /gene_synonym="Fam26a; RGD1560215"
                     /inference="alignment:Splign:2.1.0"
     exon            544..1035
                     /gene="Calhm3"
                     /gene_synonym="Fam26a; RGD1560215"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 atggacaggt tccgaatgct cttccagaac ttccagtcca gctcggagtc ggtgacgaac
       61 ggcatctgcc tcctgctggc tgctgtcacc gtcaagatgt actcctccct cgacttcaac
      121 tgtccctgcc tagagcacta caatgccctc tatggcctgg gcctgctgct cacaccccct
      181 ctggccctct tcctctgtgg tctcttggtc aatagacagt ctgtgttgat ggtggaggag
      241 tggcgccggc cagcagggca ccggaggaag gacctaggca tcatcaggta catgtgctcc
      301 tctgtgctgc agcgagctct agcagcacct ctggtctgga tcttactggc cctccttgat
      361 gggaagtgtc ttgtgtgtgc cttcagcaac tccgttgacc ctgagaagtt tctggatttt
      421 gctaatatga cccccagcca ggtgcagctc ttcctagcca aggtgccctg caaggaagat
      481 gagctggtta aaaccagccc agctcgcaag gctgtgtctc ggtacctccg gtgcctgtca
      541 caggccatcg gctggagtat aaccttgctg gtgatagtgg tggccttcct agcccgctgt
      601 ctgaggccct gcttcaacca gacggtcttc ctacagcgca gatactggag caactatatg
      661 gacctggaac agaagctctt tgatgagaca tgctgtgagc atgcgcggga cttcgcacat
      721 cgctgcgtgc tgcacttctt cgcaagcatg cagagcgagc tacgcgctct ggggttacat
      781 cgggacccag ctggcgagat cctagagtca caggaacccc cggagccccc ggaggagccg
      841 ggtagtgaaa gcgggaaggc ccacctgcgt gcaatctcca gccgagagca agtgaatcac
      901 ctcctaagta cctggtactc cagcaagcca ccgcttgacc tcgcagcctc cccaaggctc
      961 tgggagcctg gcctcaatca tcgtgcccct atagctgctc caggcaccaa gctgggccac
     1021 cagcttgatg tatag
//
