LOCUS       XM_006236147            5073 bp    mRNA    linear   ROD 11-JUN-2023
DEFINITION  PREDICTED: Rattus norvegicus calcium dependent secretion activator
            2 (Cadps2), transcript variant X1, mRNA.
ACCESSION   XM_006236147
VERSION     XM_006236147.3
DBLINK      BioProject: PRJNA677964
KEYWORDS    RefSeq.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_051339.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Jan 21, 2021 this sequence version replaced XM_006236147.2.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_015227675.2-RS_2023_06
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.1
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 06/06/2023
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5073
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN/NHsdMcwi"
                     /db_xref="taxon:10116"
                     /chromosome="4"
                     /sex="male"
                     /tissue_type="kidney"
                     /geo_loc_name="USA: Wisconsin, Milwaukee, Medical College
                     of Wisconsin"
                     /collection_date="2019-03-08"
                     /collected_by="Rebecca Schilling"
     gene            1..5073
                     /gene="Cadps2"
                     /note="calcium dependent secretion activator 2; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 15 ESTs, 2 Proteins, and 100% coverage of the
                     annotated genomic feature by RNAseq alignments, including
                     21 samples with support for all annotated introns"
                     /db_xref="GeneID:312166"
                     /db_xref="RGD:1559440"
     CDS             376..4314
                     /gene="Cadps2"
                     /codon_start=1
                     /product="calcium-dependent secretion activator 2 isoform
                     X1"
                     /protein_id="XP_006236209.1"
                     /db_xref="GeneID:312166"
                     /db_xref="RGD:1559440"
                     /translation="MLDPSSSEEESDEGLEEESREVLVAPGGSQRAPPATAREGRRDA
                     PGRSGGGGGGGAARPVSPSPSVLSEGRDEPERQLDEEQERRIRLQLYVFVVRCIAYPF
                     NAKQPTDMARRQQKLNKQQLQLLKERFQAFLNGETQIVADEAFCNAVRSYYEVFLKSD
                     RVARMVQSGGCCANDFREVFKKNIEKRVRSLPEIDGLSKETVLSSWIAKYDAIYRGEE
                     DLCKQPNRMTLSAVSELILSKEQLYEMFQQILGIKKLEHQLLYNACQLDNADEQAAQI
                     RRELDGRLQLAEKMAKERRFPQFISKEMETMYIEELRASVNLLMANLESLPVSKGGPE
                     FKLQKLKRSQNSAFLDLGDENEIQLSKSDVVLSFTLEIVIMEVQGLKSVAPNRIVYCT
                     MEVEGGEKLQTDQAEASRPQWGTQGDFSTTHPRPVVKVKLFTESTGVLALEDKELGRV
                     VLYPTSNSSKSAELHRMVVPKNSQDSDLKIKLAVRMDKPPHMKHSGYLYALGQKVWKR
                     WKKRYFVLVQVSQYTFAMCSYREKKSEPQELMQLEGYTVDYTDPHPGLQGGQVFFNAV
                     KEGDTVIFASDDEQDRILWVQAMYRATGQSYKPVPAVQSQKLNPKGGTLHADAQLFGK
                     DADRFQKHGMDEFISASPCKLDHAFLFRILQRQTLDHRLNDSYSCLGWFSPGQVFVLD
                     EYCARYGVRGCHRHLCYLTELMEHSENGAVIDPTLLHYSFAFCASHVHGNRPDGIGTV
                     SVEEKERFEEIKDRLSSLLENQISHFRYCFPFGRPEGALKATLSLLERVLMKDIATPI
                     PAEEVKKVVRKCLEKAALINYTRLTEYAKIEGPAEKETETMNQATPARKLEEVLHLAE
                     LCIEVLQQNEEHHAEGREAFAWWPDLLAEHAEKFWALFTVDMDTALEAQPQDSWESFP
                     LFQLLNNFLRNDTLLCNGKFHKHLQEIFVPLVVRYVDLMESAIAQSIHRGFEQETWQP
                     VKNIANSLPNVALPKVPSLPLNLPQIPSFSTPPWMASLYESTNGSATSEDLFWKLDAL
                     QMFVFDLHWPEQEFAHHLEQRLKLMASDMIEACVKRTRTAFELKLQKANKTTDLRIPA
                     SVCTMFNVLVDAKKQSTKLCALDGGQEFGNQWQQYHSKIDDLIDNTVKEVIALLVSKF
                     VSVLEGVLSKLSRYDEGTFFSSILSFTVKAAAKYVDVPKPGMDLADTYIMFVRQNQDI
                     LREKVNEEMYIEKLFDQWYSNSMKVICVWLADRLDLQLHIYQLKTLIKIVKKTYRDFR
                     LQGVLEGTLNSKTYDTLHRRLTVEEATASVSEGGGLQGITMKDSDEEEEG"
ORIGIN      
        1 ggatattccg ttccacgtgt tgctctggag gcgccacagg ttcctcacct gcgcgggcgg
       61 cgggggtcgg cggcggggct gggcgcgcgc gcgggctagc agcccgaggc tgggcgcgcg
      121 gtccccgggc gccccgagcg cccccgcgct aactccgcct ctcgcctccc gccgctccgc
      181 tcgcccgccc cgcgtcctgt ccgcggcaaa cattcgggcg ccgaactcga cgtgtccgga
      241 aagcccgggc cactttccct ttcgttctgc ggccgccgcg caccgaccta agctcccgcg
      301 gacccgcggg gacagcgtcg ctcggcgagg agccccgggg atcgcgggcc gagtccaggc
      361 accccagcca gcactatgct cgacccgtct tccagcgagg aggagtcgga cgaggggctg
      421 gaggaggaga gccgcgaggt actggtggct ccgggcggct cccagcgagc gccgccggcc
      481 acggctcggg aagggcggcg ggacgcaccg ggacgctccg gtggtggcgg tggcggcgga
      541 gcggccagac ccgtgagccc gagcccctcg gtgctcagcg agggacgaga tgaacccgag
      601 cggcagctgg acgaggagca ggagcggcgc atccgcctgc agctgtacgt cttcgtggtg
      661 aggtgcatcg cgtacccatt caacgccaag cagcccaccg acatggcccg gaggcagcag
      721 aagcttaaca aacaacagtt gcagttactg aaagaacggt tccaggcctt tctcaatggg
      781 gagactcaga tagtagcaga cgaagccttc tgcaatgcag tccggagcta ctatgaggtt
      841 ttcctgaaga gcgaccgagt ggccagaatg gttcagagtg gaggatgctg tgctaatgac
      901 ttccgagagg tgtttaagaa gaacatagaa aagcgcgtgc gtagtttgcc agaaatagat
      961 ggcctgagca aagagacggt gctgagctca tggatagcca aatacgacgc catttacagg
     1021 ggagaagaag atttgtgcaa acagccgaac aggatgaccc tgagtgctgt gtctgagctt
     1081 attctgagta aggagcagct ctatgaaatg ttccagcaaa ttctgggtat taagaaactg
     1141 gaacaccagc tactctataa cgcatgccag ctggacaacg ctgatgagca agccgcccag
     1201 atcagaaggg agcttgacgg ccgcctgcag ttggcagaga agatggcgaa ggagagaaga
     1261 ttcccccagt ttatctcaaa agaaatggag actatgtata tagaagagtt gcgagcctct
     1321 gtgaatttgc taatggccaa tttagaaagt cttccagttt caaagggcgg tccggaattt
     1381 aaattacaaa agttaaagcg ttcccagaat tctgcgttct tggacctggg agacgagaat
     1441 gagatccagc tgtccaagtc tgacgtggtg ttgtcattca ccttagagat tgtcatcatg
     1501 gaagtgcaag gattgaaatc cgtggctccc aatcgaatcg tttactgcac aatggaggtg
     1561 gaaggaggag aaaaactcca gacagaccag gctgaagcat caagaccaca atggggaacc
     1621 caaggagatt tcagcacaac ccaccctcgg cctgtggtca aagtgaagct cttcacagaa
     1681 agcacagggg tcctggccct ggaagacaag gaactgggca gggtggtgtt atacccaact
     1741 tctaacagct ccaagtcagc ggaattacac cgaatggtag tacccaagaa cagccaggac
     1801 tcagacttaa agatcaaatt ggcagtgcgc atggataaac caccacacat gaaacacagt
     1861 gggtatctgt atgcccttgg acagaaggtt tggaagagat ggaaaaagcg atactttgtt
     1921 ctcgttcagg tgagccagta cacctttgct atgtgcagtt acagagaaaa aaagtcggaa
     1981 ccacaggaat taatgcaact tgaaggatac actgtggact acacagaccc tcacccaggc
     2041 cttcagggtg gtcaggtgtt ctttaatgct gttaaagaag gagacactgt gatatttgcc
     2101 agtgatgatg aacaggaccg aatattatgg gtccaagcca tgtacagggc tacaggccaa
     2161 tcttataaac cagttcctgc agttcaaagc cagaagctga atcctaaagg aggaaccctc
     2221 catgcagatg ctcagctttt tggtaaagat gcagaccgtt ttcagaaaca cgggatggat
     2281 gagtttattt ctgcgagtcc ttgcaagctt gaccatgcct tcctcttcag aattctccag
     2341 agacagactt tggatcacag actgaatgat tcctactcct gcctggggtg gtttagccct
     2401 ggccaagtct ttgtgttaga tgagtactgt gcccgctacg gtgtgagagg ctgtcacagg
     2461 catctgtgct accttacaga actgatggaa cattcagaaa acggtgctgt cattgacccc
     2521 accctgctcc attacagctt tgcattctgt gcctctcacg tgcacggcaa caggcctgat
     2581 gggattggaa cagtttcagt ggaagagaaa gaaagatttg aggagataaa agacagactc
     2641 tcttcgctct tagaaaacca gatcagccac ttcagatact gctttccctt cggacgacct
     2701 gagggtgctc taaaagctac gctctcgtta cttgaaaggg ttttaatgaa agacatcgcc
     2761 actcctatcc ccgcggagga ggtgaagaaa gtggtcagaa aatgtctgga gaaagctgcc
     2821 ttgatcaatt acactagact cacagaatat gccaaaattg aagggcctgc agaaaaggaa
     2881 acagagacca tgaaccaggc aactcctgcc aggaagctgg aagaggttct tcatctcgca
     2941 gagctctgca tagaagtcct acagcaaaac gaggagcatc atgctgaggg aagagaggca
     3001 tttgcctggt ggccagactt actggccgag cacgcggaga agttttgggc tttattcaca
     3061 gtagacatgg atactgcact ggaggcccaa cctcaagact cctgggaaag ctttcccctt
     3121 ttccagctgc ttaataattt cctcagaaat gacacgcttt tgtgtaatgg aaaattccac
     3181 aagcacttac aagagatctt tgtgcccttg gttgtccgct acgtcgacct gatggagtcc
     3241 gccatcgccc agtcaatcca cagaggtttt gagcaggaga catggcagcc ggtcaagaat
     3301 atcgccaaca gtcttcccaa tgtagctctt ccaaaagttc caagtctgcc tcttaatctt
     3361 ccacagattc ctagcttttc tactcctccg tggatggctt ctttatatga gtccaccaac
     3421 ggctcagcaa catccgagga tctgttctgg aaacttgatg cgctacagat gtttgtcttt
     3481 gacctccatt ggccagaaca agaatttgcc caccacttag agcaaagact taagctaatg
     3541 gccagtgata tgatagaggc ctgtgtcaaa agaacaagaa ctgcattcga actcaagctg
     3601 caaaaggcaa acaaaacaac tgacttgcgc atcccggctt ccgtgtgcac aatgtttaat
     3661 gtattagttg atgctaaaaa gcaaagcacc aagctgtgtg ccctggatgg aggacaggag
     3721 tttgggaatc agtggcaaca gtaccattca aaaatagatg atttgattga caacaccgtg
     3781 aaagaagtca ttgcgctgct ggtttcaaag ttcgtttcag tgctggaagg ggtgctttcg
     3841 aagctgtcaa ggtatgacga aggcactttc ttctcatcca ttctgtcctt cactgtgaaa
     3901 gcagctgcaa aatatgtgga tgtccctaaa ccagggatgg atctggccga cacctacatt
     3961 atgttcgttc ggcaaaacca ggatatcctt cgagaaaaag tcaatgaaga gatgtatata
     4021 gaaaagctgt ttgatcaatg gtacagcaat tccatgaaag tcatctgtgt atggctggct
     4081 gacagactag acctccagct ccatatttac caactgaaga cgctcatcaa gattgtgaag
     4141 aaaacctaca gggatttccg attgcagggt gtgttggagg gaacgctgaa cagtaagacc
     4201 tatgatactc tgcacagacg tttaaccgtg gaggaggcca cagcctctgt ctcagaagga
     4261 ggaggacttc agggcattac catgaaggat agtgatgagg aagaagaagg ctgaggacgc
     4321 acagttcctc aagaggaagg aaggcctcgg cagcgttttg tgcaccttgt ctttgtagct
     4381 gtatttactg tcttgaccaa ataaaaatgc tctaatttct ttagaaagcg aacttggaga
     4441 taaagagaga aatgccatgt atttttggaa agaaaaccat atttcatatg tatagcttca
     4501 cctagaactt ggctgtgctc gtgactggac gatgagctac ttttgttgtt ttgtttttta
     4561 attctgtttt cttttgtttg ttgttgttag tatatctgac tttgcttttc aatagtcata
     4621 tcaacataac gtcctatgtg gtcctatgag agaagcacct cccatgacac agcattgtga
     4681 agagaagcca tttctggtca cagcgccaac cctactgtac ttccgtcaaa gtggtgtgcc
     4741 tcccagttac catttatgta caaagtttgt tctgtaattt gccagtgttg tgatgtggag
     4801 aaaacttggt tttcataact ctgaatttgt ctgcaggtgt aatcctggac ttcagagagt
     4861 atcacaccca aatgtaggct agattattca cagacttaca tcctgtttct gaacattttt
     4921 tttccatgcg tacgacatcg ccaggtgtgc ttccgacaac aagtgtgaca gcttgctggc
     4981 aataaaaatc cattcagtca gagcaacttc tatgttcatt aagtagatta aatgcagtaa
     5041 aagatgtttg cagtatctca aacatcccag cta
//
