LOCUS       NM_022263               1502 bp    mRNA    linear   ROD 02-JUN-2024
DEFINITION  Rattus norvegicus calcium binding protein, spermatid associated 1
            (Cabs1), mRNA.
ACCESSION   NM_022263 XM_341196
VERSION     NM_022263.2
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
REFERENCE   1  (bases 1 to 1502)
  AUTHORS   St Laurent,C.D., St Laurent,K.E., Mathison,R.D. and Befus,A.D.
  TITLE     Calcium-binding protein, spermatid-specific 1 is expressed in human
            salivary glands and contains an anti-inflammatory motif
  JOURNAL   Am J Physiol Regul Integr Comp Physiol 308 (7), R569-R575 (2015)
   PUBMED   25632019
REFERENCE   2  (bases 1 to 1502)
  AUTHORS   Calvel,P., Kervarrec,C., Lavigne,R., Vallet-Erdtmann,V.,
            Guerrois,M., Rolland,A.D., Chalmel,F., Jegou,B. and Pineau,C.
  TITLE     CLPH, a novel casein kinase 2-phosphorylated disordered protein, is
            specifically associated with postmeiotic germ cells in rat
            spermatogenesis
  JOURNAL   J Proteome Res 8 (6), 2953-2965 (2009)
   PUBMED   19271754
  REMARK    GeneRIF: Identified CLPH (for Casein-Like PHosphoprotein), a new
            testis-specific protein expressed exclusively in postmeiotic germ
            cells.
REFERENCE   3  (bases 1 to 1502)
  AUTHORS   Kawashima,A., Osman,B.A., Takashima,M., Kikuchi,A., Kohchi,S.,
            Satoh,E., Tamba,M., Matsuda,M. and Okamura,N.
  TITLE     CABS1 is a novel calcium-binding protein specifically expressed in
            elongate spermatids of mice
  JOURNAL   Biol Reprod 80 (6), 1293-1304 (2009)
   PUBMED   19208547
COMMENT     PROVISIONAL REFSEQ: This record has not yet been subject to final
            NCBI review. The reference sequence was derived from BC079062.1.
            
            On or before Jan 21, 2005 this sequence version replaced
            XM_341196.1, NM_022263.1.
            
            ##Evidence-Data-START##
            Transcript exon combination :: BC079062.1, AF271155.1 [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMEA5760383, SAMEA5760389
                                           [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            NMD candidate          :: PMID: 19271754
            RefSeq Select criteria :: based on single protein-coding transcript
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..1502
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /db_xref="taxon:10116"
                     /chromosome="14"
                     /map="14p22"
     gene            1..1502
                     /gene="Cabs1"
                     /gene_synonym="Clph; Rsd6"
                     /note="calcium binding protein, spermatid associated 1"
                     /db_xref="GeneID:64029"
                     /db_xref="RGD:620592"
     exon            1..1324
                     /gene="Cabs1"
                     /gene_synonym="Clph; Rsd6"
                     /inference="alignment:Splign:2.1.0"
     CDS             30..1202
                     /gene="Cabs1"
                     /gene_synonym="Clph; Rsd6"
                     /note="RSD-6; casein-like phosphoprotein; calcium-binding
                     protein, spermatid-specific 1"
                     /codon_start=1
                     /product="calcium-binding and spermatid-specific protein
                     1"
                     /protein_id="NP_071599.2"
                     /db_xref="GeneID:64029"
                     /db_xref="RGD:620592"
                     /translation="MAEDGSPKIYSRPPRDSSKTPTEADIFFGADNTIPKSETTITSE
                     GDHITSVNDCTADGDFSTTVNKLTPTKEKLKLEEDIEASLKSTTLPEKEITTPTETTN
                     SKPKESITENFIPVKIGNISSPVGTVSLIDFSSNMAKEDILLATIDAEDKEVKPTTEL
                     SETQEDSSANDEDTSVPPDENTETDVSSSTSSDVPDDGAVQVTDSFSPESDVPPSTEK
                     EVTTIPDNVAEDKVTKIDLIVSEDRPKTVTKLSDSEEEKFITVFELTNSAEKAKDNPE
                     DPLTDEEPADGVNTWVEKDAANEAESHAVLLTAVESRYDFVVTASETNSVVVEEPHVD
                     TKNSPEKDAAESVTNVTEEFPSVTSVVEQSGNKEDLSTNDSGIFKLLKEEPDELMM"
     exon            1325..1473
                     /gene="Cabs1"
                     /gene_synonym="Clph; Rsd6"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 tgtgagagtg ctcggtgctc ctctgcccca tggctgaaga tggatctccc aaaatttatt
       61 ctcgtcctcc aagagacagc agtaaaacac caacagaagc ggacattttc tttggggctg
      121 acaacactat tcctaaatca gaaacaacta ttacctctga aggagaccac attacttcag
      181 taaatgactg caccgcggat ggtgattttt caactacagt caacaagctc acacctacaa
      241 aggaaaaact taaattagaa gaagatattg aagcaagtct gaaatcaaca actcttccag
      301 agaaagaaat taccactccg actgaaacta ccaactccaa acctaaggaa tcaattactg
      361 aaaatttcat tccggtgaaa attggaaata tctcatcccc agttggcact gtttctttaa
      421 ttgatttttc cagtaacatg gcgaaggaag acatcctctt agccaccatt gacgcagaag
      481 acaaagaagt caaacccact actgagctct ctgaaacaca ggaggacagc tctgccaatg
      541 atgaggatac ctctgtacct ccagatgaga atactgaaac tgatgttagt tcttcaacta
      601 gctctgacgt tcctgatgat ggagctgtcc aggtcactga ctcctttagt cctgagtctg
      661 acgtccctcc ctctactgaa aaggaggtca ccaccattcc agacaacgtt gcagaagaca
      721 aagtaactaa gattgacttg attgtttcag aagataggcc caaaactgtg actaaattaa
      781 gtgactccga agaagaaaaa tttatcactg tttttgaact cactaactca gctgaaaaag
      841 ccaaagataa cccagaagat cctttaactg atgaggagcc agctgacgga gttaatactt
      901 gggtggaaaa agatgctgca aatgaggcag agtctcatgc tgttctgctt accgccgttg
      961 aatctaggta cgacttcgtt gtcactgcct ccgaaactaa cagcgtcgtc gtggaggaac
     1021 cacacgttga cacaaagaat tcgcctgaaa aggatgcagc agagtctgtc actaatgtca
     1081 cagaggaatt tccttcagtg acctctgtag tagaacagag tgggaacaag gaggacttat
     1141 ctaccaatga ctccggtatc tttaaactgc tcaaagaaga accagatgaa ctcatgatgt
     1201 aaaaccagta acataaggga agccacatag acacacatga tgggttaaga gatagtcata
     1261 atatctaaga agttactcag caagaaaaat ctttaaaaga aaaaaaatac tgtgagcatt
     1321 taagatctta aacgttgact attgtactct tcttagacag ttggttagca attcaaggac
     1381 acatatcttc attcttttct gattcagact tttcaagtgg gtctgttgtc actgggctga
     1441 ttctcctcaa taaattattc tggcagcaac tgaaaaaaaa aaaaaaaaaa aaaaaaaaaa
     1501 aa
//
