LOCUS       NM_001108926            1443 bp    mRNA    linear   ROD 26-FEB-2024
DEFINITION  Rattus norvegicus calcium binding protein 4 (Cabp4), mRNA.
ACCESSION   NM_001108926 XM_001068353 XM_344981
VERSION     NM_001108926.1
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
REFERENCE   1  (bases 1 to 1443)
  AUTHORS   Haeseleer F, Williams B and Lee A.
  TITLE     Characterization of C-terminal Splice Variants of Cav1.4 Ca2+
            Channels in Human Retina
  JOURNAL   J Biol Chem 291 (30), 15663-15673 (2016)
   PUBMED   27226626
REFERENCE   2  (bases 1 to 1443)
  AUTHORS   McCue HV, Haynes LP and Burgoyne RD.
  TITLE     The diversity of calcium sensor proteins in the regulation of
            neuronal function
  JOURNAL   Cold Spring Harb Perspect Biol 2 (8), a004085 (2010)
   PUBMED   20668007
  REMARK    Review article
REFERENCE   3  (bases 1 to 1443)
  AUTHORS   McCue HV, Burgoyne RD and Haynes LP.
  TITLE     Membrane targeting of the EF-hand containing calcium-sensing
            proteins CaBP7 and CaBP8
  JOURNAL   Biochem Biophys Res Commun 380 (4), 825-831 (2009)
   PUBMED   19338761
REFERENCE   4  (bases 1 to 1443)
  AUTHORS   Zeitz C, Kloeckener-Gruissem B, Forster U, Kohl S, Magyar I,
            Wissinger B, Matyas G, Borruat FX, Schorderet DF, Zrenner E, Munier
            FL and Berger W.
  TITLE     Mutations in CABP4, the gene encoding the Ca2+-binding protein 4,
            cause autosomal recessive night blindness
  JOURNAL   Am J Hum Genet 79 (4), 657-667 (2006)
   PUBMED   16960802
REFERENCE   5  (bases 1 to 1443)
  AUTHORS   Maeda T, Lem J, Palczewski K and Haeseleer F.
  TITLE     A critical role of CaBP4 in the cone synapse
  JOURNAL   Invest Ophthalmol Vis Sci 46 (11), 4320-4327 (2005)
   PUBMED   16249514
REFERENCE   6  (bases 1 to 1443)
  AUTHORS   Haeseleer F, Imanishi Y, Maeda T, Possin DE, Maeda A, Lee A, Rieke
            F and Palczewski K.
  TITLE     Essential role of Ca2+-binding protein 4, a Cav1.4 channel
            regulator, in photoreceptor synaptic function
  JOURNAL   Nat Neurosci 7 (10), 1079-1087 (2004)
   PUBMED   15452577
COMMENT     PROVISIONAL REFSEQ: This record has not yet been subject to final
            NCBI review. The reference sequence was derived from CH473953.1.
            
            On or before Oct 4, 2007 this sequence version replaced
            XM_001068353.1, XM_344981.1.
            
            ##Evidence-Data-START##
            RNAseq introns :: mixed sample support SAMD00132300, SAMEA5760383
                              [ECO:0006172]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on conservation, expression
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..1443
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /db_xref="taxon:10116"
                     /chromosome="1"
                     /map="1q43"
     gene            1..1443
                     /gene="Cabp4"
                     /note="calcium binding protein 4"
                     /db_xref="GeneID:365394"
                     /db_xref="RGD:1306083"
     exon            1..411
                     /gene="Cabp4"
                     /inference="alignment:Splign:2.1.0"
     CDS             58..873
                     /gene="Cabp4"
                     /codon_start=1
                     /product="calcium-binding protein 4"
                     /protein_id="NP_001102396.1"
                     /db_xref="GeneID:365394"
                     /db_xref="RGD:1306083"
                     /translation="MATEHSAQLAPAPQKIPKGAVPPRSAAEDPALTRRRSKKENWHP
                     GTQKASSEEQSFSQSSEASGSSKNSSRTKVGQEEPSSAPTRQASHRQSHRHRSDPQQD
                     AAQRTYGPLLNRMFGKDRELGPEELEELQAAFEEFDTDQDGYIGHRELGDCMRTLGYM
                     PTEMELLEVSQHVKMRMGGFVDFEEFVELISPKLREETAHMLGVRELRIAFREFDKDR
                     DGRITVAELRQAAPALLGEPLEGTELDEMLRDMDLNGDGTIDFDEFVMMLSTG"
     exon            412..442
                     /gene="Cabp4"
                     /inference="alignment:Splign:2.1.0"
     exon            443..586
                     /gene="Cabp4"
                     /inference="alignment:Splign:2.1.0"
     exon            587..696
                     /gene="Cabp4"
                     /inference="alignment:Splign:2.1.0"
     exon            697..844
                     /gene="Cabp4"
                     /inference="alignment:Splign:2.1.0"
     exon            845..1443
                     /gene="Cabp4"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 gagaagcaag ggcaggcact ctagggagct acatctctga gtcttgccat cttctacatg
       61 gcaacagagc acagtgcaca gctggctcct gccccccaga agatccctaa aggagctgtt
      121 cctccaagga gtgctgctga agaccctgcc ttgaccagga gaagaagcaa gaaggagaat
      181 tggcacccag ggacccagaa agccagttct gaggaacagt cctttagcca gagctctgag
      241 gcctcaggaa gcagcaagaa ctcctcaagg accaaagtgg ggcaggagga accatcctca
      301 gcacctaccc ggcaagcctc tcaccgacag tcccaccgac accgttctga ccctcaacag
      361 gatgctgccc aaaggactta tgggcccctg ctcaaccgca tgtttggaaa ggaccgtgag
      421 ctgggccctg aggagttgga agagctccag gctgcctttg aggagtttga cactgaccag
      481 gatggctaca tcggccaccg ggaactaggt gactgcatgc ggactctggg ctacatgccc
      541 acggagatgg agctgctcga agtgtcccag cacgtgaaga tgcgcatggg gggctttgtg
      601 gattttgaag agtttgtgga actgataagc cccaaactga gggaggagac agctcacatg
      661 ctgggtgtgc gggagctgcg gatcgccttc cgagagtttg acaaggacag agatggacgg
      721 atcacagtgg cggagctgcg gcaggcagca cccgctctgc tgggggaacc actagagggc
      781 actgaactgg atgagatgtt gagagacatg gacctcaatg gcgatggcac tatagacttt
      841 gacgagtttg taatgatgct atctacaggc tgaggcacct tcagggacaa catactgccc
      901 ctgggggcca agacagcagc aggaaccagg ctatgcaagg gagagatacc cctcccctaa
      961 cccctagggt actttacctc tgaccacacc cgactccagg gtctgcctgt gctatcttct
     1021 cctcccaccc ccaaactgtg gaggggaaaa aaattgaagc tggttgcagc tctcactgga
     1081 gaacaagatt tgaatttctt tagatcctgg agtggtaggg ggctcccctg caccatctgc
     1141 attcaaacaa atgaggcaca gtgccctgag ggggattcct aggatgcagt gaatggagag
     1201 ggggacttga tcacttccca ctacttgtgt gtacaaagtg ttgtttttga aaaatgaact
     1261 tgggcctggt aatggcttac caggtaaaat ttttggttcc caagcctgaa ctggatccct
     1321 gaagcttgtg aggtgggaga gagccaactt cacaaagttg ttctctggta tgctaacgtt
     1381 ctatcccccc acccccaccc cactcctacc atgaataaat aaataaatga aaattgaatc
     1441 tga
//
