LOCUS       XM_574595                887 bp    mRNA    linear   ROD 11-JUN-2023
DEFINITION  PREDICTED: Rattus norvegicus calcium binding protein 2 (Cabp2),
            transcript variant X4, mRNA.
ACCESSION   XM_574595
VERSION     XM_574595.8
DBLINK      BioProject: PRJNA677964
KEYWORDS    RefSeq.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_051336.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            [WARNING] On Feb 22, 2024 this sequence was replaced by
            XM_574595.9.
            
            On Jan 21, 2021 this sequence version replaced XM_574595.7.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_015227675.2-RS_2023_06
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.1
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 06/06/2023
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..887
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN/NHsdMcwi"
                     /db_xref="taxon:10116"
                     /chromosome="1"
                     /sex="male"
                     /tissue_type="kidney"
                     /geo_loc_name="USA: Wisconsin, Milwaukee, Medical College
                     of Wisconsin"
                     /collection_date="2019-03-08"
                     /collected_by="Rebecca Schilling"
     gene            1..887
                     /gene="Cabp2"
                     /note="calcium binding protein 2; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 11
                     Proteins, and 96% coverage of the annotated genomic
                     feature by RNAseq alignments"
                     /db_xref="GeneID:499298"
                     /db_xref="RGD:1563670"
     CDS             16..681
                     /gene="Cabp2"
                     /codon_start=1
                     /product="calcium-binding protein 2 isoform X3"
                     /protein_id="XP_574595.3"
                     /db_xref="GeneID:499298"
                     /db_xref="RGD:1563670"
                     /translation="MVQRPMGNCAKRPWHRGSKERWQWPGSPLGGSRPSPGPRAEEQE
                     GTQGYSVLGSLVGPACIFLRPSIAATQLNRELRPEEIEELQVAFQEFDRDRDGYIGYR
                     ELGACMRTLGYMPTEMELIEISQQISGGKVDFEDFVELMGPKLLAETADMIGVRELRD
                     AFREFDTNGDGCISVGELRAALKALLGERLSQREVDEILQDIDLNGDGLVDFEEFVRM
                     MSR"
ORIGIN      
        1 gactcaggac ctggcatggt tcagagaccc atggggaact gtgccaagcg gccctggcac
       61 cgggggtcta aggaacgctg gcagtggcct ggatcccccc tagggggctc ccgccccagc
      121 cctggcccca gagctgagga gcaggagggg acacagggct actcagtgct cggcagcctg
      181 gtggggccag catgcatctt cctccgaccc agcatcgccg ctacccagct caaccgagag
      241 ctgagaccag aagagatcga agaactgcag gttgccttcc aggagtttga ccgagaccgg
      301 gatggctaca tcggctaccg ggagctgggt gcctgcatgc ggactctggg ctacatgccc
      361 acggagatgg agctcattga gatatcacag caaatcagtg gtgggaaggt ggattttgaa
      421 gattttgtgg agctgatggg tcccaagctg ctggcagaga cggcagacat gattggcgtg
      481 agggagcttc gagacgcttt ccgggagttt gacaccaacg gggatggctg catcagcgta
      541 ggggagctca gggcagccct caaggctctg ttgggggaac gcctcagcca acgggaagta
      601 gatgagatac tccaagacat tgacctcaat ggagatggcc tggttgactt tgaagaattt
      661 gttcggatga tgtctcggtg aacctgtgta gcagctggag tggacacgcc tggaggatcc
      721 cagcctccga actgcagagg atcctatatg ttctttgaag gtcattgtgt tcaggactgt
      781 gcatctcctc cccataccct gcctgggcac agtgtcctcg cctgtcatca ccccatattt
      841 tgtcctggtt ccgtagcaat aaagcagctc ccagcttgta tattcca
//
